prot_A-nodosum_M_contig1218.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1218.14.1
Unique Nameprot_A-nodosum_M_contig1218.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length245
Homology
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE)

HSP 1 Score: 323 bits (829), Expect = 2.490e-109
Identity = 157/244 (64.34%), Postives = 195/244 (79.92%), Query Frame = 0
Query:    1 MKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 244
            MKHTTP G+ VT+KSEH+KGV+  LEAKFFH KSG++ID+AKLNPDGSMGLEAS + IAK+V+L+AKVNDVLKGE+S+E T  K S+ AT+D+EG W++ S+C+AVGS+LLVG   +  VG  K   LK+YSVGAATGG RWGASLTCTN +QT+NASG+Y+L PN++ SV+AV TPEKSE SF+ G++YQ  P TT RAKVNS G+  AC V + A K+AVTVT   A  DT PKFG+ C+LG
Sbjct:    1 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKVNDVLKGEVSMEHTVGKSSTRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTYNASGFYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKVNSNGLVQACAVNRCADKVAVTVTAAAAKNDTTPKFGLLCALG 244          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI)

HSP 1 Score: 325 bits (834), Expect = 5.740e-109
Identity = 157/244 (64.34%), Postives = 195/244 (79.92%), Query Frame = 0
Query:    1 MKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 244
            MKHTTP G+ VT+KSEH+KGV+  LEAKFFH KSG++ID+AKLNPDGSMGLEAS + +AK+V+L+AKVNDVLKGE+S+E T  K SS AT+D+EG W++ S+C+AVGS+LLVG   +  VG  K   LK+YSVGAATGG RWGASLTCTN +QTFNASGYY+L PN++ SV+AV TPEKSE SF+ G++YQ  P TT RAK+NS G+  AC V + A K+A+TVT   A  DT PKFG+ C+LG
Sbjct:   77 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTAAAAKNDTTPKFGLLCALG 320          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA)

HSP 1 Score: 168 bits (425), Expect = 9.070e-48
Identity = 90/246 (36.59%), Postives = 139/246 (56.50%), Query Frame = 0
Query:    1 MKHTTPDGLAVTSKSEHN--KGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 244
            +KHTTP  +A T+++EH    GV+  L+ K+ H+ SG ++D+  L PDG   +E S+ G+A+ ++L AK+ND +KG++  E    +M+    V+ E T +  SS  A    +  GG V + + GDK   L  Y+ G + GG  W  +LT +NK+ T+N S  Y    N+  +VLA  TPE    +   G+KYQ  P T  RAK+ S+G+  A +  K    ++V V  ++   D +PKFG  C+LG
Sbjct:   30 LKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKIT-SSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA)

HSP 1 Score: 152 bits (383), Expect = 1.690e-41
Identity = 86/245 (35.10%), Postives = 129/245 (52.65%), Query Frame = 0
Query:    1 MKHTTPDGLAVTSKSEHNKGVSSG-LEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 244
            +KHTTP  +  T ++EH     +G ++ K+ H+ SG  +D+  +  +G+  +E S+ G+A  ++L AKV+D +KG++  E      +    +D+E T +  S+  A    +  GG + + + GDK   L  Y+ G A GG  W  +LT TNK+ T+N S  Y    NV A VLA  TPE    S   G KY   P+TT RAK  S G+  A V  K    + +    +V   D +PKFG  C+LG
Sbjct:   30 VKHTTPHNVNFTIENEHKGSAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKVDDAIKGDVGAEYVGAGFAIKTDMDVEATKMVTSATAAY-EGVNAGGIISAKLPGDKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATYAPAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQPKFGFNCTLG 273          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: B7GDE6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDE6_PHATC)

HSP 1 Score: 85.1 bits (209), Expect = 4.340e-16
Identity = 73/244 (29.92%), Postives = 123/244 (50.41%), Query Frame = 0
Query:    2 KHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKG-EMSVEVTKPKMSSTATVDI-EGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAA-TGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADT---KPKFGV 239
            K+  P  + + +    +  ++S +  KF + K    +D+ ++  DG   LE S+K +  +V+L    +   KG ++ V+ TK     T  +D+ + + V  S+C  + S L VGGD    + G K   L  ++VGA+ T GP +  SLT ++K         Y +N +++ +   V T  K       G  ++A P  T +AK NS GV SAC++++ APK+ +T +G V  AD    KP F +
Sbjct:   30 KNAGPVAVTIETTRGDDGALTSKVGTKFAYAK--FNVDKGQIKADGGRVLETSLK-VTPEVKLSFLAS---KGADLGVDYTKGNFYGTGVLDVMDMSLVSTSACYGLNSGLKVGGDAAYNLSGSK--GLSGFNVGASYTAGPLF-TSLTVSSK-SAATIGLLYKVNSDLMLASQTVHTSNKVCDVLGVGAAFKA-PVGTIKAKFNSGGVVSACLIREIAPKVVMTASGSVTGADFSTFKPGFQI 262          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A812RZT6_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RZT6_SYMMI)

