prot_A-nodosum_M_contig1218.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1218.1.1
Unique Nameprot_A-nodosum_M_contig1218.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length222
Homology
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: D7FUB6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUB6_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 9.710e-48
Identity = 117/227 (51.54%), Postives = 143/227 (63.00%), Query Frame = 0
Query:    2 ATDGGAIYTAAGYDEVVKSSFTRNFAAVQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSFFCASGKYGLEKNSDEVEDPDSCHWGVVCSRCTDH-CGAPAGID-----MDETTVPVCEVVPEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGGSNAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQGYNKWAAVG 222
            A DGGA Y+AAGYD V   SF  NFAA+ GG            XXXXXXXXXXXXXXXXXXXX            N+F+CA G+YG + +  + E  D+C   VVCSRC    C     +D     +++  VP C+ V  GVN +GN+G  L+TLDL SG+YRTS +S  I+EC+RE+AC GGS AG YCA GY G YCAAC +GY SG QYSC+SC G N  +A+G
Sbjct:  236 ADDGGAFYSAAGYDLVQDCSFQANFAALSGGALLHSGVLVGVHXXXXXXXXXXXXXXXXXXXXIAENFTDVTFAENTFYCAPGQYGSDAHFLDEEVADTCRLEVVCSRCVSSPCEDDDMLDNGISVLEDNVVPHCKAVAVGVNVSGNAGTTLQTLDLESGYYRTSAESDIILECHREEACVGGSTAGEYCATGYQGAYCAACEEGYASGLQYSCKSCGGDNATSAIG 462          
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: A0A6H5JWI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI3_9PHAE)

HSP 1 Score: 155 bits (392), Expect = 7.190e-40
Identity = 81/223 (36.32%), Postives = 117/223 (52.47%), Query Frame = 0
Query:    2 ATDGGAIYTAAGYDEVVKSSFTRNFAAVQGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSFFCASGKYGLEKNSDEVEDPDSCHWGVVCSRCTDHCGAPAG--IDMDETTVPVCEVVPEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGGSNAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQGYNKWAAVG 222
            A DGGA+Y+AAGYD +    F  N A   GG                                            N+++C+SG+YG E    E E   +C +GVVCS C   C    G  + +++  VP+CE    GV+T+G+ G+ L  L+L+ G+YRTS +S  +++CY+E+AC GG++  +YC EGY G YCA C +GY SG+Q+SC  C G N  +A+G
Sbjct:  463 AVDGGAMYSAAGYDGIKDCRFEDNLAVGSGGAYLHSGVLVELDRSTFVGNRARDAGLAVQSLGIAGNITDTTFESNTYYCSSGQYGYEYEIGEDEVSGTCRFGVVCSSCAASCEDNPGSVVVVNDAHVPICETAMTGVDTSGDGGVTLPELNLLRGYYRTSAESQNVLKCYQEEACIGGTDVSQYCQEGYRGAYCAVCDEGYASGYQFSCSICDGENLRSAIG 685          
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: D7FTT9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTT9_ECTSI)

HSP 1 Score: 135 bits (339), Expect = 9.670e-33
Identity = 67/150 (44.67%), Postives = 90/150 (60.00%), Query Frame = 0
Query:   77 NSFFCASGKYGLEK--NSDEVEDPDSCHWGVVCSRCTDHCGAP---AGIDMDETTVPVCEVVPEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGGSNAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQGYNKWAAV 221
            N F+C  G++G E   + D     D C +G VCSRC   C +    A   +D  T+P CE  PEG  TT   G  L TL+++ GFYR+S  S +I EC+ ++AC+GGS  G YCAEGY GPYCA C  GY  G+  +C+SC G +K +A+
Sbjct:  514 NDFYCEEGEFGTETLIDKDLFGGADQCRFGRVCSRCASECDSELESAAELVDAETLPTCEEAPEGSRTT-RRGATLATLEILPGFYRSSETSTDIRECFHKQACEGGSAVGTYCAEGYIGPYCAVCSAGYSPGYSRTCKSCMGDSKKSAL 662          
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: A0A6H5L324_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L324_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 2.430e-32
