prot_A-nodosum_M_contig1207.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1207.10.1
Unique Nameprot_A-nodosum_M_contig1207.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length576
Homology
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438K5H3_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438K5H3_VITVI)

HSP 1 Score: 234 bits (596), Expect = 7.820e-64
Identity = 178/582 (30.58%), Postives = 276/582 (47.42%), Query Frame = 0
Query:   10 SPYELWFGKSPTAYHLRPFGTVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGRDGTGSTPQLNVQELGQEQHEHEWQEAISELEGETQGALSDHGEDTQEVLSEDEREQQHEEEGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKTPHRCGG-----GALHCFLPAIEAEEENGVEDVLACDDGGQMAMQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQADPRRVPEVV---DGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVK--KEAKIPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            +PYE+W G+ P   H++ +G   Y ++ ++  K+  + +KC F+G P+       +      V + R    +ER+ +      K+   D T    + N     QE HE E+++   ++   TQ                                  L+ PT+ A     +   V                          +H   P   +   +   D L       ++ +   +  +P+N  +AM+S + ++W++A E+E+  M  N V+  V   KD   IG K +YK+KIG DGKVE YK RLVA+G+ Q EG+ Y E +SP     SIR+LLA AA  D E+   D + A     P V     G   + +V++VDDIL    D   M      L  +F +KD+G+A Y +G  I R+R  R L   Q +Y+++++KR+N++  K   +P  +G  TLS+ D P+ PEE+E M   PY  AVGA+M+  T TRPD+A A+   +R+  NPG  H K V  I +YL  TK+  + YG     L ++ YTD+   +  D  +S+SG V  L  GA+SW S
Sbjct:  168 TPYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLAEGSHGKEIELDETQE--ETNETTAAQE-HEMEFEQPFFDVLKSTQ---------------------------------RLQSPTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIH--EPLRRSSRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQSLDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNEEPCVYKRFSGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGESE--LKLKGYTDASFASDKDDSKSISGYVFTLNGGAVSWKS 707          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A2K3MAN7_TRIPR (Retrotransposon protein putative Ty1-copia subclass (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MAN7_TRIPR)

HSP 1 Score: 201 bits (510), Expect = 5.400e-54
Identity = 137/402 (34.08%), Postives = 203/402 (50.50%), Query Frame = 0
Query:  237 EPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA----------------------DPRRVPEV---------------------------------------VDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAK--IPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            +P++  +AM+S + D+W +A E+EM  M  N V+  V   K    IG K +YK+KIG DGKVE YK RLVA+G+ Q EG+ Y E +SP     SIR+LLA AA  D E+   D + A                      D  +V ++                                       + G + + +V++VDDIL    D  +M      L  +F +KD+G+A Y +G  I R+R  R L   Q +Y+++++KR+N++K  +  +P   G  +LS+ + P+  EE+E M   PY  AVGA+M+  T TRPD+A A+   +R+  NPG  H K V  I +YL  TK+  + YG     L ++ YTD+   +  D  +S+SG V  L  GAISW S
Sbjct:   92 DPKSYEEAMQSLDHDKWIRAMESEMESMKINKVWTLVEASKGIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMIKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEEVYMTQPEGFTSLSDHNKVCKLQRSIYGLKQASRSWNIRFNNTIEKFNFVKCEEEPCVYKKISGSSIIFLVLYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMEKSKRGYLPVGMGV-SLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTRPDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGNSE--LSLKGYTDASFASDKDDSKSISGYVFTLNGGAISWKS 490          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438JH99_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JH99_VITVI)

