|
|
Homology
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Match: D7G0S5_ECTSI (Calcium dependent protein kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0S5_ECTSI) HSP 1 Score: 227 bits (578), Expect = 5.400e-58 Identity = 135/259 (52.12%), Postives = 174/259 (67.18%), Query Frame = 2
Query: 5156 RLMVPSKSASKL---RTAARAAYWGWKAFQLLRVCAGDITVIAELAAELLAEGL----INREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLALCGD-KDDSVILEAADRIYNTFMECDRDGSGAVSLEEFVVFCSKEGMSASDAEEMFFRXXXXXXXXXXXXXWTAMMNGRVGRDPKSFDCGGHHGLVVYTASCNGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISP-GSLNCG 5905
+L P+K S+L R AAYWG+KAFQ LR+C+GD+T +AE+AAELL +GL + G +++A+ VV+ Y I+ FR +V NF++F AL+ QL G + + +++A+ +Y F ECD DGSG +S+EE+V FCS+EG+ S AE XXXXXXXXXXXXXWTAMM GRVGRD SF+CGG+HGLV Y A NG+ CDFC PI AG A GCRRC+CDACA CSG P PP ++ P G L G
Sbjct: 19 KLARPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTALAEIAAELLDQGLCAGLVANPGM--ILEAVEAVVSAYGGIQSFRKNVKNFAQFSAALSKQLNGDGKTQTNGRTMDSAEHLYTMFTECDSDGSGGISIEEYVYFCSREGVPRSVAETTXXXXXXXXXXXXXXXXWTAMMMGRVGRDKDSFNCGGNHGLVQYVAVYNGMACDFCGTPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPPRGGLESG 275
BLAST of mRNA_A-nodosum_M_contig120.12.1 vs. uniprot
Match: A0A6H5K5X6_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5X6_9PHAE) HSP 1 Score: 225 bits (574), Expect = 1.910e-57 Identity = 119/254 (46.85%), Postives = 159/254 (62.60%), Query Frame = 2
Query: 5156 RLMVPSKSASKL---RTAARAAYWGWKAFQLLRVCAGDITVIAELAAELLAEGL----INREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLALCGD-KDDSVILEAADRIYNTFME--CDRDGSGAVSLEEFVVFCSKEGMSASDAEEMFFRXXXXXXXXXXXXXWTAMMNGRVGRDPKSFDCGGHHGLVVYTASCNGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISP 5887
+L P+K S+L R AAYWG+KAFQ LR+C+GD+T + E+AAELL +GL + G + +A++ VV+ Y I+ FR +V NF++F AL+ QL G + + +++A+ +Y F + CD DGSG +S+EE+V FC +EG+ S AE FF+ WTAMM GRVGRD SF+CGGHHGLV Y A NG+ CDFC PI AG A GCRRC+CDACA CSG P PP ++ P
Sbjct: 24 KLAKPTKDLSQLSKFRNGGSAAYWGYKAFQALRLCSGDVTTLVEIAAELLDQGLCAGLVANPGM--IFEAVQAVVSAYGGIQSFRKNVKNFAQFSEALSKQLNADGKTQTNGRAMDSAEHLYTMFTQACCDSDGSGGISVEEYVYFCGREGIPRSVAETTFFQADIDGNGQISFEEWTAMMIGRVGRDEDSFNCGGHHGLVQYVAVFNGMACDFCGAPIQAGFFAKGCRRCDCDACATCSGLPTTPAPPPQLPP 275
