mRNA_A-nodosum_M_contig1218.14.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: D8LG27_ECTSI (Voltage dependent anion channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG27_ECTSI) HSP 1 Score: 347 bits (891), Expect = 9.090e-110 Identity = 168/257 (65.37%), Postives = 207/257 (80.54%), Query Frame = 2
Query: 653 ILFDDYSLKRTLKMKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 1423
IL DDY+LKRTLKMKHTTP G+ VT+KSEH+KGV+ LEAKFFH KSG++ID+AKLNPDGSMGLEAS + +AK+V+L+AKVNDVLKGE+S+E T K SS AT+D+EG W++ S+C+AVGS+LLVG + VG K LK+YSVGAATGG RWGASLTCTN +QTFNASGYY+L PN++ SV+AV TPEKSE SF+ G++YQ P TT RAK+NS G+ AC V + A K+A+TVT A DT PKFG+ C+LG
Sbjct: 64 ILSDDYNLKRTLKMKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDVAKNVKLVAKVNDVLKGEVSMEHTVGKSSSRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTFNASGYYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKMNSNGLVQACAVNRCADKVAITVTAAAAKNDTTPKFGLLCALG 320
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A6H5L9E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9E4_9PHAE) HSP 1 Score: 323 bits (827), Expect = 2.020e-101 Identity = 157/244 (64.34%), Postives = 195/244 (79.92%), Query Frame = 2
Query: 692 MKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 1423
MKHTTP G+ VT+KSEH+KGV+ LEAKFFH KSG++ID+AKLNPDGSMGLEAS + IAK+V+L+AKVNDVLKGE+S+E T K S+ AT+D+EG W++ S+C+AVGS+LLVG + VG K LK+YSVGAATGG RWGASLTCTN +QT+NASG+Y+L PN++ SV+AV TPEKSE SF+ G++YQ P TT RAKVNS G+ AC V + A K+AVTVT A DT PKFG+ C+LG
Sbjct: 1 MKHTTPHGVTVTAKSEHSKGVNGALEAKFFHAKSGVSIDKAKLNPDGSMGLEASRRDIAKNVKLVAKVNDVLKGEVSMEHTVGKSSTRATLDVEGNWMRTSTCMAVGSSLLVGAQGDFIVGAPKDSALKSYSVGAATGGSRWGASLTCTNAMQTYNASGFYILQPNLVGSVMAVTTPEKSETSFEAGVRYQCNPKTTVRAKVNSNGLVQACAVNRCADKVAVTVTAAAAKNDTTPKFGLLCALG 244
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A835YRG3_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRG3_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.420e-50 Identity = 100/259 (38.61%), Postives = 150/259 (57.92%), Query Frame = 2
Query: 653 ILFDDYSLKRTLKMKHTTPDGLAVTSKSEHN--KGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 1423
+L DDYSLK TLK+KHTTP +A T+++EH GV+ L+ K+ H+ SG ++D+ L PDG +E S+ G+A+ ++L AK+ND +KG++ E +M+ V+ E T + SS A + GG V + + GDK L Y+ G + GG W +LT +NK+ T+N S Y N+ +VLA TPE + G+KYQ P T RAK+ S+G+ A + K ++V V ++ D +PKFG C+LG
Sbjct: 17 LLTDDYSLKNTLKLKHTTPHAVAFTAENEHKGASGVAGKLQLKYAHKPSGFSLDKVVLGPDGGTSVECSLAGVAEGLKLTAKINDAIKGDVGTEFVGARMALKTEVNTELTKIT-SSATAAYDGVNAGGIVIAKLPGDKPAALSDYNAGLSYGGTGWFTALTTSNKMATYNVSASYAPAANLTTAVLASTTPESGAQTVTVGLKYQCNPATVLRAKMTSEGMVHAAMQNKCCEGVSVGVATEMNTKDMQPKFGFNCTLG 274
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A835YZM2_9STRA (Voltage dependent anion channel n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZM2_9STRA) HSP 1 Score: 171 bits (434), Expect = 1.670e-44 Identity = 95/258 (36.82%), Postives = 141/258 (54.65%), Query Frame = 2
Query: 653 ILFDDYSLKRTLKMKHTTPDGLAVTSKSEHNKGVSSG-LEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKPKFGVTCSLG 1423
+L DD+SLKRT+K+KHTTP + T ++EH +G ++ K+ H+ SG +D+ + +G+ +E S+ G+A ++L AKV+D +KG++ E + +D+E T + S+ A + GG + + + GDK L Y+ G A GG W +LT TNK+ T+N S Y NV A VLA TPE S G KY P+TT RAK S G+ A V K + + +V D +PKFG C+LG
Sbjct: 17 LLTDDFSLKRTVKVKHTTPHNVNFTIENEHKGSAVAGKVQLKYAHKPSGFALDKVTIAQNGAKTVECSLAGLAPGLKLTAKVDDAIKGDVGAEYVGAGFAIKTDMDVEATKMVTSATAAY-EGVNAGGIISAKLPGDKPAALSDYNAGVAYGGTGWFTALTTTNKMATYNLSATYAPAKNVTAVVLASLTPETGAQSVVVGTKYVCNPNTTLRAKATSDGMLHAAVQHKCTQGLIIGAATEVNAKDMQPKFGFNCTLG 273
