prot_A-nodosum_M_contig120.12.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig120.12.1
Unique Nameprot_A-nodosum_M_contig120.12.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length560
Homology
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI)

HSP 1 Score: 226 bits (576), Expect = 1.020e-61
Identity = 132/247 (53.44%), Postives = 168/247 (68.02%), Query Frame = 0
Query:   13 SKLRTAARAAYWGWKAFQLLRVCAGDITVIAELAAELLAEGL----INREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLALCGD-KDDSVILEAADRIYNTFMECDRDGSGAVSLEEFVVFCSKEGMSASDAEEMFFRXXXXXXXXXXXXXWTAMMNGRVGRDPKSFDCGGHHGLVVYTASCNGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISP-GSLNCG 253
            SK R    AAYWG+KAFQ LR+C+GD+T +AE+AAELL +GL    +   G   +++A+  VV+ Y  I+ FR +V NF++F  AL+ QL   G  + +   +++A+ +Y  F ECD DGSG +S+EE+V FCS+EG+  S AE     XXXXXXXXXXXXXWTAMM GRVGRD  SF+CGG+HGLV Y A  NG+ CDFC  PI AG  A GCRRC+CDACA CSG    P PP ++ P G L  G
Sbjct:   31 SKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGM--ILEAVEAVVSAYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTECDSDGSGGISIEEYVYFCSREGVPRSVAETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESG 275          
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE)

HSP 1 Score: 224 bits (571), Expect = 5.560e-61
Identity = 119/254 (46.85%), Postives = 159/254 (62.60%), Query Frame = 0
Query:    4 RLMVPSKSASKL---RTAARAAYWGWKAFQLLRVCAGDITVIAELAAELLAEGL----INREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLALCGD-KDDSVILEAADRIYNTFME--CDRDGSGAVSLEEFVVFCSKEGMSASDAEEMFFRXXXXXXXXXXXXXWTAMMNGRVGRDPKSFDCGGHHGLVVYTASCNGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISP 247
            +L  P+K  S+L   R    AAYWG+KAFQ LR+C+GD+T + E+AAELL +GL    +   G   + +A++ VV+ Y  I+ FR +V NF++F  AL+ QL   G  + +   +++A+ +Y  F +  CD DGSG +S+EE+V FC +EG+  S AE  FF+             WTAMM GRVGRD  SF+CGGHHGLV Y A  NG+ CDFC  PI AG  A GCRRC+CDACA CSG    P PP ++ P
Sbjct:   24 KLAKPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTTLVEIAAELLDQGLCAGLVANPGM--IFEAVQAVVSAYGGIQSFRKNVKNFAQFSEALSKQLNADGKTQTNGRAMDSAEHLYTMFTQACCDSDGSGGISVEEYVYFCGREGIPRSVAETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPP 275          
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Match: A0A7S4K5J6_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4K5J6_GUITH)

HSP 1 Score: 59.3 bits (142), Expect = 1.380e-5
Identity = 37/120 (30.83%), Postives = 53/120 (44.17%), Query Frame = 0
Query:  185 FDCGGHHGLVVYTASCNGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISP----GSLNCGRGHGLALFYV--TAWMECDWCRRGVGAGNVAAGCRACNCDACMECIT 298
            F CGG+H L  + A      C+ C++ +   S    CR C+ D C  C   V   +  +KI          C   H L  F    + W  CD CR  +  G +  GCR C+ D C+EC++
Sbjct:  228 FQCGGNHPLSCHRAKTYQYECNLCRESLPMKSLVFSCRECDWDGCGLCYARVG--MKDAKIDMQTEVAKHVCPSQHVLYEFSTPNSEWA-CDTCRSEIAQGAIMYGCRECDWDICIECLS 344          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7G0S5_ECTSI1.020e-6153.44Calcium dependent protein kinase n=1 Tax=Ectocarpu... [more]
A0A6H5K5X6_9PHAE5.560e-6146.85EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A7S4K5J6_GUITH1.380e-530.83Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainSMARTSM00054efh_1coord: 149..177
e-value: 0.044
score: 22.9
coord: 115..143
e-value: 0.029
score: 23.5
IPR002048EF-hand domainPFAMPF13499EF-hand_7coord: 115..174
e-value: 3.8E-7
score: 30.5
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 145..180
score: 12.002819
IPR002048EF-hand domainCDDcd00051EFhcoord: 120..174
e-value: 3.37305E-13
score: 62.5653
NoneNo IPR availableGENE3D1.10.238.10coord: 51..178
e-value: 1.5E-17
score: 66.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 450..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 433..479
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 86..176

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig120contigA-nodosum_M_contig120:143125..146016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig120.12.1mRNA_A-nodosum_M_contig120.12.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig120 137979..147626 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig120.12.1 ID=prot_A-nodosum_M_contig120.12.1|Name=mRNA_A-nodosum_M_contig120.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=560bp
MSVRLMVPSKSASKLRTAARAAYWGWKAFQLLRVCAGDITVIAELAAELL
AEGLINREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLAL
CGDKDDSVILEAADRIYNTFMECDRDGSGAVSLEEFVVFCSKEGMSASDA
EEMFFRADIDGNGGISFEEWTAMMNGRVGRDPKSFDCGGHHGLVVYTASC
NGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISPGSL
NCGRGHGLALFYVTAWMECDWCRRGVGAGNVAAGCRACNCDACMECITAD
LASNSASLLTCPGRHGLALTRTSIPGYVCDFCKADVATDVPIFSCRLCQV
DACPPCMWINHNKVLKSGGAFACNGNHTLQTIHIMHYWQLQSHKCSCCRG
SPTLGERMLWCDICSVSVCNACLASNPTRGGPSRRPPPPSYHECLSPRAD
DAFPPPPPPRPEGGAKRSPPPRYDDFQEHVACPELHTPRPAAVKPPFRID
AVVRVVGALEDDVEGKLMTVLGFDPDGKSIGEEECGVVVTQRRGKVYRVP
ERYVFTVVD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom
IPR011992EF-hand-dom_pair