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Stop | 1 |
| Start | 1 |
| Model size | 3452 |
| Hectar predicted targeting category | mitochondrion |
| Exons | 6 |
| Cds size | 1680 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866626.1107688-UTR-A-nodosum_M_contig120:137978..138140 | 1680866626.1107688-UTR-A-nodosum_M_contig120:137978..138140 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig120 137979..138140 + |
| 1680866626.1640291-UTR-A-nodosum_M_contig120:146016..147626 | 1680866626.1640291-UTR-A-nodosum_M_contig120:146016..147626 | Ascophyllum nodosum dioecious | UTR | A-nodosum_M_contig120 146017..147626 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1680866626.121433-CDS-A-nodosum_M_contig120:143124..143223 | 1680866626.121433-CDS-A-nodosum_M_contig120:143124..143223 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig120 143125..143223 + |
| 1680866626.1301265-CDS-A-nodosum_M_contig120:143447..143835 | 1680866626.1301265-CDS-A-nodosum_M_contig120:143447..143835 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig120 143448..143835 + |
| 1680866626.138181-CDS-A-nodosum_M_contig120:144032..144210 | 1680866626.138181-CDS-A-nodosum_M_contig120:144032..144210 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig120 144033..144210 + |
| 1680866626.1462848-CDS-A-nodosum_M_contig120:144476..144848 | 1680866626.1462848-CDS-A-nodosum_M_contig120:144476..144848 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig120 144477..144848 + |
| 1680866626.1546965-CDS-A-nodosum_M_contig120:145373..146016 | 1680866626.1546965-CDS-A-nodosum_M_contig120:145373..146016 | Ascophyllum nodosum dioecious | CDS | A-nodosum_M_contig120 145374..146016 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig120.12.1 >prot_A-nodosum_M_contig120.12.1 ID=prot_A-nodosum_M_contig120.12.1|Name=mRNA_A-nodosum_M_contig120.12.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=560bp
