prot_A-nodosum_M_contig121.63.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig121.63.1
Unique Nameprot_A-nodosum_M_contig121.63.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1479
Homology
BLAST of mRNA_A-nodosum_M_contig121.63.1 vs. uniprot
Match: A0A6H5KYX0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 9.010e-71
Identity = 297/781 (38.03%), Postives = 392/781 (50.19%), Query Frame = 0
Query:   12 RDSGETARSECVLGLLESTPSPGGSGSVLDQSIADGSALKAQKTLAPVIHKVRET----DATELAKPVSAMPDPAARRRTCAPGDFESIIGDLSPSGSSAPSDPTAERLEEMY-------------------PSSTPAPSSSPSARNFKISSSKSSAGSSSSLGDPVQSTTLTGKQRQPRVNDSSLAGDDANKKNKLDKRNRRATASPSSLNNLMEDLGLDAVALGKSGQDVDLPSSTNSHGGSSSSNSSPSLAPK---------GALEVPPPEVK-TPSPPMVRRTQLKSP-TRGQREIGD-NTSSPR---AAAQKRTSEAVSPAKPSNVDLRPTPQPESARGRLKSCLSSRKRTRGPQLGSAAFDA-----PAIGKPDTPDH----GPSCAVGSPPAAMRDVVKTPGGPV-QGALSGMSVQ-----------REP----VMETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRAAKSLFPLEKQGAHDDDTDQEEDELTAANSAQLAEWEGMDFAASPVEDFSSFD--DGNESMEWGDGREDREGDGVPPVKASSSPGRRRRRGSLAPKSPLRRSIAAFSKDVRRGATSLDSDDSDLEDDAEYRAVDNLNASISVSGTTADRLGAVAAVADHGPDAHNLSFSITTTQMHGIADSDSSVELTGTF-------------ANPPEQAAASAA----------------PAPACASDEDRGFDDATPDDSGMDLNDSCDLASTLCSASIREATS-SPGMRRASTGSLLDLVSEVGEIEQEVLSQ 697
            +DSG TA +  V GLL+STPSPGG     DQS  +G   + +  L P+  +        D+       SA      RR TC P +F  +I  L     S P  P + R +                      PSS+ +  S P A       S   AG++   G P +S  +   +      DS   G +   K K ++ +RR+TASP++L  L+EDLG         G+D      T+ HG  +S+    +  P+         GA E   P +  TPSPP+ RRT+ KSP +  Q  +G+    SPR   +A  KR+S ++S A P++    P P PESARGRLKSCLSSRKR RG   G A+  +      ++G PD  +     G     GS P+  R      GG V +GA  G+              R P    V+ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSR AKSLFPLEK+    ++ + +EDE TAANSAQLAEWEG++   +   +F  FD  +G ESM +   +E           + +SP       SLA KSP+R+SI A+S+DVR           D + D   R V+NLNAS+     +A + GA AA  +   +  N SFSI  +Q+H + DSDSS+ELTGTF             A  P  AA + A                P    A D +R   DA  DDS M+LNDS +L STL  ASIR+A S +P  +R S+GSLL +V +V E E+EVLSQ
Sbjct:  681 KDSGGTAGNGSVCGLLDSTPSPGGG---FDQSFGEG---EGRGKLPPMTGRAGAIAAILDSGTRGGRSSAKAAKNGRRYTCEPEEFGDVIAGLD----SEPDTPASSRDDSRVGEDAASPQEKEGSVETLSTPSSSASHDSCPEASGPAAQQSGQDAGANXXXGGPEESMDVDTDEDSF---DSPGGGSEDENKPK-EREDRRSTASPTTLGALLEDLGAQ-------GEDE-----TDEHGTVNSTEVVKASPPQENESGPSDDGAAENTSPVIAHTPSPPVARRTRSKSPASMKQVNVGELGLVSPRPALSAKNKRSSMSIS-ASPASKASAPRPAPESARGRLKSCLSSRKRARGGPAGVASSSSGRSPSASLGTPDATNSAGTDGSLAMAGSSPSPSRGGGAAAGGGVAEGAPPGVKTPGSSWGVSCGGGRGPASDMVLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAKSLFPLEKK----EEAETDEDEDTAANSAQLAEWEGVEPMGTGDLEFDDFDGVNGGESM-FSLEQE---------AFSKASP-------SLAIKSPVRKSIMAYSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAAKRGASAASYE---EPQNRSFSINNSQLHRLNDSDSSLELTGTFTTGEDIRVTPVMAAAVPRDAAVAGADGGAAVGTGGTGDLSRPTAGGAGDAERSGGDADVDDS-MELNDSSELESTLHGASIRDAASPAPDPKRLSSGSLLSVVDDVEEFEEEVLSQ 1409          
BLAST of mRNA_A-nodosum_M_contig121.63.1 vs. uniprot
Match: D7FTI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI0_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.440e-45
Identity = 202/527 (38.33%), Postives = 258/527 (48.96%), Query Frame = 0
