prot_A-nodosum_M_contig1195.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1195.10.1
Unique Nameprot_A-nodosum_M_contig1195.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length127
Homology
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 124 bits (310), Expect = 1.630e-32
Identity = 65/121 (53.72%), Postives = 87/121 (71.90%), Query Frame = 0
Query:    8 GSIIVNSSVMSQR--AQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWGGMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGLKA 126
            GSIIVN+SV   R  A    + AG+Y+ASKA  +ML++Y AIEGA  G+RVN+V PG+V+TP++G MP +TL  F    QL  R   P+EIA+ V++LAS+D+TMVTGS + MDG W +KA
Sbjct:  138 GSIIVNTSVTGLRPSALPGLTGAGMYSASKAAAEMLMKYAAIEGAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLASEDATMVTGSTYTMDGGWAMKA 258          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A835ZCI5_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCI5_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.040e-30
Identity = 63/123 (51.22%), Postives = 86/123 (69.92%), Query Frame = 0
Query:    7 GGSIIVNSSVMSQRAQT--AFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWG-GMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGLKA 126
            GGS+I+NSS M+ RA    AF+  G+Y+ASKA  DM+++Y AIE ++H  RVN++ PGIV T + G GM  E+   F   + L GR  TP+EIA  V +LASD++T +TGS+H +DG WGLKA
Sbjct:  137 GGSVIINSSGMALRATANPAFAGGGLYSASKAAADMVMKYAAIEASKHKTRVNSIAPGIVQTAIMGEGMTDESYNAFAAPVSLVGRVGTPEEIAPFVCFLASDEATFITGSVHEVDGGWGLKA 259          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 116 bits (290), Expect = 1.520e-29
Identity = 62/121 (51.24%), Postives = 83/121 (68.60%), Query Frame = 0
Query:    8 GSIIVNSSVMSQR--AQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWGGMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGLKA 126
            GSIIVN+S  + R  A    +  G+Y+ASKA  +ML++Y AIEGA  G+RVN+V+PG V+TP++G MP ETL       QL  R   P+EIA  V++LAS+D+ MVTGS + MDG W +KA
Sbjct:  136 GSIIVNTSSTALRTTALPGMAGGGMYSASKAAAEMLMKYAAIEGAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLASEDAAMVTGSTYTMDGGWAIKA 256          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: UPI001994D12B (SDR family oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=UPI001994D12B)

HSP 1 Score: 98.6 bits (244), Expect = 6.540e-24
Identity = 57/119 (47.90%), Postives = 77/119 (64.71%), Query Frame = 0
Query:    7 GGSIIVNSSVMSQRAQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWG--GMPPETLQGFCKDLQ---LFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDG 120
            GG+I+VN+S+ +Q        + +YAASKA    LVR  A+E A  GIRVNAV+PG ++TPL+G  G+ PE LQGF KDL      GR   P+E+ R+  +L SDDS+ +TG   V+DG
Sbjct:   19 GGAIVVNTSINNQLGMPG---SAMYAASKAAARSLVRVAAVELASQGIRVNAVSPGPIETPLYGKLGLAPEVLQGFAKDLSGKIALGRFGRPEEVGRAARFLISDDSSFMTGEEIVLDG 134          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A835ZCX6_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCX6_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.010e-23
Identity = 59/127 (46.46%), Postives = 80/127 (62.99%), Query Frame = 0
Query:    2 ALNKDGG--SIIVNSSVMSQRAQTAFSTAG--VYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWGGMPP----ETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDG 120
            A+ K GG  SI+VNSSV           AG  VY+ASKA VDMLV+Y A+E A H  RVN++ PG V TP   G+ P      +    K +QL  RA +P+E+A+ V +LASD+++ VTGS+H++DG