MSVRLMVPSKSASKLRTAARAAYWGWKAFQLLRVCAGDITVIAELAAELL AEGLINREGFSTLVKAIRNVVNLYDDIEGFRASVTNFSRFFRALANQLAL CGDKDDSVILEAADRIYNTFMECDRDGSGAVSLEEFVVFCSKEGMSASDA EEMFFRADIDGNGGISFEEWTAMMNGRVGRDPKSFDCGGHHGLVVYTASC NGLFCDFCKDPILAGSPAAGCRRCNCDACAKCSGFVPPPLPPSKISPGSL NCGRGHGLALFYVTAWMECDWCRRGVGAGNVAAGCRACNCDACMECITAD LASNSASLLTCPGRHGLALTRTSIPGYVCDFCKADVATDVPIFSCRLCQV DACPPCMWINHNKVLKSGGAFACNGNHTLQTIHIMHYWQLQSHKCSCCRG SPTLGERMLWCDICSVSVCNACLASNPTRGGPSRRPPPPSYHECLSPRAD DAFPPPPPPRPEGGAKRSPPPRYDDFQEHVACPELHTPRPAAVKPPFRID AVVRVVGALEDDVEGKLMTVLGFDPDGKSIGEEECGVVVTQRRGKVYRVP ERYVFTVVD* back to topmRNA from alignment at A-nodosum_M_contig120:137979..147626+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_A-nodosum_M_contig120.12.1 ID=mRNA_A-nodosum_M_contig120.12.1|Name=mRNA_A-nodosum_M_contig120.12.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=9648bp|location=Sequence derived from alignment at A-nodosum_M_contig120:137979..147626+ (Ascophyllum nodosum dioecious) TTCTAATTACTTGTATGGTGCAGGTTGTGGAAACCCTACTCGTGTGTCAA
AACTACTAATAGATGATGCTGCCTCGTTCACTCTCTTCAGAGAAACTGTT
CGTCTGAGCCAACGGAAACCCGCGCTTCGTGCTGCTTCTGACGCCCCGGC
CTTGGAGATAACGTAAGAACCTTGGCAGCTCTCCTTAGTGGATATATACC
GCTTGATTCTGCCGAATCTACTGTTCATCAGGGTAGTTATTTGGGCTTCT
CCTGTACTCTAACAACGTATCACCGGTTGAGTACACGATGCTGTTGTGAC
TACTTTTACGAATATTTAAAGCAAAATATGAACGCAGCTAGACCTTTCTG
AGCAACACGAACTGCTTGCATTAGAGATAACCCGCAGCGCGCACTTTGAC
AAGGCACGTAGCTACCTTCAATACATCCACGCTCCTAAAGTTTTCGACCT
TGAAGGTTTTCATACGTTGCCGCACCGCCGGAACTTCTGGGCGTATTTTG
ACTCCACTACCCACTATCGTAGAGTCGTATAACTTTTTGTCGCGATTTGG
TTCCCTGTTGGTCTGAGTAGCGGGTTGTCATCATGATGTGACCCGTTGAC
CTTCGTACCTCTCGCGCGAACTGGGATTTTTCCTCACAAAAAATGAAAAA
AGAAAAAGAAAAAAAATCATGCACAAGTGGAGAATTCGACTTCACGGTCG
ACTAGGGAAAGGGACGGCGAATCCTTCTCGCGATAAAAATTAAGGCAAGC
ACCGCAGAAGAAGGAAGGTGAAGAAATCCTGCGTAGACTTCCTCCTGTGT
GACCCCGGCTGGTGCGTCCACAAATCTGACGTCCAGAATAAATGGGATGA
CAACATACACCTCTTTGTGATCACAAGCGGGATTGGCATTTGATAGGTCT
ATGGCTGACTTGTTGTGTCACCGTAGTTTCTTCAGTTGCAAGGACAATAC
GCTGAACGTGTGAATCAACTTTCCCCCCCTGACTGGGACCAATATCATAG
TGGGTGTGGGAAAGAGAGGCGCATATTAATTGGTCCATGGGTGATCTGCC
AAGGCAGCACCCGTTCGGAACTACCTTGAGGTTTACTGGCCCTGTGCCGG
CGGACTCTCGGCAGTGAACGCTATCGGTACGCAACTGCGTGACCCGATAA
ACTCGGGACTGACTTGATGGCGTATGGCGGTTTCATATGGACGCCGCCGC
GGAACTCGGGAGAAATCCCGTAAGTAAGCCCCAGATTCAGCCTGAGTATG
GAGATGAGCAGACTGACGCGGAACGGGACGGCTGAACCCGTCTCGCGAGA
