prot_A-nodosum_M_contig12083.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12083.2.1
Unique Nameprot_A-nodosum_M_contig12083.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length70
Homology
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 9.610e-17
Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   13 GGFRKMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAE 70
            G F+ +IDW+AA GC Y  L+RRKFL+LLP + RN +PDKG+ V+Y+GDGH LS+EAE
Sbjct:  104 GAFKDVIDWQAAQGC-YSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAE 160          
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 9.760e-17
Identity = 36/58 (62.07%), Postives = 47/58 (81.03%), Query Frame = 0
Query:   13 GGFRKMIDWEAASGCFYWTLNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAE 70
            G F+ +IDW+AA GC Y  L+RRKFL+LLP + RN +PDKG+ V+Y+GDGH LS+EAE
Sbjct: 1575 GAFKDVIDWQAAQGC-YSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAE 1631          
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 5.100e-6
Identity = 23/58 (39.66%), Postives = 31/58 (53.45%), Query Frame = 0
Query:   18 MIDWEAASGCFYWT--------LNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSV 67
            +I W A   C  W         L+RR FL  +P   RN +PD G+ V+YFGDGH  ++
Sbjct: 1734 VIAWSALEACLDWATAAAVWAALSRRAFLQNIPSQGRNTMPDIGDVVVYFGDGHTAAL 1791          
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Match: A0A6G0RU20_9STRA (Uncharacterized protein n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6G0RU20_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 6.240e-5
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   32 LNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAE 70
            L+RR++L L P+  RN IP+ G  V+YFGDGHAL+++ +
Sbjct: 1566 LDRREWLKLRPKETRNFIPEVGQVVVYFGDGHALALKED 1604          
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Match: A0A0P1AKP8_PLAHL (CREB binding protein/P300 and related TAZ Zn-finger proteins n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP8_PLAHL)

HSP 1 Score: 48.5 bits (114), Expect = 8.540e-5
Identity = 20/39 (51.28%), Postives = 30/39 (76.92%), Query Frame = 0
Query:   32 LNRRKFLALLPENARNEIPDKGNSVIYFGDGHALSVEAE 70
            L+RR++L L P+   N IP+ G +VIYFGDGHAL+++ +
Sbjct: 1556 LDRREWLKLRPKETHNFIPEVGQTVIYFGDGHALALKED 1594          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12083.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L3E5_9PHAE9.610e-1762.07Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
D7G6R7_ECTSI9.760e-1762.07Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZDW7_9STRA5.100e-639.66Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6G0RU20_9STRA6.240e-551.28Uncharacterized protein n=11 Tax=Phytophthora TaxI... [more]
A0A0P1AKP8_PLAHL8.540e-551.28CREB binding protein/P300 and related TAZ Zn-finge... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12083contigA-nodosum_M_contig12083:4863..5292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12083.2.1mRNA_A-nodosum_M_contig12083.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12083 4862..5292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12083.2.1 ID=prot_A-nodosum_M_contig12083.2.1|Name=mRNA_A-nodosum_M_contig12083.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=70bp
QRADGCSTSGSMGGFRKMIDWEAASGCFYWTLNRRKFLALLPENARNEIP
DKGNSVIYFGDGHALSVEAE
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