Sbjct:  131 AIEKSGGQGSIVVNSSVAGSAVCALPRAAGAAVYSASKAAVDMLVKYAAVEAAPHNTRVNSIAPGTVRTPFLQGVHPGLQDSDIDRGAKGIQLIQRAASPEEVAKFVCFLASDEASFVTGSVHLVDG 257          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A836CPZ3_9STRA (Short-chain dehydrogenase/reductase SDR n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPZ3_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 6.040e-23
Identity = 58/131 (44.27%), Postives = 81/131 (61.83%), Query Frame = 0
Query:    2 ALNKDGG--SIIVNSSVMSQRAQTAFSTAG--VYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWG----GMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGL 124
            A+ K GG  SI+VNSSV    A  +   +G   YAASKA VDMLV+Y A+E A H  R+N++ PG V TP++     G+    +    K +QL  RA +P+E+AR   +L SDD++ VTGS+H++DG   L
Sbjct:  114 AIEKSGGQGSIVVNSSVAGSVASASPLASGNNAYAASKAAVDMLVKYAAVEAALHNTRINSIAPGTVRTPIFQVFAPGIQDNDIDELAKGIQLMQRAASPEEVARFTCFLLSDDASFVTGSVHLVDGGASL 244          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A835ZEC4_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEC4_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 6.360e-23
Identity = 61/126 (48.41%), Postives = 77/126 (61.11%), Query Frame = 0
Query:    2 ALNKDGG--SIIVNSSVMSQRAQTAFSTAGV--YAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTP---LWGGMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDG 120
            A+ K GG  SI+VNSS     A      AG+  YAASKA VDMLV+Y A+E A H  RV +V PG V TP   L+G M    +    K +QL  RA  P+E+AR V +L SDD++ VTGS+H +DG
Sbjct:  135 AIEKSGGHGSIVVNSSAAGSTASAKSVCAGIAPYAASKAAVDMLVKYAAVEAAPHNTRVTSVAPGTVLTPIFQLFGDMKDSEVTDMAKAIQLMQRAGRPEEVARFVCFLLSDDASFVTGSVHSVDG 260          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A6V8KTY4_9ACTN (Uncharacterized protein n=1 Tax=Phytohabitans houttuyneae TaxID=1076126 RepID=A0A6V8KTY4_9ACTN)

HSP 1 Score: 96.7 bits (239), Expect = 3.230e-22
Identity = 59/123 (47.97%), Postives = 78/123 (63.41%), Query Frame = 0
Query:    7 GGSIIVNSSVMSQRAQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWG---GMPPETLQGFCKDLQ-LFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGLK 125
            GGS++V  S ++      F TA  YA SK+ V+ LVR  A EGA HG+RVNAV PG+VDTP+ G   G PP  L+    +L  L GRA TPDE+A +V++L   DS  VTG++  +DG W L+
Sbjct:  109 GGSVVVVGSALAHTLDDDFLTAA-YAVSKSGVETLVRLAAYEGARHGVRVNAVAPGLVDTPMAGRALGDPP--LRARLPELMPLGGRACTPDEVAAAVVWLLGPDSARVTGAVVPVDGGWTLR 228          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: Q5NW77_AROAE (Short-chain alcohol dehydrogenase n=1 Tax=Aromatoleum aromaticum (strain EbN1) TaxID=76114 RepID=Q5NW77_AROAE)

HSP 1 Score: 94.4 bits (233), Expect = 3.680e-21
Identity = 54/119 (45.38%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    5 KDGGSIIVNSSVMSQRAQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWGGMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWG 123
            K+GG  IVN  V S  A    +    Y+ASK  V  L RY A+E A+  I+VNAV+PGI+ TP+ G   PE  + F  D    GR   P+EIA  VL+LASD++  +TG  H++DG WG
Sbjct:  130 KNGGGKIVN--VASLAAHVGLTNLAAYSASKGAVVALTRYAAMEYAKDNIQVNAVSPGIIQTPILGDTTPEMTKLFSADTPA-GRLGRPEEIANMVLFLASDEADFITGITHIVDGGWG 245          
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Match: A0A835YRJ1_9STRA (Short-chain dehydrogenase/reductase SDR n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRJ1_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 1.690e-20