CCAAAATCTCAGCCACGCACGGGGACAGGGGGATATTCATTTTCCCTCTT
CAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCT
GCTACATGTGATGACCATACATACTTCGTACTCGTATAAGTAGTGCGTGT
AAGAGAGCACACTATTAAATATATTAAATATACCTCAAGGACTCAGTAAT
TTCTCCGTTGAGCTCAAAGCAGCGCTGTCCGGGCGGATTCCTGATCCTAG
ACCGTTGTTACAATTTCGTACGGAGATACTCGTTGTGATCGTGTTCCAGT
GACCACGGCTGTCCCCGACTTTCCTTTACAGATGAAAATACGGACAGTGG
CCAAGTGGACTAAGGTTTTAGGTACTATACAGTGTAGATTCGAATCCCAC
CTCGTTCAAATATTGATACAGTAGCTCTGGTCTAATGCCTCGAAACAGCA
CAGACCCAATTATATTATTCTTGATGCTACAGTTAGTACCACTTCTGTTT
GTAATAGCAATTGCTGTACAAGTACCACCAGTGGATGAGTGAGTGCGAGT
AAAGAAGGGAACCTTGGCCTAAAACCGGGACATTGGCGCAGTGCCATACT
AAACAGTCCTACAGCATATTTCGTTGATGTTACATACATCGGGTTGCAAC
CCAACCAAATAGTAATGGCTGCCGGACAAGAACAACAACTGACCCATGGT
TACCACCATCGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTCTTTG
CAGCCTATGAAGCAACAATTTTAAGAGTCCAGAAAAAGAAAAGGACGCGA
GCCCCAGAGGATTTTCACCGAACCTGCCGGTTTGAAAAAAAATAAAGAAG
TATGTGAAAATACTCAAGAGTTTTCACATCTCGTGCCCTCTCCCTCCGAA
ACCTGGTTTCGGGGTATGGATGCGGGAGGGTCTTTCCGGCGGATGTAGGG
CCGGGCTCACCCTCAAGAGATGCAGTCAACTGGCTGCCTTCGCGATTCAG
CCTGTCGGTTGAGACGCGGCGGCGGTATGGTTGGCTGAGGATGATGGTGT
TCCCAGGTGCGCGCCTCTTCCGAGCCCCAATTTGGTGCCCTTCGGGAGGG
TGGCGGCACGCGAGAGGCAGGGAGCACTGTCGCGGAGAGCCTGGTTGTTC
TCTATCGGGTGGGTACGCACCAAATTCGGCGAAGGCGGAGGGCAGCTCGA
TCGTCGACGAGCCAGGGGAGGGCTGAACCCCTGTGCGCGAGAATCACAGG
CTTGAACCGGGAGGTTTCTGAGGGAAAAGCCGATGTCTGACCACGGTCGT
AATTTTTCTTCCTACGAGGGCCACAAGGAGCGGCGAACGGGCAAGATTCG
TGGGGATTTTTCAAGGATACACAGGGCTTTGGACGGCTGGATGCTAGCTC
GCGCGCCGGCTTCACCAGCTCAAGGCCTCCACCACCATGGACCTCGGTAT
TTCATTTTTTCTTATTTCTGTACAATGTTTGGCCTTGAGAACTTGGACTT
GTTGATCAAAACTGGTTGGAGCGTAATTTTTCCGGTTTTTTGCTGAGAAC
GCTGGTCGTGGGTAGGCGACAACATTCCGAGTCGATCGAGGTTGCTCTCG
ATATGGAGTAAGGAGATTTGATGAACCATTTTGATATTGGTCGGTGCCAT
TGCTTGTAGAGCCGCATAACGTTTTGTCGCGATTTGGATCCCTGTTGGTC
TGAGTAGCGGGTTGTCACCATGATGTGACCCGTTGACCTTCGTACCTCTT
TGTGACCACAAGCGGGATTGGCATTTGATGGGTCTATGGCTGACTTGTTG
TGTCACCGTAGTTTCTTCACTTGCAAGGACAATACGCTGAATGTGTGAAT
CATCAACAACAACAACAACAACAAAAATAGCACCATCCTCTCTCTTCAAA
CCTCCTTGGCCGCGCTAAAGTGAACCTCTGTTACAGCAGACCTCTTTCAC
AGCATAGCATAATAACTGTAGCGCATGATTTGTACCAGAGGGTACATTGC
TGCGCAACGTTACCGTCTGTAGAAAATGAGATTTGCAATACTCCTACAAC