HSP 1 Score: 207 bits (527), Expect = 1.430e-53
Identity = 176/640 (27.50%), Postives = 275/640 (42.97%), Query Frame = 0
Query:   10 SPYELWFGKSPTAYHLRPFGTVGYARQSVREHKMAPKGEKCVFMGIPRN------FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGRDGTGSTPQLNVQELGQEQHEHEWQEAISELEGETQGALSDHGEDTQEVLSEDEREQQHEEEGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKTPHRCGG-----GALHCFLPAIEAEEENGVEDVLACDDGGQMAMQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA-------------DPRRVPEVVD------------------------------------------------GEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVK--KEAKIPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            +PYE+W G+ P   H++ +G   Y ++ ++  K+  + +KC F+G P+       +      V + R    +ER+ +      K+   D T    + N     QE HE E+++   ++   TQ                                  L+ PT+ A     +   V                          +H   P   +   +   D L       ++ +   +  +P+N  +AM+  + ++W++A E+E+  M  N V+  V   KD   IG K +YK+KIG DGKVE YK RLVA+G+ Q EG+ Y E +SP     SIR+LLA AA  D E+   D + A              P     + D                                                G   + +V++VDDIL    D   M      L  +F +KD+G+A Y +G  I R+R  R L   Q +Y+++++KR+N++  K   +P  +G  TLS+ D P+ PEE+E M   PY  AVGA+M+  T TRPD+A A+   +R+  NPG  H K V  I +YL  TK+  + YG     L ++ YTD+   +  D  +S+SG V  L  G +SW S
Sbjct:  504 TPYEIWKGRKPNLKHIKVWGCPAYVKK-LQTDKLEARSDKCRFIGYPKETMGYYFYHPLDHKVFVARGGTFLEREFLAEGSHGKEIELDETQE--ETNETTAAQE-HEMEFEQPFFDVLKSTQ---------------------------------RLQSPTIVAPEPAIVQEQVNEXXXXXXXXXXXXXXLEQIQQPLNPIH--EPLRRSNRAHRAPDRLNLMVQDDLSNEVHHNDDDPKNYEEAMQILDRNKWQEAMESEIESMKINKVWTLVEASKDIKPIGCKWVYKKKIGADGKVETYKARLVAKGYRQKEGIDYDETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTAFLNGELKEDVYMTQPEGYTSMSDHNKVCKLRRSIYGLKQASRSWNIHFNKTIEKFDFVKCEEEPCVYKRFSGSTIIFLVLYVDDILLIGNDIPAMQGTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYIDTILKRYNMENSKRGYLPIGTGV-TLSREDCPKTPEERERMNRVPYASAVGAIMYTMTCTRPDVAYALSVASRYQANPGEEHWKVVKTILKYLRRTKDQFLIYGESE--LKLKGYTDASFASDKDDSKSISGYVFTLNGGTVSWKS 1101          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438GKY6_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438GKY6_VITVI)

HSP 1 Score: 207 bits (526), Expect = 2.090e-53
Identity = 130/347 (37.46%), Postives = 189/347 (54.47%), Query Frame = 0
Query:  236 SEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQADPR-RVPEVVDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAKIPAASGAQTLSKADE------PQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            ++P +  QAM   E + W  A + EM  M  N V+D V  P     IG K ++K K    G +E+YK +LVA+GF Q EG+ YTE +SP     S+R++LA  A  D EL+  D + A     + E V G      V++VDDIL    D+  ++     L + F +KDMG+A Y +G  I R+R    L   Q  ++  +++RF +K       +     + K D       P+N  E+E+MK  PY  AVG+LM+A   TRPDIA AV  + R+  NPG+ H KA  K+ +YL  TK++ + Y  +   L +  Y+DSD   C+D+R+S SG + +LA GAISW S
Sbjct:  883 NDPESFSQAMNCKESELWYNAMKDEMSSMKCNDVWDLVELPNGAKTIGCKWVFKTKKDSLGNIERYKAKLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVSGSKVCFFVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETHINKVLERFRMKN-----CSPSVSPIVKGDSFNLNQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRS 1223          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY)

