prot_A-nodosum_M_contig121.50.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig121.50.1
Unique Nameprot_A-nodosum_M_contig121.50.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length140
Homology
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BLAST of mRNA_A-nodosum_M_contig121.50.1 vs. uniprot
Match: D7FTG0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTG0_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 4.880e-5
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = 0 
Query:   93 TRPADEVSGGTEQPEAKKPKADVDPETAEPSKTLETPAETPVAEPAA 139
            TR  DEVSGGTE+P+AKK KAD     AEP+K +ET  E P +EPAA
Sbjct:  123 TRTVDEVSGGTEEPDAKKAKADAPEAAAEPTKVVETATEAPASEPAA 169
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig121.50.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FTG0_ECTSI4.880e-561.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 36..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig121contigA-nodosum_M_contig121:674550..675605 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig121.50.1mRNA_A-nodosum_M_contig121.50.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig121 674538..675605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig121.50.1 ID=prot_A-nodosum_M_contig121.50.1|Name=mRNA_A-nodosum_M_contig121.50.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=140bp
MLETLLKHLEAAASTNGDSTKEVAEPNGSSKDDAAPENGESIKGEVSKDD
AVPDAATLEAEVILEAEPASAEEPADKPAEDIVAPAAEGAAPTRPADEVS
GGTEQPEAKKPKADVDPETAEPSKTLETPAETPVAEPAA*
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