AACAGCTACATTTTTGTGCATTTTTTCCACCCTGACTGGGGGATGCCCAG
AAGGTCTAGGCGCGTTCTGATTATTCTTTAAACAGCTACCAGCACACATT
ATTACCGTATCACGATAATACTACTGTACTTTTAATACAATTGGTCGATG
GTGATGCAAAGGCTACCTTGAGGACTTCTGGCCCTGTGCCAGCGGACTCT
CGGCCGGGACTAACCCGATGGCGTGTGTGTGGCGGTTCAAATAAATGGAC
ACCGCCGCGGAAATGGGGAGGAATCCCGTGAGTAAGCACCAGATTTAGCC
TGGGTATAGGGAATAAGTAGGCTGACGCGGGACGGGACGGCCGAATCCGT
CTCGCGAAATCAATTTCTCAGGCGCGAACGGGTACAGGGATTTTTTTTCA
TTTTCCCTGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTG
ATCCATGCTCTTGCTATATGTGTGACCATACATATACATTTTTTTTTTTT
CTTCTAGAAAACTTACCACGAGCAGGATTGGCAACCTTACCCAATCGATT
CATACTCTTGCTACTGTAGACTATATGTGTGACGATACATATACAAACTA
TATACCGTATTTACTATTAATATAGAAACCTATGAAATACTGTAGCAACT
TCAATTACAAGGCGCTCCCCGACATTATACTGTTGACCCAATGTTATCTG
CATCGTGAAGAGGTTTTGTATTTGCAGCCTTTGATCCCACCTAAACGTTT
TGACATTTTCCCCCCATAACCGGGAGATGCTCAGAAGGTCTAGGTGCGCT
CTGATTTTTCTTTAAAAAAAAAAGGTACAGCCGGTCGACCCCGGTAGCTC
AGTTGGCACCTCGTAACCTTCTGACACGTTGGGACGTGAGTTCGATCCCG
GCAAACGGGATTTTTCTCACTAAAAACTAAAAAACCAAAATAAAAATGCC
CAACGGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCGACTTCACG
GTCGACGAGGGAAAGGAATGGCTGAATCCTTCTCGCGACAAAAATCAAGG
CACGCACCGCAGAAGGAAGGTGGATTAAAAATCCTGTGTGACCTTCCTCC
TGTGTGACCCGGGCTGGTACGTCCAACGAACTTGATGTCCAGTACGGATG
GGAAGAAAACACACACACACACAGTACAGCACGATTACAGTACTTACTGT
AGTATTGGAGCATAGTACTGTTCGACTGCATTATATTAGAATATTCTTAC
GGGCAACTCAAGGCAATAAACTATCGATATTAATAACTAATAAGACAAGA
CAGCCCGTTGGGGTGGGGGTTCTTTGATTGTTTTGAGCATTTACTGCGGG
AATTTCACCCTCGAGGATGCCTCCTCGGTCGCTCCTTCCGCCAATTGCCT
ATAGCTTAGCTCGTGACCATGATCCAACCTATGGTCATCGTACCATAGAT
GATGTACAATTCCAACACACAAGTCAGAGGCCCCCCATAGTGTACTCGCG
AATCCTTATTTACTAATACTAATACCAATACTCCGGAGTAGTACTTGTTT
TTCGACGACTTGTTAGATCCACAACGAACCTGGCCAATATCCTGGCCAAT
ATCGCATTGTCCTCCTGACATCTCTCTCGCTGCGTGAAGCGCACCGGGAT
TTCATAAAGAGAGAGATGCTGAAGACTTGCGGATGACCGCCGAGAGTTGT
AGAACACTGGAGCAAAAGCCCAATGACTTTCCCGCTCGCATTTTTTCTGC
GCCGGACGACGCCAAATTCTGGACCCTATCCATCCTCTCTTGGCAGATGA
GTGTTCGTCTCATGGTGCCTTCCAAAAGCGCGTCCAAGCTGAGAACTGCA
GCAAGGGCAGCGTACTGGGGCTGGAAGGCCTTCCAGCTCCTACGAGTGAG
CTACTGTACTATAATTATGTTTACAGTAGACTACAGTGTAGACGATCACG
CCGCGAAAAATGGCGCATTTTGTTCGGAATCTCTTCGCCGCTTTCTCCAA
ACAGAGGGGCTCCATTTGATCCTGAAACCGCTCAGAACAACTATTCCTTT
CATTATTATCAATTGCAACAACGAAACTACCGGGCTTTGTTGGACTGCGT