HSP 1 Score: 203 bits (517), Expect = 6.720e-53
Identity = 184/629 (29.25%), Postives = 270/629 (42.93%), Query Frame = 0
Query:   10 SPYELWFGKSPTAYHLRPFGTVGYARQSVREHKMAPKGEKCVFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGRDGTGSTPQLNVQELGQEQHEHEWQEAISELEGETQGALSDHGEDTQEVLSEDEREQQHEEEGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKTPHRCGGGALHCFLPAIEAEEENGVEDVLACDDGGQMAMQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA-------------------------------------------------------------DPRRVPEVVDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAK--IPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            +PYELW GK P+  H++ +G   + R+S    K+ P+ ++C+F+G P+   TG         +  V R A+                                  +E  S  E  T+  L +  +    V SE+  EQ             +  PT P+        N+     S TR  + P R         L  I   E +G ++                   +P   ++AM   + + W+KA E+EM  M  N V+  V +P+    IG K +YKRK+G  GKVE YK RLVA+G+ Q  G+ Y E +SP     SIR+LL+ AA  D E+   D + A                                                             D   V + V G     ++++VDDIL    D   M+     L   F +KD+G+A Y +G  + R+RK R L   Q  Y++ ++ RF+++   K   P   G   LSK   P+  EE+E+M+  PY  AVG+LM+A   TRPDI  AV  V+R+  NPG  H  AV  I +YL  TK + + +G +   L ++ YTDSD  + +D R+S+SG V  L KGAISW S
Sbjct:  168 TPYELWTGKKPSLNHIKIWGCPSHVRKS-NVDKLGPRSDRCLFVGYPK-MSTGFYFYNPSEQKVFVSRNAIFL--------------------------------EEDYSLNESRTKVTLEEQNDRPMTVPSENNEEQ-------------VIVPTEPS--------NMQEPRRS-TRIIRPPVRL------TLLNEIYQMESDGFDN-------------------DPVTYQEAMNDKDVEHWKKAMESEMDSMYTNQVWTLVDKPEGIKPIGCKWIYKRKLGPTGKVETYKVRLVAKGYTQKAGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFISHGQESKVCKLMKSIYGLKQASRSWNIRFDEAIKSFGFSQNIDEPCVYKKVSGRIITFLILYVDDILLIGNDVGAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVH-LSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRS 712          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: UPI001131160E (DDE-type integrase/transposase/recombinase n=2 Tax=Escherichia coli TaxID=562 RepID=UPI001131160E)

HSP 1 Score: 201 bits (512), Expect = 3.870e-52
Identity = 179/641 (27.93%), Postives = 270/641 (42.12%), Query Frame = 0
Query:    4 STNEGKSPYELWFGKSPTAYHLRPFGTVGYARQSVREHKMAPKGEKCVFMGIPRN-------FPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGRDGTGSTPQLNVQELGQEQHEHEWQEAISELEGETQGALSDHGEDTQEVLSEDEREQQHEEEGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKTPHRCGGGALHCFLPAIEAEEENGVEDVLACDDGGQMAMQATLDVSEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDA---------------------EQADPRRVPEV---------------------------------------VDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNV--KKEAKIPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            S +   +PYE+W G+ P+  H++ +G   Y ++ +   K+  + E+  F+G P++        PT    V++ R    +E+Q VQ           G G   +L ++                          SD   D  ++                           P+ + + +D     +    TR    P R G   LH      E E+E    + +   D      +A  DV   +             W  A ++E+  M +N V+D V  P+  + IG K ++K+KIG DGKVE YK RLVA+GF Q +G+ Y E +SP     SIR+LLA AA  D E+   D                      E  D  +V ++                                       V   A   +V++VDDIL    D   +      L   F +KD+G+A Y +G  I R+R  R +   Q LY+E ++KRFN+   K   +P   G   LSK   P+ PEE+++M   PY  A+G+LM+A   TRP+IA AV   +R+  NPGL H  A+  I +YL  TK+  + YGG    L ++ YTDSD  + +D R+S S  V +   GA+SW S
Sbjct:  241 SKSVSSTPYEIWHGRKPSLKHVKIWGCPAYIKK-LNTDKLETRSERGRFVGYPKDSFGYYFYLPTSQ-KVVISRDATFLEQQFVQ---------EGGKGRQIELELEN-------------------------SDQPTDQMDID--------------------------PSSQPIPVDETSTAVPRRTTRVSHPPVRYG--FLH------EEEQELSTHEEVDHGDDPLTYEEAISDVYSSK-------------WIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYEIWQMDVKTTFLNGYIEENIFMEQPKGFESQDGSKVCKLKRSIYGLKQASRSWNIRFDEAIKSFGFIKNEDEPCVYKKVSDSAITFLVLYVDDILLMGNDTGMLTTIKVWLSNTFSMKDLGEATYILGIRIYRDRAKRIIGLSQSLYLEKVLKRFNMLDSKRGLLPVRHGIH-LSKEMSPKTPEERDKMARIPYASAIGSLMYAMLCTRPNIAYAVSLTSRYQSNPGLEHWIAIKNILKYLRRTKDLFLIYGGGD--LQLDGYTDSDFQSDIDDRKSTSRYVFICNGGAVSWKS 795          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438E557_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438E557_VITVI)