HSP 1 Score: 78.2 bits (191), Expect = 1.020e-13
Identity = 69/241 (28.63%), Postives = 110/241 (45.64%), Query Frame = 0
Query:   11 VTSKSEHNKGVSSGLEAKF---FHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDI-EGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATG-GPRWGASLTCTNKLQTFNAS-GYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKP-KFGVTCSLG 244
            +T+ ++ N G    L  K    +   SG  +D+ ++  +GS+ +E S+  +A  V+   K +D  K ++ V+      ++    D+ E + V AS  V  GS    GG   +   GD+  DL  +   A+        A L  TNK   +  S GY+      +A V    TPEKS      G  Y+  PDTT +AK +S GV    V Q  +   ++T   QV ++D    K G++ S+G
Sbjct:    2 LTTTTDCNCGAKCSLGGKVSARWAHPSGFNLDKLEVKGNGSVAVETSLTDVAPGVKFEFKGDDQCKSDLGVQYKHEMATANVEFDVAEFSAVNAS--VLAGSGAFTGGASTTLTLGDRM-DLTRFDFAASYSVAKELFAGLHITNKFSKYALSLGYFACPKYQLAGVFNF-TPEKSATHLVFGGSYKCNPDTTVKAKADSDGVLGLSVKQMLSSNCSITTAAQVPSSDFSAYKLGISGSIG 238          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A2N9H415_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9H415_FAGSY)

HSP 1 Score: 56.2 bits (134), Expect = 4.490e-6
Identity = 38/106 (35.85%), Postives = 59/106 (55.66%), Query Frame = 0
Query:  144 ASLTCTNKLQTFNASGYYLLNP---NVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTK--PKFGVTCSLG 244
            ASLT  +KL ++ AS YY++NP     I + L  A  +       GG ++   P T  +A++N+ G ASA V Q+   K+A+T+ G+V   D K  PK G++ + G
Sbjct:   89 ASLTLHDKLDSWKASCYYVMNPLTNTAIGAELKYAISDNYGAITVGG-QHALFPYTLMKARLNTYGRASALVQQELWEKLALTIAGEVDFMDIKELPKIGLSIAFG 193          
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A7N2MQ63_QUELO (Uncharacterized protein n=3 Tax=Fagaceae TaxID=3503 RepID=A0A7N2MQ63_QUELO)

HSP 1 Score: 55.8 bits (133), Expect = 1.030e-5
Identity = 35/104 (33.65%), Postives = 55/104 (52.88%), Query Frame = 0
Query:  144 ASLTCTNKLQTFNASGYYLLNP--NVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTK--PKFGVTCSL 243
            ASLT  +KL ++ AS YY++NP  N         T   S+ +   G ++   P T  +A++N+ G A A + Q F  K+A+TV G+V   D    PK G++ + 
Sbjct:  137 ASLTLHDKLDSWKASCYYVMNPLTNTAIGAELKHTFSNSDSAITVGGQHALFPSTLMKARINTYGRAGALIQQVFWEKLALTVAGEVDFMDINETPKIGLSIAF 240          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5L9E4_9PHAE2.490e-10964.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LG27_ECTSI5.740e-10964.34Voltage dependent anion channel n=1 Tax=Ectocarpus... [more]
A0A835YRG3_9STRA9.070e-4836.59Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
A0A835YZM2_9STRA1.690e-4135.10Voltage dependent anion channel n=1 Tax=Tribonema ... [more]
B7GDE6_PHATC4.340e-1629.92Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A812RZT6_SYMMI1.020e-1328.63Hypothetical protein n=1 Tax=Symbiodinium microadr... [more]
A0A2N9H415_FAGSY4.490e-635.85Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A7N2MQ63_QUELO1.030e-533.65Uncharacterized protein n=3 Tax=Fagaceae TaxID=350... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027246Eukaryotic porin/Tom40PFAMPF01459Porin_3coord: 8..238
e-value: 2.7E-21
score: 76.3
IPR023614Porin domain superfamilyGENE3D2.40.160.10Porincoord: 1..244
e-value: 9.9E-34
score: 119.0
IPR001925Porin, eukaryotic typePANTHERPTHR11743VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNELcoord: 3..243
NoneNo IPR availablePANTHERPTHR11743:SF23GH26960P-RELATEDcoord: 3..243

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1218contigA-nodosum_M_contig1218:132292..140123 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1218.14.1mRNA_A-nodosum_M_contig1218.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1218 131174..141158 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1218.14.1 ID=prot_A-nodosum_M_contig1218.14.1|Name=mRNA_A-nodosum_M_contig1218.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=245bp
MKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMG
LEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKA
SSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTN
KLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRA
KVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027246Porin_Euk/Tom40
IPR023614Porin_dom_sf
IPR001925Porin_Euk