TCCGTCGTTTTTCAATCAGGTTTGTGCAGGGGACATCACCGTGATAGCCG
AGCTCGCTGCAGAGCTCCTCGCAGAGGGTCTCATAAACCGAGAGGGGTTT
AGTACGTTGGTTAAAGCCATCAGAAACGTCGTCAATTTGTACGATGACAT
CGAGGGATTCAGGGCCTCGGTCACGAACTTCTCGCGTTTTTTTCGAGCTC
TGGCGAATCAGCTTGCGTTGTGCGGGGACAAAGACGACAGCGTTATCTTG
GAGGCAGCGGATCGGATCTACAACACGTTCATGGAGTGTGACCGGGACGG
GTCTGGCGCCGTGTCGCTGGAAGAGTTCGTCGTTTTCTGCAGCAAGGAGG
GCATGTCGGCCAGCGATGCAGAGGAAATGTTCTTCAGGGCAGACATTGAC
GGCAATGGCGAGTTCTCATTACGATTATGAACACTACATTTTCCACGCTA
GCGAGATCCAGTGAGCTAGAGCTCTAAATACGTAAACCGCGGATGGAGAC
AAGGCGTTGTGTTCCGCTAGTTTCTACTCAGCGACCCGACAAATCTGTTT
TATCTTTACGTTTCGACTCCTCCCGCCCCCCCCACCCCGTTTACGCCTCC
CCAGGTGGAATCTCTTTCGAGGAGTGGACAGCAATGATGAACGGAAGGGT
TGGCCGCGATCCGAAGAGTTTCGATTGTGGTGGCCACCACGGGCTAGTTG
TGTACACGGCATCTTGTAACGGATTATTTTGTGATTTCTGCAAGGATCCC
ATCTTGGCAGGGTCCCCGGCCGCGGGTTGCAGGTAAAAAGTGTGCCGTTT
GCAACAACATACTGGTTACAGTGGTGCGGTCAGCAGAGGCCAAGAATATG
GAGTGTACGTCCGCGGCGATGCTGATTTCATTGAGATATACGGGTAAGAT
CGGCCGCGTTTTTTCTTCGTTTTCACGGACGACACTTGCCCACTTACCAT
GAAAACGCATATTTCCCATTAGGAAAACCGTGCCCGAACGTCGCCAACCC
CAAGCTTCTCGCTGCTTGCGTTCCCTGCCTCCCATCATCGAAATCAAGGC
GCTGCAACTGTGACGCCTGCGCGAAGTGCTCTGGATTCGTGCCCCCGCCG
CTACCTCCGTCGAAAATCTCTCCCGGGAGTTTAAACTGCGGCCGTGGTCA
CGGACTAGCGCTCTTTTACGTAACGGCCTGGATGGAATGTGACTGGTGCA
GGCGGGGCGTCGGCGCGGGCAACGTGGCTGCTGGCTGCAGGGCGTGCAAC
TGCGACGCATGTATGGAATGTATTACGGCGGACCTCGCGTCGAACTCCGC
GAGCCTCCTTACTTGCCCCGGGCGACACGGACTGGCGTTGACGCGAACCT
CGATTCCCGGCTACGTCTGCGACTTTTGCAAAGCGGATGTTGCTACTGAC
GTTCCCATCTTCAGCTGCAGGTCTGTGTTACATTCTGTGTGTATGTGTGT
GTGTGTGTGTGAGAGAGAGAGTATGTGTGTGTTTGTGCGTGTCTTTTATA
TTTAGCGTATCTGGTGTATACCTTTAACGGATGAGACGGGGATGTAGACG
CAATTTGTTGCGTGCGGATGCTGTGAACATCTTGCTATTGATCTCGCGAT
GTTGCTTTCGCCACGAGCTTTCAAGTCGGCGGCAAGCCGAATAACTGTCC
TGAAAGTGAAGGTTCGCCAAAGCGGGTTGGATACCTACCCTGAGAAGACC
CTATGCTCGATATGACGGATGAACGACGGGATGTTTAGGGGTCGATGGAC
GGTCCTCAATTTCACAGTAAAATATTGCGCGTGACGGCCAACCGAGGGGA
TCGGTCGCGAATGCACACATGGCCTAAAGTTGGGTCGTGAGCTTGCTCGG
TTCGACGTAGACTATTGCTGTAACACGAAAAAACTTGAGCCTTCGTTCTC
CTCTTTCTCTCTGCTTGCGACGTTTCTCTTGTACCTCGACGCCAGACTCT
GTCAGGTCGACGCGTGTCCGCCGTGCATGTGGATCAACCACAACAAAGTC
CTCAAATCCGGCGGAGCCTTCGCCTGTAACGGCAACCACACCCTTCAGAC