Query:   12 RDSGETARSECVLGLLESTPSPGGSGSVLDQSIADGSALKAQKTLAPVIHKVRET----DATELAKPVSAMPDPAARRRTCAPGDFESIIGDLSPSGSSAPSDPTAERLEEMY--PSSTPAPSSSPSARNFKISSSKSSAGSSSSL------------------GDPVQSTTLTGKQRQPRVNDSSLAGDDANKKNKLDKRNRRATASPSSLNNLMEDLGLDAVALGKSGQDVDLPSSTNSHGGSSSS-----NSSPSLAPKGALEVPPPEVK-TPSPPMVRRTQLKSPTRGQR----EIGDNTSSPRAAAQKRTSEAVSPAKPSNVDLRPTPQPESARGRLKSCLSSRKRTRGPQLGSAAFD----APAIGKPD------------------TPDHGPSCAVGSPP-AAMRDVVKTPGGPVQGALSGMSVQ--REPV----METPRRVMFGAPMAAEFNHLSPSNRLTPMPSRAAKSLFPLEKQGAHDDDTDQEEDELTAANSAQLAEWEGMDFAASPVEDFSSFD 475
            +DSG TA +  V GLL+STPSPGG    LDQS  +G   + +  L P+  +        D+    +  SA      RR TC P +F  +I DL     S P  P + R        +++P     P        SS SS  SS                     G P +S  +   +     +      +D NK  + D  +RR+TASP++L  L+EDLG    A G+   + D   + NS  G  +S      S PS    G  E   P +  TPSPP+ RRT+ KSP   +R    E+G  +  P A+A+ + S     A P++    P P PESARGRLKSCLSSRKR RG   G A+      + ++G PD                  +P  G   A GS   A     VKTP GP  G +SG      R P     +ETPRRVMFGAPMAAEFNHLSPSNRLTPMPSR AKSLFPLEKQ    ++ + +EDE TAANSAQLAEWEG++       +F  FD
Sbjct:  644 KDSGGTAGNGSVCGLLDSTPSPGGG---LDQSFGEG---EGRGKLPPMTGRAGAIAAILDSGTRGRRSSAKAGKNGRRNTCEPEEFGDVIADLD----SEPDTPASSRDHSRVGEDAASPQEKGEP-VETLSTPSSSSSLDSSPEXXXXXXXXXXXXXXXXXXXGGPEESMDVDTDEDS--FDSPGGGSEDENKPKERD--DRRSTASPTTLGALLEDLG----AQGE--DETDEHGTVNSTEGVKASPPQENESGPSD--DGVEENTSPIITHTPSPPVARRTRSKSPASMKRANVGEVGLASPRPAASARNKRSSMSISASPASKVSAPQPAPESARGRLKSCLSSRKRARGGPAGVASSSGRSPSASLGTPDLTNSAGTDGSLAMAGSSPSPSRGGGAAAGSGVIAGAPHGVKTP-GPSSG-VSGXXXXXXRGPASDMGLETPRRVMFGAPMAAEFNHLSPSNRLTPMPSRDAKSLFPLEKQ----EEAETDEDEDTAANSAQLAEWEGVEPMGEGDLEFDDFD 1141          
BLAST of mRNA_A-nodosum_M_contig121.63.1 vs. uniprot
Match: D7FTI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI1_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 3.790e-12
Identity = 81/205 (39.51%), Postives = 106/205 (51.71%), Query Frame = 0
Query:  525 AFSKDVRRGATSLDSDDSDLEDDAEYRAVDNLNASISVSGTTADRLGAVAAVADHGPDAHNLSFSITTTQMHGIADSDSSVELTGTFANP------PEQAAASAAP-------------------------APACASDEDRGFDDATPDDSGMDLNDSCDLASTLCSASIREATS-SPGMRRASTGSLLDLVSEVGEIEQEVLSQ 697
            A+S+DVR           D + D   R V+NLNAS+     +A + GA AA  +   +  N SFSI  +Q+H + DSDSS+ELTGTF         P  AAA +AP                         A   A + +    DA  DDS MDLN+S +L STL  ASIR+A S +P  +R S+GSLL +V +V E E+EVLSQ
Sbjct:    2 AYSEDVRAMGGGGPPSPYDSDFDPAARRVENLNASLLGPAASAVKRGASAASYE---EPQNRSFSINNSQLHRLNDSDSSLELTGTFTTSEEVRITPAMAAAVSAPRDXXXXXXXXXXXXXXXXXGDLSRPAAGGAGEAEPSVGDADVDDS-MDLNESSELESTLHGASIRDAASPAPDPKRLSSGSLLSVVDDVEEFEEEVLSQ 202          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig121.63.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KYX0_9PHAE9.010e-7138.03Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7FTI0_ECTSI2.440e-4538.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTI1_ECTSI3.790e-1239.51Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1444..1464
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 262..299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 219..242
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 723..748
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 175..191
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 74..354
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 916..933
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 691..799
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 939..954
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 853..869
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1248..1304
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1435..1456
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 822..899
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 27..48
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1006..1068
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1024..1043
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..495
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1250..1264
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 614..648
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..20
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 913..983
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..722
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 122..173
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1333..1353

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig121contigA-nodosum_M_contig121:761494..779132 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig121.63.1mRNA_A-nodosum_M_contig121.63.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig121 761060..779277 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig121.63.1 ID=prot_A-nodosum_M_contig121.63.1|Name=mRNA_A-nodosum_M_contig121.63.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1479bp
MTIAINHGQRGRDSGETARSECVLGLLESTPSPGGSGSVLDQSIADGSAL
KAQKTLAPVIHKVRETDATELAKPVSAMPDPAARRRTCAPGDFESIIGDL
SPSGSSAPSDPTAERLEEMYPSSTPAPSSSPSARNFKISSSKSSAGSSSS
LGDPVQSTTLTGKQRQPRVNDSSLAGDDANKKNKLDKRNRRATASPSSLN
NLMEDLGLDAVALGKSGQDVDLPSSTNSHGGSSSSNSSPSLAPKGALEVP
PPEVKTPSPPMVRRTQLKSPTRGQREIGDNTSSPRAAAQKRTSEAVSPAK
PSNVDLRPTPQPESARGRLKSCLSSRKRTRGPQLGSAAFDAPAIGKPDTP
DHGPSCAVGSPPAAMRDVVKTPGGPVQGALSGMSVQREPVMETPRRVMFG
APMAAEFNHLSPSNRLTPMPSRAAKSLFPLEKQGAHDDDTDQEEDELTAA
NSAQLAEWEGMDFAASPVEDFSSFDDGNESMEWGDGREDREGDGVPPVKA
SSSPGRRRRRGSLAPKSPLRRSIAAFSKDVRRGATSLDSDDSDLEDDAEY
RAVDNLNASISVSGTTADRLGAVAAVADHGPDAHNLSFSITTTQMHGIAD
SDSSVELTGTFANPPEQAAASAAPAPACASDEDRGFDDATPDDSGMDLND
SCDLASTLCSASIREATSSPGMRRASTGSLLDLVSEVGEIEQEVLSQTQD
NASDHHSAEDHGNQESDRSTDADTQEMLSPLTGANLSRPPSPISEAHPSS
MDASPPEDCSVGAPSTARWAPVFGQPSQTDRKRLATVREETSPGRTSNSC
PSPTMSIDASMAELHDDCLVDRKKNNNNNTTVKPALGVAEPARELSSDGV
HDGGSGAMSSSSLPSSSRLSAGAAGLAGGARGRAIKKAKGRSESVSSVGE
DVTVALPASVEFADVGGDEGEGRVAESARELSSDGVRDGGSGAMSSSSLP
LSSRLSAGAGGGGGRGRAIKKAKGRRRESVSSAGEDFTVALPASVEFADV
GGDKGEGRVAESARELSSDGVRDGGSGAMSSSSLLSSSRLSAGTAGGGGR
GRAIKKATGRRRESVSSAGEDVTVALPASVEFAYVGGDEGEGRVRAAVSS
SSARYLRRRSSSIADVEMEGNDHVVEISPGADAADVFAGNVLASVDPLPS
EREGYVDDASDGSEAGVDKVASELIKSRSSMTHGVTSEPAAVTAAAFRRP
LVRRASVSAAATVGAAPKHSTVLPTSQRRASTTLSLTKESGVRRRASIAE
APTTANSAVTTVGTAEGKQEGDAVDSTSTFPLVDAGDGRADSPPASSAFP
TGEVGSVESLAPSVDNAATHGVSIPLRRRASSPLVSVSKKGKRSRGSVGV
GGESRRASLQTVVGSFRRASVVPLQAAVGLAEGRGNTRRTSDAGGGGVGA
LRARLSSSDSVSSSVGLPRNSAVFARDELVLSDIAEERGRGEGEDDLEKE
HLEHLEEENELEESVIPLTMNIEVYRNY*
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