prot_A-nodosum_M_contig1222.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1222.9.1
Unique Nameprot_A-nodosum_M_contig1222.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length133
Homology
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BLAST of mRNA_A-nodosum_M_contig1222.9.1 vs. uniprot
Match: A0A6H5KSZ7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KSZ7_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 5.810e-24
Identity = 63/132 (47.73%), Postives = 79/132 (59.85%), Query Frame = 0 
Query:    1 MRTSTLSAIVGIALSCCKPCAIGFVMPSGRLPSGTSSGTASERHMVNQHPRRGSLRALAAEGKPAKGVGNEEEQGPMDLNLEQMFEVFEAADKEVSDEAVGKKSDSTKPGTGKDPAEAMGDMLSNFFGGGKK 132
            MRTS  S I   +L+C    A  F+ PS  +   +++ T+     +++       RA+    +   G    EEQ PMDL+LEQMFEVFEAADKEVSDE VGKK         KDPAEAMGDMLS+FFGGG+K
Sbjct:    1 MRTSATSFIAAGSLACLSS-ASAFLFPSAAVDLRSAAPTSVASQSISRSSS--GRRAVILFAEKEDGA---EEQEPMDLDLEQMFEVFEAADKEVSDEEVGKKGGKKPAARAKDPAEAMGDMLSSFFGGGEK 126
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BLAST of mRNA_A-nodosum_M_contig1222.9.1 vs. uniprot
Match: A0A835YKL6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKL6_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 1.510e-6
Identity = 28/55 (50.91%), Postives = 35/55 (63.64%), Query Frame = 0 
Query:   78 DLNLEQMFEVFEAADKEVSDEAVGKKSDSTKPGTGKDPAEAMGDMLSNFFGGGKK 132
            DLNLE MFEVF+ ADK +SD+ VGK         GKD  + + DML + FGG K+
Sbjct:    9 DLNLEDMFEVFDKADKSISDKEVGKAG-------GKDAGKDIADMLGSLFGGKKE 56
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1222.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSZ7_9PHAE5.810e-2447.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YKL6_9STRA1.510e-650.91Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 30..44
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..132
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 87..110
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1222contigA-nodosum_M_contig1222:119379..121620 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1222.9.1mRNA_A-nodosum_M_contig1222.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1222 118699..121620 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1222.9.1 ID=prot_A-nodosum_M_contig1222.9.1|Name=mRNA_A-nodosum_M_contig1222.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=133bp
MRTSTLSAIVGIALSCCKPCAIGFVMPSGRLPSGTSSGTASERHMVNQHP
RRGSLRALAAEGKPAKGVGNEEEQGPMDLNLEQMFEVFEAADKEVSDEAV
GKKSDSTKPGTGKDPAEAMGDMLSNFFGGGKK*
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