GATCCACATCATGCACTATTGGCAGCTTCAAAGTCACAAATGCAGCTGTT
GCAGAGGAAGCCCAACTTTGGGAGAACGCATGCTATGGTGCGATATCTGC
AGCGTGAGCGTCTGCAACGCTTGCCTCGCCAGTAACCCGACAAGAGGAGG
CCCCTCCCGTAGACCACCACCTCCATCCTATCACGAGTGTCTATCGCCTC
GTGCCGATGATGCATTTCCACCGCCTCCACCACCACGCCCCGAAGGGGGT
GCCAAGCGAAGCCCTCCGCCTCGGTACGATGATTTTCAGGAGCATGTTGC
TTGTCCCGAGCTGCACACTCCTCGCCCGGCAGCAGTCAAGCCTCCATTCC
GAATAGATGCAGTTGTGCGCGTGGTAGGGGCGCTCGAAGATGACGTGGAG
GGGAAGTTGATGACGGTCTTAGGGTTCGATCCGGACGGGAAGAGTATTGG
CGAGGAAGAGTGCGGCGTGGTAGTGACGCAGAGGAGGGGGAAGGTCTACA
GGGTACCGGAGCGTTATGTTTTCACGGTGGTAGACTAACACACAAGTCGT
CGTTTGCGGAAAAGAGGTGGCCTTGAGGGTCGCACACATGCGAATAAGGC
AGCGTAACACCTCGTGGGGTCGCTTTCAAGGTATGAGCCGCGCGGTGAAT
GGAAGGAATTCTCTGACCGCTCGGTGTGGACAAGCTGTACTCTACCGGGA
ATGCAAAGAGGGCGTTTCCGTCCGAGTCAGGGGGTGTTGAAGAGTTCTAC
AGCCATGACGTAACACTAGGTGTACCGGTGAGCGGCCAACGCAACTCTCG
TATATAGACTACCTCAGTATTGGTTTTGTTGTAGTTGCATTTTCTGCATC
CCGTCAAAAACGCACAGCTTACAGCTATACCGTGTCCCAGAGTGTCGCTT
GACCTCAAGGCCGGAATGGCGAGGACCAAGTAGATCGGCGCTCTACTGTT
TATAAGATCATGTAGAGATATGGACACTACGCCAAGAGCACCGCAGTAGA
CTCCGCACCGTGCACTACCGGGTTCTGCTACACATCATCATCGAAGTGGG
AGCTCAGTGTCAAAACCATCGCAAGCGCATCGAGATGACTGCAGGGACGA
GTATGGGTAACGGATCCCCGCGGTGCTCATTTTGGAGCCACTCGACAGCA
CGGGGAGCAGGAGCTGTGGACCACGGTGATAAAGTGGAACTTCGAGCGTA
CTACGGTAGTCTTTGGGGGTCCCAAAGAACTTTGACGTTGCAAGATGGCG
AATGCTGGTTTTTTGTTGCTCTAGTGAAAGAGGGGCGGAGGTTCATGGAA
GCGTGGGACAATTACAAAAGCCGCTCGAAACTCCCCAGCAGGAGGAAATT
GTTGCAAAACGACATGCGAACAACGCTGCTGTTATCCCAAACCAGAGTTT
GTGGTCGGAAAGGATGGTGTGGTTTGTTTAAGAAGGTACAACAAAGTACT
GTATACACGATGGCGTATTAAGGAATGGTGCGAAGAACTCGTTCTAATTA
TAAAACATAAAATTGTCAAAATACGAGTTGACCCTTCATGTGCTGTGTTT
TCTCCTGTCCTAAGACAAACATGCGGTACCTGTGTAATAATAATATACTT
GTTTGTCGCGATGGTTCCCTTGACTCCTACCATAATAGTGTACGTTTTTG
ATGCTGTAGATCCTTAGTTCTTCTAGAGCAGCGAATTTCGTATTAGGGCG
CAGGGGGTATAGAGCTAGCTCCACTCATGGAGTAATATGAGTTTTTTGTA
CCATTATTGTCGTTCTTTGTATGGAGAGTATGTCGTACGTTCTTTCCTTC
CGAATGGCGTTTTTCTAAAATAATAAAAAAATGATAATTTCCCTATTGGG
AGAATTTTTTCTTCCTCTTTTTCCGGGAGGTAACATGTTTGTTTCCCACG
TTTTCTACGTGTACGTTGGTGTGTGTTGTGTGTTTTCTTCCCATTCATTC
TGGACATCAACTTGGACGTACCCGCCGGGGTCACACAGGAGGAAGGTCAC
AAAGGAGTGTTCATCCGCCTTCCTTCTGCGGTGCGTGCCTTAATTTTTCT
CGCGAAAAGGATCCAGCCATTCCTTTCCCTCGTCTACCGTGAAGTCGAAT