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: B7GDE6_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GDE6_PHATC) HSP 1 Score: 92.4 bits (228), Expect = 4.850e-17 Identity = 79/259 (30.50%), Postives = 130/259 (50.19%), Query Frame = 2
Query: 653 ILFDDYSLKRTLKMKHTT-PDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKG-EMSVEVTKPKMSSTATVDI-EGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAA-TGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADT---KPKFGV 1408
+L DDY+ LK K P + + + + ++S + KF + K +D+ ++ DG LE S+K + +V+L + KG ++ V+ TK T +D+ + + V S+C + S L VGGD + G K L ++VGA+ T GP + SLT ++K Y +N +++ + V T K G ++A P T +AK NS GV SAC++++ APK+ +T +G V AD KP F +
Sbjct: 15 LLNDDYTSSVVLKAKKNAGPVAVTIETTRGDDGALTSKVGTKFAYAK--FNVDKGQIKADGGRVLETSLK-VTPEVKLSFLAS---KGADLGVDYTKGNFYGTGVLDVMDMSLVSTSACYGLNSGLKVGGDAAYNLSGSK--GLSGFNVGASYTAGPLF-TSLTVSSK-SAATIGLLYKVNSDLMLASQTVHTSNKVCDVLGVGAAFKA-PVGTIKAKFNSGGVVSACLIREIAPKVVMTASGSVTGADFSTFKPGFQI 262
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A812RZT6_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812RZT6_SYMMI) HSP 1 Score: 77.8 bits (190), Expect = 2.930e-12 Identity = 69/241 (28.63%), Postives = 110/241 (45.64%), Query Frame = 2
Query: 722 VTSKSEHNKGVSSGLEAKF---FHEKSGITIDRAKLNPDGSMGLEASMKGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTATVDI-EGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATG-GPRWGASLTCTNKLQTFNAS-GYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKP-KFGVTCSLG 1423
+T+ ++ N G L K + SG +D+ ++ +GS+ +E S+ +A V+ K +D K ++ V+ ++ D+ E + V AS V GS GG + GD+ DL + A+ A L TNK + S GY+ +A V TPEKS G Y+ PDTT +AK +S GV V Q + ++T QV ++D K G++ S+G
Sbjct: 2 LTTTTDCNCGAKCSLGGKVSARWAHPSGFNLDKLEVKGNGSVAVETSLTDVAPGVKFEFKGDDQCKSDLGVQYKHEMATANVEFDVAEFSAVNAS--VLAGSGAFTGGASTTLTLGDRM-DLTRFDFAASYSVAKELFAGLHITNKFSKYALSLGYFACPKYQLAGVFNF-TPEKSATHLVFGGSYKCNPDTTVKAKADSDGVLGLSVKQMLSSNCSITTAAQVPSSDFSAYKLGISGSIG 238
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: W7U0F0_9STRA (Voltage-dependent anion-selective channel n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0F0_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 1.680e-7 Identity = 28/67 (41.79%), Postives = 43/67 (64.18%), Query Frame = 2
Query: 653 ILFDDYSLKRTLKMKHTTPDGLAVTSKSEHNK-----GVSSGLEAKFFHEKSGITIDRAKLNPDGSM 838
IL DDYSLKRTLK+KH TPDG+AVT+++E + + + K+ H +G ++D+ +L G +
Sbjct: 19 ILNDDYSLKRTLKVKHVTPDGVAVTTENELTGKDGKFDLKAKISGKYKHAATGFSVDKLQLKETGGL 85
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A067C5C1_SAPPC (Uncharacterized protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C5C1_SAPPC) HSP 1 Score: 63.9 bits (154), Expect = 2.520e-7 Identity = 68/272 (25.00%), Postives = 121/272 (44.49%), Query Frame = 2
Query: 656 LFDDYSLKRTLKMKHTTPDGLAVTSKSE--HNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASM-KGIAKDVRLLAKVNDVLK-------GEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALL---VGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQV--ANADTKP-KFGVTCSLG 1423
L DDY R LK+K T +G+ T++ NK + + L A F H SGI + ++ G + EA + + +++L K+ D G + + + S +T+D G+ V + + +L G +E + D + Y V + A+L + AS + +N +VI S + + + ++ G +Y+A +TT+ AK+NS+G S + K P +++T + Q+ N D KFG +LG
