prot_A-nodosum_M_contig1208.11.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1208.11.1
Unique Nameprot_A-nodosum_M_contig1208.11.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length572
Homology
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: F0Y1I9_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y1I9_AURAN)

HSP 1 Score: 62.0 bits (149), Expect = 8.690e-9
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  508 ACAPGGGNTGHWTQDEHTRFLKGMKKYQNRWQLIADMVGTRTPTQCRTHAQKY 560
            A  P     GHW +DEH +FL G++ +  RW  +A +VGTRT +Q R+HAQKY
Sbjct:    3 APTPAEARAGHWAEDEHAKFLAGLETFGRRWDRVARIVGTRTMSQVRSHAQKY 55          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: K3WND0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WND0_GLOUD)

HSP 1 Score: 65.5 bits (158), Expect = 1.520e-8
Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query:  519 WTQDEHTRFLKGMKKY-QNRWQLIADMVGTRTPTQCRTHAQKYNIKLNRR 567
            W++DEH RFL G+KK+ +  W++IA  VGTRTP Q +THAQKY  K+NRR
Sbjct:   20 WSEDEHDRFLVGLKKFPRGPWRMIAAQVGTRTPRQVQTHAQKYYEKINRR 69          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: A0A1R2C6A6_9CILI (Uncharacterized protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2C6A6_9CILI)

HSP 1 Score: 62.8 bits (151), Expect = 3.460e-8
Identity = 24/51 (47.06%), Postives = 39/51 (76.47%), Query Frame = 0
Query:  517 GHWTQDEHTRFLKGMKKYQNRWQLIADMVGTRTPTQCRTHAQKYNIKLNRR 567
            GHW+++EHTRF++G++ Y   W+ + + VGTR+  Q R+HAQKY +KL ++
Sbjct:   15 GHWSKEEHTRFVQGIQMYGKDWKKVVECVGTRSSNQIRSHAQKYFLKLEKK 65          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: L1IG99_GUITC (Uncharacterized protein (Fragment) n=2 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1IG99_GUITC)

HSP 1 Score: 59.3 bits (142), Expect = 7.760e-8
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  515 NTGHWTQDEHTRFLKGMKKYQNRWQL---IADMVGTRTPTQCRTHAQKYNIKLNRRR 568
            N   WT++EH RFL+ +KKY     L   +++ VGTRTP Q R+HAQKY ++LN+ R
Sbjct:    2 NQSQWTKEEHDRFLQALKKYLPSGALAKKVSEFVGTRTPLQVRSHAQKYFLRLNKNR 58          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: A0A418AIQ7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AIQ7_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 9.410e-8
Identity = 38/83 (45.78%), Postives = 47/83 (56.63%), Query Frame = 0
Query:  485 RFSSPPPSRGVTPARHTDLAATSACAPGGGNTGHWTQDEHTRFLKGMKKY-QNRWQLIADMVGTRTPTQCRTHAQKYNIKLNR 566
            ++ SP P     PA     A+++A A     TG WT  EH RFL  ++ Y Q  W+ IA  VGTRTP Q +THAQKY  KL R
Sbjct:    2 KYFSPQPMHSSAPAVDRKRASSTAMA-----TGTWTSCEHKRFLAAIELYPQGPWKAIAKYVGTRTPRQAQTHAQKYREKLLR 79          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: A0A7S4E2L3_9STRA (Hypothetical protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=A0A7S4E2L3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 9.590e-8
Identity = 29/56 (51.79%), Postives = 39/56 (69.64%), Query Frame = 0
Query:  513 GGNTGHWTQDEHTRFLKGMKKYQNRWQLIADMVGTRTPTQCRTHAQKYNIKLNRRR 568
            G  TG WT +EHTRFL G++ +  +W  +AD+VG+RT  Q R+HAQKY  KL + R
Sbjct:   20 GEKTGRWTDEEHTRFLHGLELFGKKWTKVADVVGSRTTVQVRSHAQKYFQKLEKDR 75          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: W2K383_PHYPR (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2K383_PHYPR)

HSP 1 Score: 63.5 bits (153), Expect = 1.260e-7
Identity = 34/64 (53.12%), Postives = 40/64 (62.50%), Query Frame = 0
Query:  511 PGGGNTGH-----WTQDEHTRFLKGMKKYQ-NRWQLIADMVGTRTPTQCRTHAQKYNIKLNRRR 568
            PG   T H     WT DEH RFL+G+++Y    W+ IA  VGTRTP Q  THAQKY  K+ RRR
Sbjct:   62 PGDRQTPHRHGLPWTTDEHDRFLQGLERYPCGPWKAIAAFVGTRTPRQTMTHAQKYRQKIQRRR 125          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: A0A833THA5_PHYIN (Myb-like DNA-binding domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833THA5_PHYIN)

HSP 1 Score: 63.5 bits (153), Expect = 1.330e-7
Identity = 30/51 (58.82%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  519 WTQDEHTRFLKGMKKYQNR-WQLIADMVGTRTPTQCRTHAQKYNIKLNRRR 568
            WT DEH RFL+G+++Y +  W+ IA  VGTRTP Q  THAQKY  K+ RRR
Sbjct:   78 WTTDEHDRFLQGLERYPSGPWKAIAAFVGTRTPRQTMTHAQKYRQKIQRRR 128          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: H3GUL3_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GUL3_PHYRM)

HSP 1 Score: 63.2 bits (152), Expect = 1.490e-7
Identity = 29/51 (56.86%), Postives = 37/51 (72.55%), Query Frame = 0
Query:  519 WTQDEHTRFLKGMKKYQNR-WQLIADMVGTRTPTQCRTHAQKYNIKLNRRR 568
            WT DEH RFL+G+++Y +  W+ +A  VGTRTP Q  THAQKY  K+ RRR
Sbjct:   73 WTTDEHDRFLQGLERYPSGPWKTVAAFVGTRTPRQTMTHAQKYRQKIQRRR 123          
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Match: A0A1R2BI40_9CILI (Uncharacterized protein n=2 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2BI40_9CILI)