TTTGTGTACTAACGATTTAATCGTTCTTCTCCACTCGTTGGGCATTTT back to topCoding sequence (CDS) from alignment at A-nodosum_M_contig120:137979..147626+ >mRNA_A-nodosum_M_contig120.12.1 ID=mRNA_A-nodosum_M_contig120.12.1|Name=mRNA_A-nodosum_M_contig120.12.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1680bp|location=Sequence derived from alignment at A-nodosum_M_contig120:137979..147626+ (Ascophyllum nodosum dioecious) ATGAGTGTTCGTCTCATGGTGCCTTCCAAAAGCGCGTCCAAGCTGAGAAC TGCAGCAAGGGCAGCGTACTGGGGCTGGAAGGCCTTCCAGCTCCTACGAG TTTGTGCAGGGGACATCACCGTGATAGCCGAGCTCGCTGCAGAGCTCCTC GCAGAGGGTCTCATAAACCGAGAGGGGTTTAGTACGTTGGTTAAAGCCAT CAGAAACGTCGTCAATTTGTACGATGACATCGAGGGATTCAGGGCCTCGG TCACGAACTTCTCGCGTTTTTTTCGAGCTCTGGCGAATCAGCTTGCGTTG TGCGGGGACAAAGACGACAGCGTTATCTTGGAGGCAGCGGATCGGATCTA CAACACGTTCATGGAGTGTGACCGGGACGGGTCTGGCGCCGTGTCGCTGG AAGAGTTCGTCGTTTTCTGCAGCAAGGAGGGCATGTCGGCCAGCGATGCA GAGGAAATGTTCTTCAGGGCAGACATTGACGGCAATGGTGGAATCTCTTT CGAGGAGTGGACAGCAATGATGAACGGAAGGGTTGGCCGCGATCCGAAGA GTTTCGATTGTGGTGGCCACCACGGGCTAGTTGTGTACACGGCATCTTGT AACGGATTATTTTGTGATTTCTGCAAGGATCCCATCTTGGCAGGGTCCCC GGCCGCGGGTTGCAGGCGCTGCAACTGTGACGCCTGCGCGAAGTGCTCTG GATTCGTGCCCCCGCCGCTACCTCCGTCGAAAATCTCTCCCGGGAGTTTA AACTGCGGCCGTGGTCACGGACTAGCGCTCTTTTACGTAACGGCCTGGAT GGAATGTGACTGGTGCAGGCGGGGCGTCGGCGCGGGCAACGTGGCTGCTG GCTGCAGGGCGTGCAACTGCGACGCATGTATGGAATGTATTACGGCGGAC CTCGCGTCGAACTCCGCGAGCCTCCTTACTTGCCCCGGGCGACACGGACT GGCGTTGACGCGAACCTCGATTCCCGGCTACGTCTGCGACTTTTGCAAAG CGGATGTTGCTACTGACGTTCCCATCTTCAGCTGCAGACTCTGTCAGGTC GACGCGTGTCCGCCGTGCATGTGGATCAACCACAACAAAGTCCTCAAATC CGGCGGAGCCTTCGCCTGTAACGGCAACCACACCCTTCAGACGATCCACA TCATGCACTATTGGCAGCTTCAAAGTCACAAATGCAGCTGTTGCAGAGGA AGCCCAACTTTGGGAGAACGCATGCTATGGTGCGATATCTGCAGCGTGAG CGTCTGCAACGCTTGCCTCGCCAGTAACCCGACAAGAGGAGGCCCCTCCC GTAGACCACCACCTCCATCCTATCACGAGTGTCTATCGCCTCGTGCCGAT GATGCATTTCCACCGCCTCCACCACCACGCCCCGAAGGGGGTGCCAAGCG AAGCCCTCCGCCTCGGTACGATGATTTTCAGGAGCATGTTGCTTGTCCCG AGCTGCACACTCCTCGCCCGGCAGCAGTCAAGCCTCCATTCCGAATAGAT GCAGTTGTGCGCGTGGTAGGGGCGCTCGAAGATGACGTGGAGGGGAAGTT GATGACGGTCTTAGGGTTCGATCCGGACGGGAAGAGTATTGGCGAGGAAG AGTGCGGCGTGGTAGTGACGCAGAGGAGGGGGAAGGTCTACAGGGTACCG GAGCGTTATGTTTTCACGGTGGTAGACTAA back to top
|