prot_A-nodosum_M_contig119.72.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig119.72.1
Unique Nameprot_A-nodosum_M_contig119.72.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length345
Homology
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BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5KJZ9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJZ9_9PHAE)

HSP 1 Score: 318 bits (815), Expect = 2.260e-101
Identity = 140/225 (62.22%), Postives = 173/225 (76.89%), Query Frame = 0 
Query:  114 AWCLRNAMHQTFSGVILKDDDEVFPKGKWNGDQWSYHDRITNGFHVLATIGGDTYGFWDLTVVRITGKTIFKAGYKGDTCLFYTEISEPGDH-IDDEAACRGSAWAGSVSLKGEVEYGYGTKAERWSGEISQDHEAGNWSLPPGTESLIDFQRSPTDEGEVRLLYHRVVAPTKGIFGWAGGESLTFDLVFTGGESMAVSDILNLVKVPIACETRSGEFHDEEVRG 337
            +WCL NA HQ+F GV+LK+DD V P+G+W G+ W YHD ITNGFH+  TIGGDTYGFWDL ++   G T + A YKGD CLFY E  +PG    D++  CRGSAWAGSV+LK +VE+GYG KAERW+G I  D + G   LPPGTESL+DFQR+P ++ EVRLLYHRVVAPT G+ GWAGG+SL+FDLVFT  + MA +D+L+LVKVP  CE  +GEFHD++ RG
Sbjct:  178 SWCLPNAAHQSFLGVVLKEDDGVMPQGEWEGEHWWYHDEITNGFHMAVTIGGDTYGFWDLGIIGAAGNTEYVAAYKGDRCLFYEEKVQPGSTPFDEDVTCRGSAWAGSVTLKEQVEFGYGMKAERWAGTIVDDEDTGYGGLPPGTESLVDFQRNPDNQSEVRLLYHRVVAPTNGVLGWAGGDSLSFDLVFTNLDMMAANDVLDLVKVPGICEVMAGEFHDQQARG 402
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BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: D8LI79_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI79_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 3.360e-89
Identity = 127/207 (61.35%), Postives = 157/207 (75.85%), Query Frame = 0 
Query:  138 PKGKWNGDQWSYHDRITNGFHVLATIGGDTYGFWDLTVVRITGKTIFKAGYKGDTCLFYTEISEPGDH-IDDEAACRGSAWAGSVSLKGEVEYGYGTKAERWSGEISQDHEAGNWSLPPGTESLIDFQRSPTDEGEVRLLYHRVVAPTKGIFGWAGGESLTFDLVFTGGESMAVSDILNLVKVPIACETRSGEFHDEEVRG-AGRAI 342
            P+G+W G+ W YHD ITNGFH+  TIGGDTYGFWDL ++   G T + A YKGD CLFY E  +PG    D++  CRGSAWAG+V+LK +VE+GYGTKAERW+G I  D + G   LPPGTESL+D QR+P D+ EVRLLYHRVVAPT G+ GWA G+SL+FDLVFT  + MA +D+L+LVKVP  CE  +GEFHD++ RG AG A+
Sbjct:    2 PQGEWEGEHWWYHDEITNGFHMAVTIGGDTYGFWDLGIIGAAGNTEYVAAYKGDRCLFYEEKVQPGSTPFDEDVTCRGSAWAGNVTLKEQVEFGYGTKAERWAGTIVDDEDTGYGGLPPGTESLVDLQRNPDDQSEVRLLYHRVVAPTNGVLGWASGDSLSFDLVFTNLDMMAANDVLDLVKVPSICEVMAGEFHDQQARGNAGGAV 208
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KJZ9_9PHAE2.260e-10162.22Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LI79_ECTSI3.360e-8961.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig119contigA-nodosum_M_contig119:675446..678183 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig119.72.1mRNA_A-nodosum_M_contig119.72.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig119 667180..679438 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig119.72.1 ID=prot_A-nodosum_M_contig119.72.1|Name=mRNA_A-nodosum_M_contig119.72.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=345bp
MSKMNNSYESIDSASSSTNSAPSRSCDEVEGSSKSSPAPKIKSGGDTVQD
FVKGRLAVAGLTLWAGVATAAAVLLAFSPRGDTRGIVDSAARGGGSSSAT
GTTGTSVDALHPKAWCLRNAMHQTFSGVILKDDDEVFPKGKWNGDQWSYH
DRITNGFHVLATIGGDTYGFWDLTVVRITGKTIFKAGYKGDTCLFYTEIS
EPGDHIDDEAACRGSAWAGSVSLKGEVEYGYGTKAERWSGEISQDHEAGN
WSLPPGTESLIDFQRSPTDEGEVRLLYHRVVAPTKGIFGWAGGESLTFDL
VFTGGESMAVSDILNLVKVPIACETRSGEFHDEEVRGAGRAIRK*
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