prot_A-nodosum_M_contig1206.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1206.2.1
Unique Nameprot_A-nodosum_M_contig1206.2.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length57
Homology
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A7S6ZPC8_9STRA (Elongation factor Tu, chloroplastic n=2 Tax=Stramenopiles TaxID=33634 RepID=A0A7S6ZPC8_9STRA)

HSP 1 Score: 83.2 bits (204), Expect = 2.300e-17
Identity = 45/57 (78.95%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT  L+L GSS AKKYEDI AAPEERA RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITATLALGGSSAAKKYEDIDAAPEERA-RGITINTAHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: UPI001AEB9707 (GTP-binding protein n=1 Tax=Asticcacaulis solisilvae TaxID=1217274 RepID=UPI001AEB9707)

HSP 1 Score: 78.6 bits (192), Expect = 2.560e-17
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+ L+  G + AKKYEDI AAPEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITMTLAKSGGATAKKYEDIDAAPEEKA-RGITINTAHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A0G1U425_9BACT (Elongation factor Tu n=1 Tax=Microgenomates group bacterium GW2011_GWF2_47_9 TaxID=1618541 RepID=A0A0G1U425_9BACT)

HSP 1 Score: 77.8 bits (190), Expect = 2.930e-17
Identity = 41/57 (71.93%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLT+AITVVL+  G + AKKYEDI AAPEER  RG+TIN    E
Sbjct:   15 NIGTIGHVDHGKTTLTSAITVVLAKKGLAVAKKYEDIDAAPEERQ-RGVTINLSHQE 70          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A328B4G3_9CAUL (Elongation factor Tu (Fragment) n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A328B4G3_9CAUL)

HSP 1 Score: 79.7 bits (195), Expect = 6.680e-17
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+VL+  G + AKKYEDI AAPEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITMVLAKTGGATAKKYEDIDAAPEEKA-RGITINTAHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A6B3ULB9_9CAUL (Elongation factor Tu (Fragment) n=1 Tax=Caulobacter sp. 17J65-9 TaxID=2709382 RepID=A0A6B3ULB9_9CAUL)

HSP 1 Score: 75.5 bits (184), Expect = 8.390e-17
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITIN 52
            NIGTIGHVDHGK TLTAAIT+ L+  G + AKKY++I AAPEE+A RGITIN
Sbjct:   14 NIGTIGHVDHGKTTLTAAITMTLAKSGGATAKKYDEIDAAPEEKA-RGITIN 64          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A7C9PXU0_9CYAN (Elongation factor Tu n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9PXU0_9CYAN)

HSP 1 Score: 80.5 bits (197), Expect = 2.160e-16
Identity = 42/57 (73.68%), Postives = 46/57 (80.70%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+ L+  GS+ AKKYEDI AAPEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITLALAAQGSAEAKKYEDIDAAPEEKA-RGITINTAHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A3D1PIW0_9CYAN (Elongation factor Tu (Fragment) n=1 Tax=Cyanobacteria bacterium UBA11049 TaxID=2055787 RepID=A0A3D1PIW0_9CYAN)

HSP 1 Score: 74.7 bits (182), Expect = 2.710e-16
Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+ L+  G + AKKY++I AAPEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITMTLAALGQAKAKKYDEIDAAPEEKA-RGITINTAHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A7C6FPS0_9FIRM (Elongation factor Tu (Fragment) n=1 Tax=Clostridiales bacterium TaxID=1898207 RepID=A0A7C6FPS0_9FIRM)

HSP 1 Score: 74.3 bits (181), Expect = 3.370e-16
Identity = 39/57 (68.42%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+VLS  G + AK Y++I  APEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITMVLSAGGHAQAKHYDEIDKAPEEKA-RGITINTSHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: UPI001FB86B9B (GTP-binding protein n=1 Tax=Brevundimonas terrae TaxID=363631 RepID=UPI001FB86B9B)

HSP 1 Score: 74.3 bits (181), Expect = 3.650e-16
Identity = 39/57 (68.42%), Postives = 43/57 (75.44%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLTAAIT+ L+  G + AK Y DI AAPEE+A RGITIN    E
Sbjct:   14 NIGTIGHVDHGKTTLTAAITITLAKAGGATAKAYADIDAAPEEKA-RGITINTSHVE 69          
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Match: A0A0G0SG06_9BACT (Elongation factor Tu n=1 Tax=Candidatus Woesebacteria bacterium GW2011_GWA1_40_43 TaxID=1618553 RepID=A0A0G0SG06_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 4.000e-16
Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
Query:    1 NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGITINCERSE 57
            NIGTIGHVDHGK TLT+AIT+VL+  G + AKKYEDI +APEE+  RG+TIN    E
Sbjct:   17 NIGTIGHVDHGKTTLTSAITMVLAKQGLAVAKKYEDIDSAPEEKE-RGVTINLSHQE 72          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1206.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S6ZPC8_9STRA2.300e-1778.95Elongation factor Tu, chloroplastic n=2 Tax=Strame... [more]
UPI001AEB97072.560e-1771.93GTP-binding protein n=1 Tax=Asticcacaulis solisilv... [more]
A0A0G1U425_9BACT2.930e-1771.93Elongation factor Tu n=1 Tax=Microgenomates group ... [more]
A0A328B4G3_9CAUL6.680e-1773.68Elongation factor Tu (Fragment) n=5 Tax=Alphaprote... [more]
A0A6B3ULB9_9CAUL8.390e-1773.08Elongation factor Tu (Fragment) n=1 Tax=Caulobacte... [more]
A0A7C9PXU0_9CYAN2.160e-1673.68Elongation factor Tu n=1 Tax=Oscillatoria sp. SIO1... [more]
A0A3D1PIW0_9CYAN2.710e-1668.42Elongation factor Tu (Fragment) n=1 Tax=Cyanobacte... [more]
A0A7C6FPS0_9FIRM3.370e-1668.42Elongation factor Tu (Fragment) n=1 Tax=Clostridia... [more]
UPI001FB86B9B3.650e-1668.42GTP-binding protein n=1 Tax=Brevundimonas terrae T... [more]
A0A0G0SG06_9BACT4.000e-1666.67Elongation factor Tu n=1 Tax=Candidatus Woesebacte... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000795Translational (tr)-type GTP-binding domainPRINTSPR00315ELONGATNFCTcoord: 1..14
score: 72.99
coord: 46..54
score: 59.51
IPR000795Translational (tr)-type GTP-binding domainPFAMPF00009GTP_EFTUcoord: 1..54
e-value: 1.6E-9
score: 37.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..57
e-value: 3.6E-10
score: 41.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 1..53
NoneNo IPR availablePANTHERPTHR43721ELONGATION FACTOR TU-RELATEDcoord: 1..54
NoneNo IPR availablePANTHERPTHR43721:SF5ELONGATION FACTOR TU, CHLOROPLASTICcoord: 1..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1206contigA-nodosum_M_contig1206:152421..152591 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1206.2.1mRNA_A-nodosum_M_contig1206.2.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1206 152421..152591 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1206.2.1 ID=prot_A-nodosum_M_contig1206.2.1|Name=mRNA_A-nodosum_M_contig1206.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=57bp
NIGTIGHVDHGKITLTAAITVVLSLDGSSNAKKYEDIGAAPEERAARGIT
INCERSE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000795T_Tr_GTP-bd_dom
IPR027417P-loop_NTPase