Sbjct: 17 LNDDYDFNRKLKVKTKTTNGVTFTTEGALAANKTILAKLGASFNHS-SGINFTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGANKGSARQVGSVEAKYVQDNFSIHSTLDFAGSNVSNAGVFHYENFVLGANTGFSLEKSAISDYGGAI-GYKVAD------FEATLLAKKLCKNLTASFSHAVNKDVIYSAVFDHDSKTAGNTLTVGGRYKANAETTYLAKINSEGFVSIASINKLRPYVSLTTSAQIDAKNFDGDAHKFGFGITLG 280
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A6G0XI49_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XI49_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 5.950e-7 Identity = 63/267 (23.60%), Postives = 122/267 (45.69%), Query Frame = 2
Query: 656 LFDDYSLKRTLKMKHTTPDGLAVTSKSE--HNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASM-KGIAKDVRLLAKVNDVLK-----GEMSVEVTKPKMSSTATVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQVANADTKP---KFGVTCSLG 1423
+ DDY R LK+K + +G+ T++ NK + + L A F H SG+ + + ++ G + EA + I +++L K D K G + ++ + ++ T+D G+ V + S +L GG ++ +KQ + Y + AS+ + S + + +V + + + ++ G +Y+A DTT+ AK++S+G+ S +QK P +++T + QV + + KFG +LG
Sbjct: 17 ISDDYDFSRKLKVKTKSANGVTFTTEGSLAANKSILAKLGAAFNHS-SGLNVSKLQVTTQGRLIAEADIANAIIDNLKLGFKFEDGGKNAKQVGTVELKYVQDAFTAHTTIDAAGSNVTQNGVFHYESFIL-GGTTSFSL--EKQA-VSDYGGALGYKDSDFEASIVAKKLCKNLVTSFVHTPSQDVTYAAVYDFDSKTGGNTLTVGGRYKADKDTTYLAKIDSEGILSLASIQKLRPFVSLTTSAQVDVKNFEGDAHKFGFGITLG 278
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Match: A0A485K6L5_9STRA (Aste57867_1581 protein n=3 Tax=Aphanomyces TaxID=100860 RepID=A0A485K6L5_9STRA) HSP 1 Score: 62.4 bits (150), Expect = 7.970e-7 Identity = 69/267 (25.84%), Postives = 119/267 (44.57%), Query Frame = 2
Query: 656 LFDDYSLKRTLKMKHTTPDGLAVTSKSE--HNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGLEASM-KGIAKDVRLLAKVNDVLKGEMSVEVTKPKMSSTA-----TVDIEGTWVKASSCVAVGSALLVGGDVESTVGGDKQPDLKAYSVGAATGGPRWGASLTCTNKLQTFNASGYYLLNPNVIASVLAVATPEKSEHSFQGGMKYQAKPDTTFRAKVNSQGVASACVVQKFAPKMAVTVTGQV--ANADTKP-KFGVTCSLG 1423
+ DDY R LK+K + +G+ T++ NK + + L A F H SG+ + + ++ G + EA + + +++L K+ D K V K A +D+ G V + + +VGG ++ +KQ + Y A + ASL + AS + + +V S + + ++ G +Y A DTT+ AKV+S+G+ S +QK P +++T + QV N D KFG +LG
Sbjct: 17 INDDYDFSRKLKVKTKSANGVTFTTEGALAANKSILAKLGASFNHS-SGLNVTKLQVTTQGRLIGEAEIANALVDNLKLGFKLEDGGKNAKQVATVDLKYVQDAFTAHTEIDVAGNNVTQNGVFHYEN-FVVGGTSSFSL--EKQ-SVSDYGGALAYKDADFEASLLAKKFCKNLVASFVHTPSKDVTYSAVYDFDSKTGANNLTVGGRYTADKDTTYLAKVDSEGILSLASIQKLRPFVSLTTSAQVDVKNFDGDAHKFGFGVTLG 278 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.14.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1218.14.1 >prot_A-nodosum_M_contig1218.14.1 ID=prot_A-nodosum_M_contig1218.14.1|Name=mRNA_A-nodosum_M_contig1218.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=245bp MKHTTPDGLAVTSKSEHNKGVSSGLEAKFFHEKSGITIDRAKLNPDGSMGback to top mRNA from alignment at A-nodosum_M_contig1218:131174..141158+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1218.14.1 ID=mRNA_A-nodosum_M_contig1218.14.1|Name=mRNA_A-nodosum_M_contig1218.14.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9985bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:131174..141158+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1218:131174..141158+ >mRNA_A-nodosum_M_contig1218.14.1 ID=mRNA_A-nodosum_M_contig1218.14.1|Name=mRNA_A-nodosum_M_contig1218.14.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=735bp|location=Sequence derived from alignment at A-nodosum_M_contig1218:131174..141158+ (Ascophyllum nodosum dioecious)back to top |