HSP 1 Score: 196 bits (498), Expect = 1.540e-51
Identity = 124/360 (34.44%), Postives = 191/360 (53.06%), Query Frame = 0
Query:  243 QAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA---------------------DPRRVPEVVDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAKIPAASGAQTLSKADE------PQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            Q  +S + ++W +A + EM  M +N V+D V  P+    IG K ++K K    G + +YK RLVA+GF Q EG+ Y E +SP  S  S R+++A  A  D EL   D + A                     D +++ E +     +++V++VDDIL  + D   ++     L  KF +KD+G+A + +G  I R+R    L   Q  Y++ ++ RF +        A G   ++K D+      P+N  EK++M+ FPY   VG+LM+A   TRPDIA  V  + R+  N G+ H K   ++ +YL  TK++ +TY  +   L +  Y+DSD   CLD+RRS SG + MLA GA+SW S
Sbjct:  220 QVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPEGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLWEQI-----IILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSN-----CAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASVVGSLMYAQVCTRPDIAYIVGMLGRYLSNLGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKS 568          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438EN28_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438EN28_VITVI)

HSP 1 Score: 196 bits (498), Expect = 3.210e-51
Identity = 134/381 (35.17%), Postives = 192/381 (50.39%), Query Frame = 0
Query:  236 SEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA-------------DPRRVPEVVDGEAEMV----------------------VVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAKIPAASGAQTLSKADE------PQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            ++P +  QAM   E + W  A + EM  M  N V+D V  P     IG K ++K K    G +E+YK RLVA+GF Q EG+ YTE +SP     S+R++LA  A  D EL+  D + A              P   P   DGE  +                       +V++VDDIL    D+  ++     L + F +KDMG+A Y +G  I R+R    L   Q  Y+  +++RF +K       +     + K D       P+N  E+E+MK  PY  AVG+LM+A   TRPDIA AV  + R+  NPG+ H KA  K+ +YL  TK++ + Y  +   L +  Y+DSD   C+D+R+S SG + +LA GAISW S
Sbjct:  236 NDPESFSQAMSCKESELWYNAMKDEMSSMKCNDVWDLVELPNGVKTIGCKWVFKTKKDSLGNIERYKARLVAKGFTQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTAFLNGELEEEVYMKQPEGFPSS-DGEQLVCKLKKSIYGLKQASRQCGSKVCFLVLYVDDILLATNDKGLLHEVKQFLSKNFDMKDMGEASYVIGIKIHRDRFKGILGLSQETYINKVLERFRMKN-----CSPSVSPIVKGDRFNLDQCPKNDLEREQMKNIPYASAVGSLMYAQVCTRPDIAFAVGMLGRYQSNPGIDHWKAAKKVMRYLQGTKDYKLMYR-RTSNLEVVGYSDSDFAGCVDSRKSTSGYIFILAGGAISWRS 609          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A438FC14_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438FC14_VITVI)

HSP 1 Score: 198 bits (504), Expect = 3.490e-51
Identity = 130/373 (34.85%), Postives = 195/373 (52.28%), Query Frame = 0
Query:  243 QAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQA---------------------DPRRVP-----EVVD--------GEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAKIPAASGAQTLSKADE------PQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            Q  +S + ++W +A + EM  M +N V+D V  PK    IG K ++K K    G + +YK RLVA+GF Q EG+ Y E +SP  S  S R+++A  A  D EL   D + A                     D +++      E VD        G   +++V++VDDIL  + D   ++     L  KF +KD+G+A + +G  I R+R    L   Q  Y++ ++ RF +        A G   ++K D+      P+N  EK++M+ FPY  AVG+LM+A   TRPDIA  V  + R+  NPG+ H K   ++ +YL  TK++ +TY  +   L +  Y+DSD   CLD+RRS SG + MLA GA+SW S
Sbjct:  421 QVKQSSDSEKWIEAMKDEMKSMKDNGVWDLVELPKGVKPIGCKWIFKTKRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKREHVDQCIYLKFSGSKFIILVLYVDDILLASSDVGLLHETKRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSN-----CAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVGYSDSDFAGCLDSRRSTSGYIFMLAGGAVSWKS 787          
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Match: A0A2N9IFW4_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IFW4_FAGSY)