HSP 1 Score: 60.5 bits (145), Expect = 2.210e-7
Identity = 23/51 (45.10%), Postives = 38/51 (74.51%), Query Frame = 0
Query:  517 GHWTQDEHTRFLKGMKKYQNRWQLIADMVGTRTPTQCRTHAQKYNIKLNRR 567
            GHW+++EHTRF++G++ +   W+ + + VGTR+  Q R+HAQKY  KL ++
Sbjct:   15 GHWSKEEHTRFVQGIQMHGKNWKKVVECVGTRSSNQIRSHAQKYFAKLEKK 65          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1208.11.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0Y1I9_AURAN8.690e-949.06Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
K3WND0_GLOUD1.520e-860.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1R2C6A6_9CILI3.460e-847.06Uncharacterized protein n=1 Tax=Stentor coeruleus ... [more]
L1IG99_GUITC7.760e-849.12Uncharacterized protein (Fragment) n=2 Tax=Guillar... [more]
A0A418AIQ7_9STRA9.410e-845.78Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A7S4E2L3_9STRA9.590e-851.79Hypothetical protein n=2 Tax=Pelagomonadales TaxID... [more]
W2K383_PHYPR1.260e-753.13Uncharacterized protein n=7 Tax=Phytophthora TaxID... [more]
A0A833THA5_PHYIN1.330e-758.82Myb-like DNA-binding domain n=1 Tax=Phytophthora i... [more]
H3GUL3_PHYRM1.490e-756.86Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A1R2BI40_9CILI2.210e-745.10Uncharacterized protein n=2 Tax=Stentor coeruleus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 515..563
e-value: 2.8E-13
score: 60.1
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 517..561
score: 7.921064
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 519..560
e-value: 4.6459E-11
score: 56.0446
IPR001965Zinc finger, PHD-typeSMARTSM00249PHD_3coord: 257..305
e-value: 0.0021
score: 27.3
coord: 307..356
e-value: 0.023
score: 23.8
coord: 421..466
e-value: 5.2E-7
score: 39.3
coord: 61..105
e-value: 6.7E-5
score: 32.3
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 49..114
e-value: 9.1E-9
score: 36.9
coord: 401..476
e-value: 5.4E-9
score: 37.6
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 307..368
e-value: 1.4E-6
score: 29.8
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 257..306
e-value: 2.9E-6
score: 29.1
IPR006447Myb domain, plantsTIGRFAMTIGR01557TIGR01557coord: 518..563
e-value: 2.6E-8
score: 32.0
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 516..560
e-value: 7.8E-15
score: 54.8
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 515..565
score: 16.696178
NoneNo IPR availableGENE3D1.10.10.60coord: 518..564
e-value: 5.3E-16
score: 60.5
NoneNo IPR availablePANTHERPTHR12802SWI/SNF COMPLEX-RELATEDcoord: 513..569
NoneNo IPR availablePANTHERPTHR12802:SF125SUBFAMILY NOT NAMEDcoord: 513..569
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 59..107
score: 8.867
IPR019787Zinc finger, PHD-fingerPROSITEPS50016ZF_PHD_2coord: 419..468
score: 8.7246
IPR017884SANT domainPROSITEPS51293SANTcoord: 519..565
score: 11.688624
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 248..308
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 56..107
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 412..469
IPR011011Zinc finger, FYVE/PHD-typeSUPERFAMILY57903FYVE/PHD zinc fingercoord: 307..357
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 516..566

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1208contigA-nodosum_M_contig1208:82534..84959 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1208.11.1mRNA_A-nodosum_M_contig1208.11.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1208 81598..85812 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1208.11.1 ID=prot_A-nodosum_M_contig1208.11.1|Name=mRNA_A-nodosum_M_contig1208.11.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=572bp
MKRAAVPRARTSTHLSSRRITRSKKTLTHKISKISDGKPGTKRPWISNAA
ISNGAAFERPCCIACGNSESELAKCAICGGHYHVRCVDPSGKEMPGSGWV
CGICRRPEELTRAFTIPPSPRAPASQSTLKAKAHSAELVQSMLARLSGES
TSDRRLYPCETKSIDERPTAQRFDYEEQGVHSSSVTDAVLVWALKRAGGG
GGSENAAATKLSAQPPAMESVEESVEDAHRRRSGGMRRAISGVGDGKHAL
CGYVGPRCYCGNTDGTKAIARCVSCAAVFHPSCMDPPYPSLKSLPIAGYT
CLACRPACGVCGVGMLPESPTSLKINCAACKLVFHRACLTPPAVGPCDEW
ECLKCSLASEESNDQDEALPVERREPAAPRAESKILEDLTRLKTDRQQGW
NTIRTSATSHVFGKFDIKQRACVVCGVAEGRRMNVCGSCGDAYHSLCLDR
PRTRRAGDIWRCDSCRSSAPTDARTPSVVPPSLPRFSSPPPSRGVTPARH
TDLAATSACAPGGGNTGHWTQDEHTRFLKGMKKYQNRWQLIADMVGTRTP
TQCRTHAQKYNIKLNRRRQSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001005SANT/Myb
IPR001965Znf_PHD
IPR013083Znf_RING/FYVE/PHD
IPR006447Myb_dom_plants
IPR017930Myb_dom
IPR019787Znf_PHD-finger
IPR017884SANT_dom
IPR011011Znf_FYVE_PHD
IPR009057Homeobox-like_sf