prot_A-nodosum_M_contig11912.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11912.1.1
Unique Nameprot_A-nodosum_M_contig11912.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length127
Homology
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KZE6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZE6_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 1.050e-19
Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G  GVG+A++++I  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:   34 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGGHGVGIAIKEAIWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRSTAGGDVNAKDSFWTALDAAI 157          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5JVN7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVN7_9PHAE)

HSP 1 Score: 93.6 bits (231), Expect = 1.080e-19
Identity = 54/127 (42.52%), Postives = 80/127 (62.99%), Query Frame = 0
Query:   10 EVLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            +V+ +    GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G+ GVG+A+++++      E R  E IS RL+KV L++ GR   VTFVVGYA  +T+ +        K++FWTAL+ A+
Sbjct:  179 KVMQISSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGEQGVGIAIKEAMWETVGEEGRKVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRITAGGDVNAKDSFWTALDAAI 303          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KDU4_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDU4_9PHAE)

HSP 1 Score: 92.8 bits (229), Expect = 1.990e-19
Identity = 54/125 (43.20%), Postives = 77/125 (61.60%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSI---SRAEARPPEFISDRLLKVTLELCGRARAVTFVVGYAQQTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR GQ ++   GYVV  SG   G  + K+G  GVG+A+++++   +  E R  E IS RL+KV L++ GR   VTFVVGYA +T+          K++ WTAL+ A+
Sbjct:  148 VMQICSTNGCDVIGLQETRREGQGSIAHDGYVVIWSGARAGTKD-KRGVHGVGIAIKEAMWDSAGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPRTVRTTAGGDVNAKDSLWTALDAAI 270          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KBZ6_9PHAE (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBZ6_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 3.380e-19
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAI 126          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KAA3_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAA3_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.820e-19
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYA-QQTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR+GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:    3 VMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPSETVRTTAGGDVNAKDSFWTALDAAI 126          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5JMB4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMB4_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 6.710e-19
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR+GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:  111 VMQICSATGCDVIGLQETRRAGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAI 234          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KEC1_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEC1_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 7.060e-19
Identity = 54/126 (42.86%), Postives = 79/126 (62.70%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNLFR-----KKNTFWTALERAV 127
            V+ ++   GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:    3 VMQIFSATGCDMIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESGGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGGVDAKDSFWTALDAAI 126          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5KQ63_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ63_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 7.520e-19
Identity = 55/126 (43.65%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR GQ ++   GYV   SG   G  +GK G  GVG+A+++++ ++   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVFIWSGARAGT-KGKWGVHGVGIAIKEAMWQSVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAI 126          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5L7A7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A7_9PHAE)

HSP 1 Score: 90.9 bits (224), Expect = 9.450e-19
Identity = 54/126 (42.86%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            V+ +    GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:    3 VMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAI 126          
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Match: A0A6H5JGX2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGX2_9PHAE)

HSP 1 Score: 90.5 bits (223), Expect = 1.290e-18
Identity = 53/126 (42.06%), Postives = 78/126 (61.90%), Query Frame = 0
Query:   11 VLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESGGDGEGKKGQGGVGLAVRKSISRA---EARPPEFISDRLLKVTLELCGRARAVTFVVGYAQ-QTLNL-----FRKKNTFWTALERAV 127
            ++ +    GCD+IGLQETRR GQ ++   GYV+  SG   G  + K+G  GVG+A+++++  +   E R  E IS RL+KV L++ GR   VTFVVGYA  +T+          K++FWTAL+ A+
Sbjct:   84 IMQICSATGCDVIGLQETRREGQGSIAHDGYVIIWSGARAGTKD-KRGVHGVGIAIKEAMWESVGEEGRTVECISPRLMKVRLQI-GRTCGVTFVVGYAPTETVRTTAGGDVNAKDSFWTALDAAI 207          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11912.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZE6_9PHAE1.050e-1943.65Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5JVN7_9PHAE1.080e-1942.52Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KDU4_9PHAE1.990e-1943.20Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KBZ6_9PHAE3.380e-1942.86Endo/exonuclease/phosphatase domain-containing pro... [more]
A0A6H5KAA3_9PHAE4.820e-1942.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JMB4_9PHAE6.710e-1942.86Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KEC1_9PHAE7.060e-1942.86Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KQ63_9PHAE7.520e-1943.65Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5L7A7_9PHAE9.450e-1942.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGX2_9PHAE1.290e-1842.06Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005135Endonuclease/exonuclease/phosphatasePFAMPF03372Exo_endo_phoscoord: 7..77
e-value: 6.4E-7
score: 29.2
IPR036691Endonuclease/exonuclease/phosphatase superfamilyGENE3D3.60.10.10Endonuclease/exonuclease/phosphatasecoord: 1..127
e-value: 2.1E-8
score: 36.1
IPR036691Endonuclease/exonuclease/phosphatase superfamilySUPERFAMILY56219DNase I-likecoord: 4..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11912contigA-nodosum_M_contig11912:9067..9447 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11912.1.1mRNA_A-nodosum_M_contig11912.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11912 9067..9447 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11912.1.1 ID=prot_A-nodosum_M_contig11912.1.1|Name=mRNA_A-nodosum_M_contig11912.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp
MEARRGRAAEVLDVYQEMGCDIIGLQETRRSGQSALLQAGYVVYCSGESG
GDGEGKKGQGGVGLAVRKSISRAEARPPEFISDRLLKVTLELCGRARAVT
FVVGYAQQTLNLFRKKNTFWTALERAV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005135Endo/exonuclease/phosphatase
IPR036691Endo/exonu/phosph_ase_sf