HSP 1 Score: 198 bits (503), Expect = 1.330e-50
Identity = 131/344 (38.08%), Postives = 194/344 (56.40%), Query Frame = 0
Query:  236 SEPRNRRQAMESHEWDEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDAEQADPRRVPEVVDGEA--EMVVVVHVDDILAHAKDQATMNRFAAELGRKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAK--IPAASGAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAVARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVGACLDTRRSVSGAVLMLAKGAISWHS 575
            ++P   ++AM   + + W+KA E+EM  M  N V+  V +P+    IG K +YKRK+G  GKVE YK RLVA+G+ Q  G+ Y E +SP     SIR+LL+ AA  D E+   D + A        ++G    E+ +   V   ++ A+ +  M+     L   F +KD+G+A Y +G  + R+RK R L   Q  Y++ ++ RF+++   K   P   G   LSK   P+  EE+E+M+  PY  AVG+LM+A   TRPDI  AV  V+R+  NPG  H  AV  I +YL  TK + + +G +   L ++ YTDS+  + +D R+S+SG V  L KGAISW S
Sbjct:  546 NDPVTYQEAMNDKDVEHWKKAMESEMDSMYTNQVWTLVDKPEGIKPIGCKWIYKRKLGPTGKVETYKARLVAKGYTQKVGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTA-------FLNGNIREEIYMDQPVGFHISWARIKRAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVH-LSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSNFQSDIDDRKSISGFVFTLGKGAISWRS 879          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1207.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438K5H3_VITVI7.820e-6430.58Retrovirus-related Pol polyprotein from transposon... [more]
A0A2K3MAN7_TRIPR5.400e-5434.08Retrotransposon protein putative Ty1-copia subclas... [more]
A0A438JH99_VITVI1.430e-5327.50Retrovirus-related Pol polyprotein from transposon... [more]
A0A438GKY6_VITVI2.090e-5337.46Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IUC8_FAGSY6.720e-5329.25Integrase catalytic domain-containing protein n=2 ... [more]
UPI001131160E3.870e-5227.93DDE-type integrase/transposase/recombinase n=2 Tax... [more]
A0A438E557_VITVI1.540e-5134.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A438EN28_VITVI3.210e-5135.17Retrovirus-related Pol polyprotein from transposon... [more]
A0A438FC14_VITVI3.490e-5134.85Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IFW4_FAGSY1.330e-5038.08CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 267..353
e-value: 3.0E-16
score: 59.7
coord: 363..442
e-value: 1.4E-11
score: 44.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..163
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 127..157
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 369..531
coord: 227..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1207contigA-nodosum_M_contig1207:178959..180917 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1207.10.1mRNA_A-nodosum_M_contig1207.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1207 178959..180917 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1207.10.1 ID=prot_A-nodosum_M_contig1207.10.1|Name=mRNA_A-nodosum_M_contig1207.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=576bp
VTTSTNEGKSPYELWFGKSPTAYHLRPFGTVGYARQSVREHKMAPKGEKC
VFMGIPRNFPTGTVSVLLVRSRNIVERQAVQWIDGPKKTGRDGTGSTPQL
NVQELGQEQHEHEWQEAISELEGETQGALSDHGEDTQEVLSEDEREQQHE
EEGAEARSASLEGPTVPALRKLAIDGNVPPILSSRTRSRKTPHRCGGGAL
HCFLPAIEAEEENGVEDVLACDDGGQMAMQATLDVSEPRNRRQAMESHEW
DEWRKAEETEMLGMVENCVYDQVARPKDKLVIGTKMLYKRKIGQDGKVEK
YKCRLVAQGFWQVEGVHYTEKYSPTPSAASIRMLLATAAAKDGELRHFDA
EQADPRRVPEVVDGEAEMVVVVHVDDILAHAKDQATMNRFAAELGRKFKL
KDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFNVKKEAKIPAAS
GAQTLSKADEPQNPEEKEEMKMFPYREAVGALMWAATMTRPDIACAVRAV
ARFCENPGLAHKKAVMKIFQYLLHTKEWGITYGGQGCGLCMEAYTDSDVG
ACLDTRRSVSGAVLMLAKGAISWHSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2