prot_A-nodosum_M_contig1190.20.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1190.20.1
Unique Nameprot_A-nodosum_M_contig1190.20.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length376
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1190.20.1 vs. uniprot
Match: A0A6H5LJ65_9PHAE (DUF202 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LJ65_9PHAE)

HSP 1 Score: 186 bits (473), Expect = 2.230e-52
Identity = 141/379 (37.20%), Postives = 177/379 (46.70%), Query Frame = 0 
Query:    1 MARRSVTIVASDGRREGVSWYEGATEAAVLRCVRLALGLEVKGTAHLLWKSGDIVDFDKPITDGVTLYLDTAVAPYDDYYSYGGVGTAGXXXXXXXXXXXXXXXXTSISGGSHSVGGLAHRRSSARVKIHPEYSAGGYGTED-------VGDQRAWGSVSDLRTGLPPPTVARGGLIQRLLRLWCSDDSSDAERXXXXXXXXXXXXXXXPSQQLHHEENAYNAIVRGSVAGDKRRYLLGAKVSVSEDEKCDPEQQRRGILKLKRILAHLANERTLLAWVRVMAKLFSAGSLSMTLAA-ATEGANTVILVVLGVMYFVLCPYVVFIGSSRFHQVKAVMQGTVHETYSHFAGKDLQGVNMLMSLMAALTMGVMIVQLLSNI 371
            MARRSVTIVASDGRREG+SWY+GATEAAVLRC  LALGL +K  AHLL +SGDIVD   PITDG TL+LDT                                     +G  ++ GG  H  SS                         +   R  GSVS   +G        GG  ++    +     SD E                 S  L                                      EQQR  ILKLKRI AHLANERTLLAWVR + K+F+AG L ++LA        TV  V  G++YF + PYVVF+G+ RFHQ   VM G+V++TYS F+G  L+G+  LM  +A +T+ +M  QL +++
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLRQSGDIVDLGTPITDGATLHLDTV--------------------------RELALPSQEAAGDVYASGGHDHGESSXXXXXXXXXXXXXXXXXXXXXXXXXLATTRCGGSVSVTVSG-------GGGDCRQRPSTFLERGDSDEE---LERRPLLRTGRVPSSTSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQRLAILKLKRINAHLANERTLLAWVRAVGKMFTAGVLCLSLAGDGYSPTYTVCFVGTGIVYFAMGPYVVFVGAKRFHQAAQVMNGSVYDTYSFFSGSHLRGLTYLMMTLAVVTVALMATQLSADL 343
[Close]
BLAST of mRNA_A-nodosum_M_contig1190.20.1 vs. uniprot
Match: D8LKT5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT5_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 4.350e-29
Identity = 57/71 (80.28%), Postives = 62/71 (87.32%), Query Frame = 0 
Query:    1 MARRSVTIVASDGRREGVSWYEGATEAAVLRCVRLALGLEVKGTAHLLWKSGDIVDFDKPITDGVTLYLDT 71
            MARRSVTIVASDGRREG+SWY+GATEAAVLRC  LALGL +K  AHLLW+SGDIVD   PITDG TL+LDT
Sbjct:    1 MARRSVTIVASDGRREGISWYDGATEAAVLRCALLALGLPLKSAAHLLWQSGDIVDLGTPITDGATLHLDT 71
[Close]
BLAST of mRNA_A-nodosum_M_contig1190.20.1 vs. uniprot
Match: D8LKT6_ECTSI (DUF202 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKT6_ECTSI)

HSP 1 Score: 120 bits (301), Expect = 8.020e-29
Identity = 68/131 (51.91%), Postives = 94/131 (71.76%), Query Frame = 0 
Query:  245 PEQQRRGILKLKRILAHLANERTLLAWVRVMAKLFSAGSLSMTLAAATEGANT---VILVVLGVMYFVLCPYVVFIGSSRFHQVKAVMQGTVHETYSHFAGKDLQGVNMLMSLMAALTMGVMIVQLLSNIY 372
            PEQQR  ILKLKRI AHLANERTLLAWVR + K+F+AG L ++L  A +G +    V  V +G++YF + PYVVF+G+ RFHQ   VM+G+VH+TYS F+G   +G+  LM  +A +T+ +M  QL +++Y
Sbjct:   70 PEQQRLAILKLKRINAHLANERTLLAWVRAVGKMFTAGVLCLSL--ADDGYSPTYRVCFVGMGMVYFAMGPYVVFVGAKRFHQAAQVMKGSVHDTYSFFSGSHQRGLTYLMMTLAVVTVALMATQLSADLY 198
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1190.20.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5LJ65_9PHAE2.230e-5237.20DUF202 domain-containing protein n=1 Tax=Ectocarpu... [more]
D8LKT5_ECTSI4.350e-2980.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LKT6_ECTSI8.020e-2951.91DUF202 domain-containing protein n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003807Domain of unknown function DUF202PFAMPF02656DUF202coord: 261..325
e-value: 3.4E-7
score: 30.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1190contigA-nodosum_M_contig1190:189637..198766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1190.20.1mRNA_A-nodosum_M_contig1190.20.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1190 189529..199192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1190.20.1 ID=prot_A-nodosum_M_contig1190.20.1|Name=mRNA_A-nodosum_M_contig1190.20.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=376bp
MARRSVTIVASDGRREGVSWYEGATEAAVLRCVRLALGLEVKGTAHLLWK
SGDIVDFDKPITDGVTLYLDTAVAPYDDYYSYGGVGTAGSGSGSGAGGSG
SGNGNTSISGGSHSVGGLAHRRSSARVKIHPEYSAGGYGTEDVGDQRAWG
SVSDLRTGLPPPTVARGGLIQRLLRLWCSDDSSDAERKSDDEQRPLLLAR
SSPSQQLHHEENAYNAIVRGSVAGDKRRYLLGAKVSVSEDEKCDPEQQRR
GILKLKRILAHLANERTLLAWVRVMAKLFSAGSLSMTLAAATEGANTVIL
VVLGVMYFVLCPYVVFIGSSRFHQVKAVMQGTVHETYSHFAGKDLQGVNM
LMSLMAALTMGVMIVQLLSNIYWSR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003807DUF202