prot_A-nodosum_M_contig12.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig12.15.1
Unique Nameprot_A-nodosum_M_contig12.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length165
Homology
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: D8LI98_ECTSI (Stc1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI98_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 9.340e-29
Identity = 81/162 (50.00%), Postives = 93/162 (57.41%), Query Frame = 0
Query:    1 MTEDQLKCKDCVSSAAAAERQSAHDARKSTAEG-----EPLLCSVCEQKR-PPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKPQVGADMKRGRXXXXXXXTWRGRASSG 156
            + ED++KCK+CV+ AA  ER+ A    K+++ G     EPL CS C+QK  P   FTNTQARKPD+SRKCR                                  LPKG+ GAAARLKAASAECA EAEKVTGLKP VGA  KRG        TWRGRASSG
Sbjct:   40 LAEDKVKCKECVAKAATEERERASQNSKASSNGGEGKDEPLSCSACKQKSLPRSSFTNTQARKPDASRKCRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPKGAAGAAARLKAASAECAREAEKVTGLKPLVGAG-KRGGRGPGRGRTWRGRASSG 200          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A6H5KHQ9_9PHAE (Stc1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHQ9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 8.660e-11
Identity = 40/71 (56.34%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    1 MTEDQLKCKDCVSSAAAAERQSAHDARKSTA---EG--EPLLCSVCEQKR-PPEDFTNTQARKPDSSRKCR 65
            + ED++KCK+CV+ AA  ER+ A +  K+++   EG  EPL CSVC+QKR P   FTNTQARKP++SRKCR
Sbjct:   59 LAEDKVKCKECVAKAATEERERASENSKASSNDGEGKDEPLSCSVCKQKRLPRSSFTNTQARKPETSRKCR 129          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A7S4C1J3_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C1J3_CHRCT)

HSP 1 Score: 65.1 bits (157), Expect = 7.870e-10
Identity = 51/130 (39.23%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    6 LKCKDCVSSAAAAERQSA---HDARKSTAEGEPLLCSVCEQKRPPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKPQV 132
            L+CK CV SAAAAER+ A      R   A+ E   CS C+   P   F  TQ  K    ++C+ C  A E     A    +   LSEA+    TA +  + S   A +L  ++A  ALEAE+VTGLKP V
Sbjct:   67 LRCKQCVESAAAAEREQAAKRQAERAPAADDEKHTCSACKAALPTSAFNRTQLSKGPEKQRCQQCVAASEQESQAAVEERQRKALSEAK----TAMQRAEASGSVAEKLATSAAHAALEAERVTGLKPVV 192          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A7S0Q163_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q163_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 2.250e-9
Identity = 62/166 (37.35%), Postives = 83/166 (50.00%), Query Frame = 0
Query:    6 LKCKDCVSSAAAAERQ---------SAHDARKSTAEGEPLLCSVCEQKRPPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAARE---ARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKPQV-GADMKRGRXXXXXXXTWRGRASSGQR 158
            ++CK CV  AAAAER+         +A++A   TA  E   CSVC+   P   F  +Q  K    ++C+ C   V T E EA+ A  E   A L+EA+     A +  + S   A +L  ++   ALEAE+VTGLKP V G    RGR       +WRG  S G R
Sbjct:   40 IRCKTCVEEAAAAEREQAAKRQTQRAANEASADTAADEQHTCSVCQLGLPASAFNRSQLSKGAGKQRCQKC---VATNEQEASAAVEERQKAALAEAK----VAMQRAEASGSVAQKLATSATHAALEAERVTGLKPVVLGRGRSRGRG------SWRGGRSGGGR 192          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A7S0JH32_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JH32_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 1.160e-6
Identity = 57/161 (35.40%), Postives = 77/161 (47.83%), Query Frame = 0
Query:    6 LKCKDCVSSAAAAER-QSAHDARKSTAEG--------EPLLCSVCEQKRPPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKPQVGADMKRGRXXXXXXXTWRGRASSGQ 157
            ++CK CV  AA  ER Q+A    +  AEG        +   CS CE   P   F  TQ  K    ++C+ C   V  +E EA+ AA E R   A   +  A +  + S     +L A++   ALEAE+VTGLKP +     RGR       +WRGRA  G+
Sbjct:   40 IRCKSCVEEAAVREREQAAKRQAERIAEGAGGDKFCQDQHTCSACEIVLPASAFNRTQLSKGTEKQRCQQC---VGRSEQEAS-AAVEERQKVALADAKAALRRAEASGSVVEKLTASATHAALEAERVTGLKPVILGRGGRGRGRG----SWRGRAGGGR 192          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A6U1C738_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1C738_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 8.640e-6
Identity = 49/130 (37.69%), Postives = 66/130 (50.77%), Query Frame = 0
Query:    6 LKCKDCVSSAAAAERQSAH---DARKSTAEGEPLLCSVCEQKRPPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKPQV 132
            L CK CV +  A+ER +A     A  +  E E   C+ C+++ P   F   Q RK    ++   C   VE AEA A+ AA +A+  +  G    A K  +    A  +  AA+AECA EAE VTGLKP V
Sbjct:   41 LTCKRCVEADQASERAAAAAQTHAMPAAGEDELHECAACKERLPALRFNKNQLRKKGPGKQ--RCQACVEAAEASASSAAGDAKREKLAGLRQDA-KRAEAVGSAVDKAVAAAAECAAEAELVTGLKPMV 167          
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Match: A0A7S2EBJ1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBJ1_TRICV)

HSP 1 Score: 51.6 bits (122), Expect = 5.100e-5
Identity = 51/140 (36.43%), Postives = 66/140 (47.14%), Query Frame = 0
Query:    6 LKCKDCVSSAAAAERQSAHDARKSTA---------------EGEPLLCSVCEQKRPPEDFTNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKLPKGSLGAAARLKAASAECALEAEKVTGLKP 130
            L+CK CVSSA AAER  A   R + A               E  PL C+ C +      +   Q  K +   +CR+C       E+      RE R+++A+   V AAK   G+  AA  L+A S   ALEAE VTGLKP
Sbjct:   45 LRCKSCVSSAEAAERDLAAARRAAEASSSSKTTSGTNHGQDESIPLTCASCSKSLRLSSYNRNQISKGEGRARCRNCVERAAGDESNRNDREREERIAKAR-EDVEAAKRAGGN-AAAEVLRAESVLAALEAEHVTGLKP 182          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig12.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LI98_ECTSI9.340e-2950.00Stc1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5KHQ9_9PHAE8.660e-1156.34Stc1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S4C1J3_CHRCT7.870e-1039.23Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]
A0A7S0Q163_9EUKA2.250e-937.35Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0JH32_9EUKA1.160e-635.40Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A6U1C738_9STRA8.640e-637.69Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2EBJ1_TRICV5.100e-536.43Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 71..91
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..164
IPR024630Stc1 domainPFAMPF12898Stc1coord: 3..68
e-value: 8.1E-8
score: 32.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig12contigA-nodosum_M_contig12:124707..125586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig12.15.1mRNA_A-nodosum_M_contig12.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig12 124707..126311 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig12.15.1 ID=prot_A-nodosum_M_contig12.15.1|Name=mRNA_A-nodosum_M_contig12.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=165bp
MTEDQLKCKDCVSSAAAAERQSAHDARKSTAEGEPLLCSVCEQKRPPEDF
TNTQARKPDSSRKCRHCSVAVETAEAEATRAAREARLSEAQGASVTAAKL
PKGSLGAAARLKAASAECALEAEKVTGLKPQVGADMKRGRGRGRGRGTWR
GRASSGQRGRSSNT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024630Stc1