Identity = 55/128 (42.97%), Postives = 78/128 (60.94%), Query Frame = 0
Query:    2 ALNKDGG--SIIVNSSVMSQR--AQTAFSTAGVYAASKANVDMLVRYGAIEGAEHGIRVNAVNPGIVDTPLWGGMPPETLQGFCKDLQLFGRATTPDEIARSVLYLASDDSTMVTGSMHVMDGRWGLK 125
            A+ K GG  S+++NSS       A   F + G YA++KA  D+L++Y AIE  +HG RVN++ PG+V T L G  P +      K + L  RA  P+EIAR V +LASDD++ VTG++   DG + LK
Sbjct:  128 AIEKSGGKGSVVINSSCAGGNVTAFPVFRSNGPYASTKAAADILMKYAAIEAIDHGTRVNSIAPGVVATGL-GDFPEDAFDEMGKTVHLMPRAGRPEEIARCVCFLASDDASFVTGTVLYADGGFSLK 254          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1195.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS1_ECTSI1.630e-3253.72Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A835ZCI5_9STRA1.040e-3051.22Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
D8LQS3_ECTSI1.520e-2951.24Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
UPI001994D12B6.540e-2447.90SDR family oxidoreductase n=1 Tax=Deltaproteobacte... [more]
A0A835ZCX6_9STRA6.010e-2346.46Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A836CPZ3_9STRA6.040e-2344.27Short-chain dehydrogenase/reductase SDR n=2 Tax=Tr... [more]
A0A835ZEC4_9STRA6.360e-2348.41Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]
A0A6V8KTY4_9ACTN3.230e-2247.97Uncharacterized protein n=1 Tax=Phytohabitans hout... [more]
Q5NW77_AROAE3.680e-2145.38Short-chain alcohol dehydrogenase n=1 Tax=Aromatol... [more]
A0A835YRJ1_9STRA1.690e-2042.97Short-chain dehydrogenase/reductase SDR n=1 Tax=Tr... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 2..18
score: 31.92
coord: 31..50
score: 38.02
coord: 52..69
score: 47.6
coord: 86..106
score: 36.77
NoneNo IPR availableGENE3D3.40.50.720coord: 1..125
e-value: 8.5E-32
score: 112.4
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 4..120
e-value: 2.1E-29
score: 102.8
NoneNo IPR availablePIRSRPIRSR000095-1PIRSR000095-1coord: 5..68
e-value: 4.6E-4
score: 17.3
NoneNo IPR availablePIRSRPIRSR629511-1PIRSR629511-1coord: 5..120
e-value: 5.0E-10
score: 36.7
NoneNo IPR availablePIRSRPIRSR617711-1PIRSR617711-1coord: 28..124
e-value: 0.0022
score: 15.0
NoneNo IPR availablePIRSRPIRSR617711-2PIRSR617711-2coord: 28..124
e-value: 0.0022
score: 15.0
NoneNo IPR availablePIRSRPIRSR000094-3PIRSR000094-3coord: 5..122
e-value: 1.0E-11
score: 42.3
NoneNo IPR availablePIRSRPIRSR629511-2PIRSR629511-2coord: 5..120
e-value: 5.0E-10
score: 36.7
NoneNo IPR availablePANTHERPTHR24321DEHYDROGENASES, SHORT CHAINcoord: 5..124
NoneNo IPR availableCDDcd05233SDR_ccoord: 2..114
e-value: 7.78506E-32
score: 110.451
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 4..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1195contigA-nodosum_M_contig1195:210302..211457 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1195.10.1mRNA_A-nodosum_M_contig1195.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1195 210067..211516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1195.10.1 ID=prot_A-nodosum_M_contig1195.10.1|Name=mRNA_A-nodosum_M_contig1195.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp
MALNKDGGSIIVNSSVMSQRAQTAFSTAGVYAASKANVDMLVRYGAIEGA
EHGIRVNAVNPGIVDTPLWGGMPPETLQGFCKDLQLFGRATTPDEIARSV
LYLASDDSTMVTGSMHVMDGRWGLKA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf