prot_A-nodosum_M_contig121.61.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig121.61.1
Unique Nameprot_A-nodosum_M_contig121.61.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length297
Homology
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BLAST of mRNA_A-nodosum_M_contig121.61.1 vs. uniprot
Match: A0A6H5KY64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY64_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 9.260e-21
Identity = 56/107 (52.34%), Postives = 75/107 (70.09%), Query Frame = 0 
Query:  187 EIGSLETELEALRKLKEEAARKKVVLKEGKSRRQERTNAADKRRGSVVELMDLETKSIQLEREALAWNEKLKMQMGLMLWSRPVKLLPHEVVLSYAAPHDSTLHHQV 293
            ++  LE EL AL   ++  A KK  L EGK+RR+ER  AA KR  SVV LM+LE KSI +E+EAL   EKL +Q+GL LW +P+ LLP +V++++AAPHD  L HQ+
Sbjct:  120 DVCGLEEELAALELRQQAVASKKAALLEGKARREERAKAAAKRSASVVRLMELEAKSIGIEKEALEMKEKLDVQLGLRLWCQPITLLPDKVMVAFAAPHDWGLKHQL 226
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig121.61.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KY64_9PHAE9.260e-2152.34Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 236..256
NoneNo IPR availableCOILSCoilCoilcoord: 167..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig121contigA-nodosum_M_contig121:754221..760866 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig121.61.1mRNA_A-nodosum_M_contig121.61.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig121 753835..760895 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig121.61.1 ID=prot_A-nodosum_M_contig121.61.1|Name=mRNA_A-nodosum_M_contig121.61.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=297bp
MANMDEFPIQSVVVSPGSGSRDMEIPDGLLHALASTLNAASDEMEDKVAV
VHEHAEAVVETAWRLHTDAPILAEIDHAIATRAVGDGKAMGMVRRVRDMA
KQIKSNLVTEWKAWEVEVMTRLNIEAEKALAQVSKTGSASTARGNQIEEM
ISQTDWARRSIKREESRASIRSRIEKTEAALAQTRSEIGSLETELEALRK
LKEEAARKKVVLKEGKSRRQERTNAADKRRGSVVELMDLETKSIQLEREA
LAWNEKLKMQMGLMLWSRPVKLLPHEVVLSYAAPHDSTLHHQVPQQ*
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