Identity = 66/150 (44.00%), Postives = 88/150 (58.67%), Query Frame = 0
Query:   77 NSFFCASGKYGLEK--NSDEVEDPDSCHWGVVCSRCTDHCGAPAGID---MDETTVPVCEVVPEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGGSNAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQGYNKWAAV 221
            N F+C  G++G E   + D     D C +  VCSRC   CG+        +D  T+P CE  PEG  TT   G  L TL+++ GFYR+S  S +I EC+ +KAC GGS  G YC+EGY GPYCA C  GY  G+  +C+SC G +K +A+
Sbjct:  490 NDFYCEEGEFGTETLIDKDLFGGADQCRFRRVCSRCASECGSELERTAELVDADTLPTCETAPEGSRTT-RRGATLATLEVLPGFYRSSETSTDIRECFHKKACDGGSAIGTYCSEGYIGPYCAVCAAGYSPGYSRTCKSCMGNSKKSAL 638          
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: D8LRF7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF7_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 6.310e-12
Identity = 44/118 (37.29%), Postives = 63/118 (53.39%), Query Frame = 0
Query:  113 HCGAPAGIDMDETTVPVCEVV---PEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGG------SNAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQGYNKWAAV 221
            +C A       ET+  +C  V   PEG++   + G  LETL L  G++R++  S  I EC+ + AC G       S+   YC  GY GPYCA C+ GY +G  ++C SC G + WA +
Sbjct:  421 YCNAGQYWVASETSCMMCADVALNPEGLSC-DSEGTLLETLPLAEGYWRSTETSTNIRECFNDDACIGSEVSQRISSPNDYCDTGYMGPYCAVCMDGYTTGVSHTCHSCDG-SYWAGM 536          
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Match: A0A7S2QV68_9STRA (Hypothetical protein (Fragment) n=1 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QV68_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 3.020e-8
Identity = 37/87 (42.53%), Postives = 49/87 (56.32%), Query Frame = 0
Query:  130 CEVVPEGVNTTGNSGMKLETLDLMSGFYRTSNKSGEIVECYREKACKGGS--NAGRYCAEGYAGPYCAACVKGYGSGFQYSCRSCQG 214
            C  + EG+N    S MKLE++ L  GF+RT+  S ++ EC  EKACKGG+  NA   C EG+ GPYC     G+       C  C+G
Sbjct:  124 CVPIVEGMNP-HMSNMKLESVWLDPGFWRTNGGSSDVRECITEKACKGGNATNATDICREGHEGPYCXXXXXGWTKTAFSICEQCRG 209          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1218.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FUB6_ECTSI9.710e-4851.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JWI3_9PHAE7.190e-4036.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTT9_ECTSI9.670e-3344.67Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L324_9PHAE2.430e-3244.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRF7_ECTSI6.310e-1237.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2QV68_9STRA3.020e-842.53Hypothetical protein (Fragment) n=1 Tax=Triparma p... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 3..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1218contigA-nodosum_M_contig1218:25214..26733 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1218.1.1mRNA_A-nodosum_M_contig1218.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1218 24809..26733 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1218.1.1 ID=prot_A-nodosum_M_contig1218.1.1|Name=mRNA_A-nodosum_M_contig1218.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=222bp
MATDGGAIYTAAGYDEVVKSSFTRNFAAVQGGALLHSGVLVALTECTFES
NTAGEDGLAVMSLGMVNNITDLTFRNNSFFCASGKYGLEKNSDEVEDPDS
CHWGVVCSRCTDHCGAPAGIDMDETTVPVCEVVPEGVNTTGNSGMKLETL
DLMSGFYRTSNKSGEIVECYREKACKGGSNAGRYCAEGYAGPYCAACVKG
YGSGFQYSCRSCQGYNKWAAVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence