prot_A-nodosum_M_contig1190.9.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1190.9.1
Unique Nameprot_A-nodosum_M_contig1190.9.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length1567
Homology
BLAST of mRNA_A-nodosum_M_contig1190.9.1 vs. uniprot
Match: A0A6H5L195_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L195_9PHAE)

HSP 1 Score: 916 bits (2368), Expect = 6.580e-307
Identity = 632/1302 (48.54%), Postives = 739/1302 (56.76%), Query Frame = 0
Query:  477 RHLSREARLFLLESLAVATGRDLG-VVFESA--GISLTFSGIPPF----------------------------TQADRAWFETLRANARQAWGG-----VLNGDLDSPPQ---PSSVCGPNTGGSGWVPRGARAVGRGRVEVDGEGALVPEFDSQTAMRMAEELFSEMVAGKKGCRVSSRAQASLVKANFRSALARARGPAPPAAVSDLADRTPTAFEENDLELALSVGQTAADRFKLKKKNTTKSANKTSAKKLKAPPSGGKSPNVTEV--------------------------------------------SKASSSNRTTSVVTKDKIDGDKGEDTRVKDAATAVE-----------------------------------------TSLKKAGREGGDGVPVTSEDGDG-FWPASTLLQECLACNYTAGAEIVLERMAKEGHWARTSTYNTLLWHFRQERDAKAALDVLQSLRESETVTPDKLSYTLAIQACVWSGSCMDEALTVVEEAERAGL----SFGSKNLLDARLVLVHAVGGDVMEGLKEMASRGVSPDESTLLGVIEACSERGDAKGAMDILKMMRGAARH-----------------GALSCPRPSYRSYLAALTACSRAPLPVSINDGAMPPDARAALVTKEARGDGRASKEILGMMWDDEAARVAEK--------------------------SVAVPGTWSPVLREALSLGPSHVTMPAVPDASCYQLAMECCVAVGRNDEALSLLTEMESKGLRPNEAALRALIKGFVAEGETKARGEAVGMATAERAAAAAKIRWTSVENALGVFEELAERFCPPSRASFESAIDACMYHADGLQCAADLITRMKAVGHDLGSDHYNVLIRGFGDARNLGAALNVFQEMREGVAVGGPGGGRRDRTLGWEVEEDMFAALLGACTRSGKADTVSEAIDFLRLNGINPPSEILSYLQNEEFESELYDQIFGERDRKAGKARE-KSRARKYGTHALAAQVF-GSALAESRRGNEDDESDIIYDDGEPPTHRGGLSSRATLKGLRIDSGEAA---RQTTKQTFAKVAQGCMKRLEEARIKKEAADEDE-AWSASSRNPVGWVGIFTEAFTHAERKEAALKRKAGEARSRERRAKXXENERRAL---------------------TASTTAVGNKLGGDAGAKTAPGTGGGKRAVGASVATPGGRRRRGA-----------------------GKEAAVARPGRPILVRWGGSGAG-QGSMTEEESPALEAVVAGLRRKGRDVSRGRGRQRVSATSVTS 1555
            R L+REARL LLE+LAVATGR LG VVFE+A  G  LT + +                                Q D AWFETLRA AR+AW G         DL++PP+    +   G   GG GWVP GARA G GR EVDGEGALVP FD++ A RMA+ELFSEM AGK+  RVSSRAQASLV+A FRS LA +RG APPA++S+LADRT T+F+E DLELAL  GQ  AD+ K+K   TT ++                                                                          R ++ V K+K  G +G  +                                                   TS +K  +      P +     G FW ASTLLQE LACNYTAGAEIVL  M+KEG WA TSTYNTLLW+FRQERDAK AL +LQSLRESE V PD+ SYTLAIQACVWSGS ++EA  +VEEA+ A      SF SK+LLDARL LV AVGGDV+ GL+EM+ RGV+ DEST+LGVIEAC++RGDA GA+DIL+MMRGA                        CPRPSYRSYLAA                     +   +     RGD RA+KE+L MMW+DEAAR                               +A  GTWS  L+EAL LGPSHVTMPAVPDA+CYQLAMECCV+ GRNDEAL+LL+EME +GL PNEAALRALI+GF  EG     G     A  ERA    + RW  VENALGVFEELAERF PPSRASFE AIDAC+ H DGLQ A DLI+RMK+VGHDL +DHYNVLIRGFGDARNLGAALNVFQ MREGVAVGGPGGG R RTLGWEVEEDMFAAL+GACTRSG+A+ VSEAI FLR+NG+NPPSEILSYLQNEEFESELYD+IFGE+DR AGKA+E +SR RKYGTHALAA +  GS                  D GE            +    R+    AA   +   +QTFA+ A+G ++R EE R+K E  +ED  A+SA+ R+PVGWVG FTE FTHAERKE ALKR+AGEARSRERR K  E ER A                      +A T A+   +         P  G    A            R GA                       G      R  +P+LV+ GG G+G QGS++EE SP LEAVVAGLRRKG + S+GR R+    ++V S
Sbjct:   16 RGLTREARLRLLEALAVATGRALGNVVFETAAAGRGLTLAPLSKIKQXXXXXXXXXXXXXXXXXXXASATAIVAQPDPAWFETLRATARRAWSGGGGCDADGNDLEAPPRLVPEAGGFGCGNGGGGWVPVGARAAGTGRAEVDGEGALVPAFDARIAARMAQELFSEMAAGKEAGRVSSRAQASLVRAKFRSTLALSRGAAPPASLSELADRTLTSFDETDLELALQAGQLTADQLKIKNPKTTPASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNVRGKERGSADVGKNKTKGREGPSSPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATSGQKEEKVERKAGPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLHTMSKEGLWATTSTYNTLLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAQAAATGGDYSFASKDLLDARLALVQAVGGDVLHGLREMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXXXXATAVCPRPSYRSYLAAXXXXXXXXXXXXXXXXXXXXXSGDGV-----RGDWRAAKEVLRMMWEDEAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGGLAWCGTWSTELQEALRLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALALLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAAERERA----ERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIRGSGGGMVSXXXXXXXXXXXEDSGEVXXXXX-XXXXXSASARRVGGNGAAGSIKNREEQTFAEAARGILRRAEERRMKVERVEEDGGAFSANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXSGSAKTVAIPRSI-------DKPKGGFDAAAESXXXXXXXXXXRVGALXXXXXXXXXXXXXXXXXXXXXXGSRLEPRR--KPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSN-SKGRSRRGSGLSAVPS 1297          
BLAST of mRNA_A-nodosum_M_contig1190.9.1 vs. uniprot
Match: D8LKT0_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT0_ECTSI)

HSP 1 Score: 843 bits (2179), Expect = 3.230e-281
Identity = 568/1136 (50.00%), Postives = 660/1136 (58.10%), Query Frame = 0
Query:  597 MAEELFSEMVAGKKG-------------CRVSSRAQASLVKANFRSALARARGPAPPAAVSDLADRTPTAFEENDLELALSVGQTAADRFKLKKKNTTKSANKTSAKKLKAPPSGGKSPNVTEV---------------------------------------------------SKASSSNRTTSVVTKDKIDGDKGEDT----------------------RVKDAATAVETSLKKAGREGGDGVPVTSEDGDG-------------------FWPASTLLQECLACNYTAGAEIVLERMAKEGHWARTSTYNTLLWHFRQERDAKAALDVLQSLRESETVTPDKLSYTLAIQACVWSGSCMDEALTVVEEAERAGL----SFGSKNLLDARLVLVHAVGGDVMEGLKEMASRGVSPDESTLLGVIEACSERGDAKGAMDILKMMRGAARHGALS--------------CPRPSYRSYLAALTACSRAPLPVSINDGAMPPDARAALVTKEARGDGRASKEILGMMWDDEAARVAEKSVAVPGTWSPVLREALSLGPSHVTMPAVPDASCYQLAMECCVAVGRNDEALSLLTEMESKGLRPNEAALRALIKGFVAEGETKARGEAVGMATAERAAAAAKIRWTSVENALGVFEELAERFCPPSRASFESAIDACMYHADGLQCAADLITRMKAVGHDLGSDHYNVLIRGFGDARNLGAALNVFQEMREGVAVGGPGGGRRDRTLGWEVEEDMFAALLGACTRSGKADTVSEAIDFLRLNGINPPSEILSYLQNEEFESELYDQIFGERDRKAGKARE-KSRARKYGTHALAAQVFGSA---LAESRRGNEDDESDIIYDDGEPPTHRGGLSSRATLKGLRIDSGEAARQTTKQTFAKVAQGCMKRLEEARIKKEAADEDE-AWSASSRNPVGWVGIFTEAFTHAERKEAALKRKAGEARSRERRAKXXENERRALT------------------------ASTTAVGNKL-----GGDAGAKTAPGTGGGKRA-VGASVA----------TPGGRRRRGAGKEAAVARPGRPILVRWGGSGAG-QGSMTEEESPALEAVVAGLRRKGRDVSRGRGRQRVSATSVTSASSKKKKE 1563
            MA+ELFSEM AGK+               RVSSRAQASLV+A FRS LAR+RG APPA++SDLADRT T+F+E DLELAL  GQ  AD+ K+K   TT ++  T                                                                         A    R ++ V K+K  G +G+ +                                 S K+  + GG G   T+  G                     FW ASTLLQE LACNYTAGAEIVL+ M+ EG WA TSTYNT LW+FRQERDAK AL +LQSLRESE V PD+ SYTLAIQACVWSGS ++EA  +VEEAE        SF SK+LLDARLVLV AVGGDV++GLKEM+ RGV+ DEST+LGVIEAC++RGDA GA+DIL+MMRGA                     CPRPSYRSYLAAL                   D          RGD RA+KE+L MMW+DEAAR A+  VAVPGTWS  L+EALSLGPSHVTMPAVPDA+CYQLAMECCV+ GRNDEAL LL+EME +GL PNEAALRALI+GF  EG     G     A  ERA    + RW  VENALGVFEELAERF PPSRASFE AIDAC+ H DGLQ A DLI+RMK+VGHDL +DHYNVLIRGFGDARNLGAALNVFQ MREGVAVGGPGGG R RTLGWEVEEDMFAAL+GACTRSG+A+ VSEAI FLR+NG+NPPSEILSYLQNEEFESELYD+IFGE+DR AGKA+E +SR RKYGTHALAA + G +                                                       TFA+  +  ++R EE R + E  +ED  A+ A+ R+PVGWVG FTE FTHAERKE ALKR+AGEARSRERR K  E ER A                          A T A+   +     G DA A++A G G  +R  VGA  A                    G      R  +P+LV+ GG G+G QGS++EE SP LEAVVAGLRRKG + S+GR R+    ++V S    K+KE
Sbjct:    1 MAQELFSEMAAGKEAGSRQPTSPRRFAPVRVSSRAQASLVRAKFRSTLARSRGAAPPASLSDLADRTLTSFDETDLELALQAGQLTADQLKIKNPTTTPASASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNARGKERGSADVGKNKTKGGRGQPSPAAAKGGXXXXXXXXXXXXXXXXTXXXXXXXXASGKEKLQRGGSGDAETATGGQKKEKVERKAAPASRAGEMGRFWAASTLLQESLACNYTAGAEIVLDTMSNEGLWATTSTYNTFLWYFRQERDAKGALSMLQSLRESENVKPDQSSYTLAIQACVWSGSRVEEAWAIVEEAEAVATGGDSSFASKDLLDARLVLVQAVGGDVLQGLKEMSERGVTADESTMLGVIEACAQRGDAAGALDILQMMRGAXXXXXXXXXXXXXXXXXTTAVCPRPSYRSYLAALXXXXXXXXXXXXXXXXXSGDG--------VRGDWRAAKEVLRMMWEDEAARAAKGDVAVPGTWSTELQEALSLGPSHVTMPAVPDAACYQLAMECCVSGGRNDEALGLLSEMEGRGLSPNEAALRALIRGFALEGVVADGGGGGPAADRERA----ERRWRGVENALGVFEELAERFDPPSRASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTRSGEAENVSEAIGFLRMNGVNPPSEILSYLQNEEFESELYDEIFGEKDRLAGKAKEQRSRGRKYGTHALAAHLIGGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFAEAVRDILRRAEERRKRVERVEEDGGAFPANPRHPVGWVGTFTETFTHAERKEEALKRRAGEARSRERRLKRREAERLAAXXXXXXXXXXXXXXXXXXXXXXXXXAKTVAIPKSIDKPKGGFDAAAESAGGDGARRRGRVGALSAHXXXXXXXXXXXXXXXXXXXGSRLEPRR--KPVLVKTGGGGSGVQGSLSEEPSPVLEAVVAGLRRKGSN-SKGRSRRGSGLSAVPSQPMVKRKE 1121          
BLAST of mRNA_A-nodosum_M_contig1190.9.1 vs. uniprot
Match: A0A6H5KDS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDS3_9PHAE)

HSP 1 Score: 176 bits (446), Expect = 7.930e-48
Identity = 85/99 (85.86%), Postives = 90/99 (90.91%), Query Frame = 0
Query: 1139 RASFESAIDACMYHADGLQCAADLITRMKAVGHDLGSDHYNVLIRGFGDARNLGAALNVFQEMREGVAVGGPGGGRRDRTLGWEVEEDMFAALLGACTR 1237
            RASFE AIDAC+ H DGLQ A DLI+RMK+VGHDL +DHYNVLIRGFGDARNLGAALNVFQ MREGVAVGGPGGG R RTLGWEVEEDMFAAL+GACTR
Sbjct:    9 RASFEQAIDACVSHPDGLQHAGDLISRMKSVGHDLQADHYNVLIRGFGDARNLGAALNVFQTMREGVAVGGPGGGARSRTLGWEVEEDMFAALVGACTR 107          
BLAST of mRNA_A-nodosum_M_contig1190.9.1 vs. uniprot
Match: A0A6H5L1W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W2_9PHAE)

HSP 1 Score: 157 bits (398), Expect = 1.260e-36
Identity = 102/173 (58.96%), Postives = 121/173 (69.94%), Query Frame = 0
Query:  316 ASTVAAEEFAELARRCLGSGLPDIALEA---HSLYVRAAKAGLDP---AVITTGPLPTT-IAAENWASFNSRSRTEAEKKLLLCAARSHIAMGGVLDGLALIDDAARLGDDAA------REGGRWGGDGDGGAGAAQLLSDDEASELVEELCVTGGQVGLRAALRLRERLAEQ 475
            A+ VAAEEFAELA RCLGS LP+IALEA   HSLYVRA  +GL P   A++   PL T  +  ++    + R R +AE  LL+ AAR+HIAMGGVLDG+ALIDDA  +G D A      R  GRWGGDG  GAG A+L  D +AS + EELCV+GG  GLRAALRLRERLAE+
Sbjct:  369 AAAVAAEEFAELAARCLGSALPEIALEASVAHSLYVRAEASGLQPRTTALLPEYPLTTDDVDTQDDDDGHWRRRWDAEVSLLVTAARAHIAMGGVLDGIALIDDATAIGGDGASAAAALRAAGRWGGDGVAGAGLARL-GDGDASTVAEELCVSGGDTGLRAALRLRERLAEE 540          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1190.9.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5L195_9PHAE6.580e-30748.54Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LKT0_ECTSI3.230e-28150.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KDS3_9PHAE7.930e-4885.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L1W2_9PHAE1.260e-3658.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 1178..1203
e-value: 1.8E-4
score: 19.5
coord: 1045..1078
e-value: 0.0026
score: 15.8
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 1046..1074
e-value: 0.15
score: 12.4
coord: 1177..1203
e-value: 0.0016
score: 18.5
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 1042..1076
score: 10.676364
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1033..1103
e-value: 6.8E-8
score: 34.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 1104..1323
e-value: 2.0E-21
score: 78.8
coord: 881..968
e-value: 3.0E-7
score: 32.2
coord: 769..877
e-value: 3.2E-10
score: 42.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 108..149
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 194..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 721..738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1421..1566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..209
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 701..720
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 279..310
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 240..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1545..1566
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 676..738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1421..1444
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1314..1344
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 891..1266
coord: 596..936

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1190contigA-nodosum_M_contig1190:111959..147261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1190.9.1mRNA_A-nodosum_M_contig1190.9.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1190 111399..147456 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1190.9.1 ID=prot_A-nodosum_M_contig1190.9.1|Name=mRNA_A-nodosum_M_contig1190.9.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=1567bp
MEGGGQHFGAERWNSSAHSIIRLAFCAPSCVAVIVMASVSRFTGKTTTVE
GMRMNPPRQGWQGLASGAPSSSLSSFFADRNIVCGGRETPPQVAREGTRT
LCMRSRGRRRTGRSELYDSIPMVREQRESSRRGQERAALAKKQQQEDQQQ
QRREASLSATIIAVSASATRSDSADVDDIQKKILHPRPRGQFVVEKSQPQ
SPSDSSTVSVALELEEETADVGTTGACLPRDFKGADGKGATKRRRGRRSR
KRWGRGKPLNRPEAVEMLCGAVARMRAAQVSSSSSSGPHGRGGRTAAVGV
GVEDGGEEDEATEKDASTVAAEEFAELARRCLGSGLPDIALEAHSLYVRA
AKAGLDPAVITTGPLPTTIAAENWASFNSRSRTEAEKKLLLCAARSHIAM
GGVLDGLALIDDAARLGDDAAREGGRWGGDGDGGAGAAQLLSDDEASELV
EELCVTGGQVGLRAALRLRERLAEQGRHLSREARLFLLESLAVATGRDLG
VVFESAGISLTFSGIPPFTQADRAWFETLRANARQAWGGVLNGDLDSPPQ
PSSVCGPNTGGSGWVPRGARAVGRGRVEVDGEGALVPEFDSQTAMRMAEE
LFSEMVAGKKGCRVSSRAQASLVKANFRSALARARGPAPPAAVSDLADRT
PTAFEENDLELALSVGQTAADRFKLKKKNTTKSANKTSAKKLKAPPSGGK
SPNVTEVSKASSSNRTTSVVTKDKIDGDKGEDTRVKDAATAVETSLKKAG
REGGDGVPVTSEDGDGFWPASTLLQECLACNYTAGAEIVLERMAKEGHWA
RTSTYNTLLWHFRQERDAKAALDVLQSLRESETVTPDKLSYTLAIQACVW
SGSCMDEALTVVEEAERAGLSFGSKNLLDARLVLVHAVGGDVMEGLKEMA
SRGVSPDESTLLGVIEACSERGDAKGAMDILKMMRGAARHGALSCPRPSY
RSYLAALTACSRAPLPVSINDGAMPPDARAALVTKEARGDGRASKEILGM
MWDDEAARVAEKSVAVPGTWSPVLREALSLGPSHVTMPAVPDASCYQLAM
ECCVAVGRNDEALSLLTEMESKGLRPNEAALRALIKGFVAEGETKARGEA
VGMATAERAAAAAKIRWTSVENALGVFEELAERFCPPSRASFESAIDACM
YHADGLQCAADLITRMKAVGHDLGSDHYNVLIRGFGDARNLGAALNVFQE
MREGVAVGGPGGGRRDRTLGWEVEEDMFAALLGACTRSGKADTVSEAIDF
LRLNGINPPSEILSYLQNEEFESELYDQIFGERDRKAGKAREKSRARKYG
THALAAQVFGSALAESRRGNEDDESDIIYDDGEPPTHRGGLSSRATLKGL
RIDSGEAARQTTKQTFAKVAQGCMKRLEEARIKKEAADEDEAWSASSRNP
VGWVGIFTEAFTHAERKEAALKRKAGEARSRERRAKRRENERRALTASTT
AVGNKLGGDAGAKTAPGTGGGKRAVGASVATPGGRRRRGAGKEAAVARPG
RPILVRWGGSGAGQGSMTEEESPALEAVVAGLRRKGRDVSRGRGRQRVSA
TSVTSASSKKKKEGSA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf