mRNA_A-nodosum_M_contig119.72.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_A-nodosum_M_contig119.72.1
Unique Name	mRNA_A-nodosum_M_contig119.72.1
Type	mRNA
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))

Homology

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5KC90_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC90_9PHAE)

HSP 1 Score: 591 bits (1523), Expect = 6.450e-178
Identity = 371/880 (42.16%), Postives = 499/880 (56.70%), Query Frame = -2

Query: 2243 LHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRD----------KL*IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSRLDYILTKQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNL----RKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWP-CR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCA-GDCSISSFVFGGGARCRSSGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKAD-KGNMDALVHLRRKRGAGGRGEATVGE---VALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4765
            L   I  V +R+++ V  DANA TG+R +G    D+K++GAYGRD           L  DN+L+L++T+F TPK GV +TFQS+N+ K + RLD+IL +Q DRR +R  +V+R  ++  +SDHNLV+  VR P R APNRR R  +  +    DL RL  D +LR    +  ++  PP        + A ++  V++S A E+ P ++  RG  GW      + E+S A ++   A++ LR    NS+L    +  +K A K   + R  A+  FF  +VR+L+ ++REGDQ GFY+HLK +++ GKR  +S  +KDE+G +LRD  L R+RW RWFH L N KSP +D +  + + QWP C     +        + R   G  + +   P      P+ +I     GD                +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+F AA+  +A T F  D K   D +    R    G RG +   +   V +A  LW MLYADDA +VS +PE L KMM +IV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  +  +  +  E+  R+  AW  +R+ +  +Y R  A  +LKIR+L+ EV++T+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED RL K ++   M GG    GG++
Sbjct:  122 LDAEIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKR--VDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVR---GMANRKAVGPDDL---PAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLERFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTICADGKVDREITSRICRAWKCYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGVGYRGGQE 988

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5K8Z5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Z5_9PHAE)

HSP 1 Score: 583 bits (1503), Expect = 6.180e-177
Identity = 366/862 (42.46%), Postives = 490/862 (56.84%), Query Frame = -2

Query: 2243 DANASTGKRGEGGGEADSKVLGAYGRD----------KL*IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSRLDYILTKQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNL----RKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWP-CR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCA-GDCSISSFVFGGGARCRSSGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKAD-KGNMDALVHLRRKRGAGGRGEATVGE---VALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4711
            DANA TG+R +G    D+K++GAYGRD           L  DN+L+L++T+F TPK GV +TFQS+N+ K + RLD+IL +Q DRR +R  +V+R  ++  +SDHNLV+  VR P R APNRR R  +  +    DL RL  D +LR    +  ++  PP        + A ++  V++S A E+ P ++  RG  GW      + E+S A ++   A++ LR    NS+L    +  +K A K   + R  A+  FF  +VR+L+ ++REGDQ GFY+HLK +++ GKR  +S  +KDE+G +LRD  L R+RW RWFH L N KSP +D +  + + QWP C     +        + R   G  + +   P      P+ +I     GD                +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+F AA+  +A T F  D K   D +    R    G RG +   +   V +A  LW MLYADDA +VS +PE L KMM +IV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  +  +  +  E+  R+  AW  +R+ +  +Y R  A  +LKIR+L+ EV++T+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED RL K ++   M GG    GG++
Sbjct:    2 DANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKR--VDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVR---GMANRKAVGPDDL---PAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTICADGKVDREITSRICRAWKCYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQE 850

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5JQH5_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQH5_9PHAE)

HSP 1 Score: 591 bits (1524), Expect = 9.800e-177
Identity = 371/880 (42.16%), Postives = 499/880 (56.70%), Query Frame = -2

Query: 2243 LHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRD----------KL*IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSRLDYILTKQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNL----RKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWP-CR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCA-GDCSISSFVFGGGARCRSSGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKAD-KGNMDALVHLRRKRGAGGRGEATVGE---VALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4765
            L   I  V +R+++ V  DANA TG+R +G    D+K++GAYGRD           L  DN+L+L++T+F TPK GV +TFQS+N+ K + RLD+IL +Q DRR +R  +V+R  ++  +SDHNLV+  VR P R APNRR R  +  +    DL RL  D +LR    +  ++  PP        + A ++  V++S A E+ P ++  RG  GW      + E+S A ++   A++ LR    NS+L    +  +K A K   + R  A+  FF  +VR+L+ ++REGDQ GFY+HLK +++ GKR  +S  +KDE+G +LRD  L R+RW RWFH L N KSP +D +  + + QWP C     +        + R   G  + +   P      P+ +I     GD                +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+F AA+  +A T F  D K   D +    R    G RG +   +   V +A  LW MLYADDA +VS +PE L KMM +IV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  +  +  +  E+  R+  AW  +R+ +  +Y R  A  +LKIR+L+ EV++T+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED RL K ++   M GG    GG++
Sbjct:  234 LDAEIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLVRNASVKR--VDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVR---GMANRKAVGPDDL---PAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTICADGKVDREITSRICRAWKCYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQE 1100

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5KDI8_9PHAE (Reverse transcriptase domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDI8_9PHAE)

HSP 1 Score: 589 bits (1518), Expect = 1.210e-174
Identity = 371/880 (42.16%), Postives = 498/880 (56.59%), Query Frame = -2

Query: 2243 LHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRD----------KL*IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSRLDYILTKQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNL----RKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWP-CR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCA-GDCSISSFVFGGGARCRSSGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKAD-KGNMDALVHLRRKRGAGGRGEATVGE---VALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4765
            L   I  V +R+++ V  DANA TG+R +G    D+K++GAYGRD           L  DN+L+L++T+F TPK GV +TFQS+N+ K + RLD+IL +Q DRR  R  +V+R  ++  +SDHNLV+  VR P R APNRR R  +  +    DL RL  D +LR    +  ++  PP        + A ++  V++S A E+ P ++  RG  GW      + E+S A ++   A++ LR    NS+L    +  +K A K   + R  A+  FF  +VR+L+ ++REGDQ GFY+HLK +++ GKR  +S  +KDE+G +LRD  L R+RW RWFH L N KSP +D +  + + QWP C     +        + R   G  + +   P      P+ +I     GD                +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+F AA+  +A T F  D K   D +    R    G RG +   +   V +A  LW MLYADDA +VS +PE L KMM +IV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  +  +  +  E+  R+  AW  +R+ +  +Y R  A  +LKIR+L+ EV++T+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED RL K ++   M GG    GG++
Sbjct:  355 LDAEIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADNRLSLINTYFRTPKGGVQHTFQSSNKGKEKHRLDFILMRQTDRRLERNASVKR--VDFKDSDHNLVHTTVRSPPRVAPNRRTRGNSGSSRIRIDLERLRKDVHLRAVFQDRALNRPPPTALSRPTGETAAELTAVVMSAAAEIAPLARSARGKGGWYTSE-AQHEISEASREIRVAQQQLRGASKNSDLETTLKAKLKAARKKRSSARWRALEKFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRPLTSQNIKDEDGKVLRDPTLTRQRWARWFHKLLNTKSPTIDLHATDRVKQWPTCVPLDDIPSLFEVEEAVR---GMANRKAVGPDDL---PAELIKLFLDGDRGFLREFHAIVVDVWQTGNVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTICADGKVDREITSRICRAWKCYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQE 1221

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5JM98_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM98_9PHAE)

HSP 1 Score: 549 bits (1415), Expect = 2.390e-163
Identity = 361/881 (40.98%), Postives = 475/881 (53.92%), Query Frame = -2

Query: 2243 LHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRD----------KL*IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSRLDYILTKQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNLRKAVKMAGKNLRNVRKAAVL----SFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWP-CR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCAGDCSISSFVFGGGARCRSSGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFK------ADKGNMDALVHLRRKRGAGGRGEATVGEVALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4765
            L   I  V +R+++ V  DANA TG+R +G    D+K++GAYGRD           L  D +L+L +T+F TPK GV +TFQS+N+ K + RLD+IL +QADRR +R V+V+R  ++  +SDHNLV   VR+P R APNRR R  +  +    DL RL  D +LR    N      PP        + A ++   ++S A E    ++  RG +GW      + E+S A +     ++ LR    NS     +K   K  R  R  A      +F   +VRKL+ + RE DQ GFY+HLK +               ++G +LR+   IR+RW RWFH L N KSP +D + A+ + +WP C     +        + R  T R   +   P         ++     D  +             +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M+ VI  FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+FFAA++ +A   F       AD   +   V    K+G   R + TV  V  A  LW MLYADDA +VS+SPE L KMM VIV V   FGL VSE KTEIMC+  KG  ES   F V AAGQ Y QT+ FVYLG  ++ +     E+  R   AW  +R+ +  +Y R  A  +LKIR+L+ EV+ET+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED+ L K ++   M GG    GG++
Sbjct:  179 LDAAIREVHSRDHLVVLMDANARTGRRRDGC--CDAKIMGAYGRDIMNNNGERLLGLAADTQLSLTNTYFRTPKGGVQHTFQSSNKGKEKYRLDFILMRQADRRFVRNVSVKR--VDFKDSDHNLVLTTVRLPPRVAPNRRARGNSGSSRIRIDLERLRKDKHLRVAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETARLARCARGQRGWYTSE-AQHEISEASKXXXAXQQQLRGASKNSAFEATLKAMLKAARKKRSIATWRALETFLEGYVRKLEKKCREVDQAGFYRHLKMI---------------DDGKVLRNPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEAVREMTNR---KAVGPDDLQAELIKLLLDA--DQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLVVIGHFHEGMRARVRPDDGQYSEWFDVGQGLRQGCNLAPLLFNLFFAAMLMVAVAEFDKDPKVTADMVKIGTQVEYTGKKGRSARRKTTV--VTDAEALWAMLYADDAAIVSRSPESLEKMMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEESP--FTVSAAGQTYKQTDRFVYLGRTISADGKADREITSRSCRAWKCYRRNSASMYDRRRANRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDSCLPKRILLGAMAGGVGYRGGQE 1030

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5LM52_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LM52_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 1.150e-151
Identity = 329/790 (41.65%), Postives = 433/790 (54.81%), Query Frame = -2

Query: 2243 KQADRRPIRCVNVRRPPLEAPESDHNLVYAKVRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNS----NLRKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWPCR*EFSLRCRS*QTPSARWRTGRLSNRTGSPSSCSRSPSTVIPPCAGDCSISSFVFGGGARCRS----------SGKMPSSW-------YFTKRRIGQSAATTGASRR*R-----------RLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKAD-KGNMDALVHLRRKRGAGGRGEATVGE---VALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4501
            ++ADRR +R V+V+R   E  +SDHNLV   VR+P R APNRR R  +  +    DL RL  D +LR    N      PP        + A ++   ++S A E  P ++  RG +GW      + E+S A ++ + A++ LR    NS     L+  +K A K     R  A+ +FF  +VR+L+ ++REGDQ  FY+HLK +++ GKR  +S  +KDE+G +LRD   IR+RW RWFH L N KSP +D + A+ + +WP            +   A      ++NR             V P       I  F+ G     R           +G +P  W        F K    +     G S               RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR DD   S WF + Q LRQGC LA LLFN+F AA+  +A T F  D K   D +    R    G RG +   +   V +A  LW MLYADDA +VS +PE L KMM +IV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  +  +  +  E+  R+  AW  +R+ +  +Y R  A  +LKIR+L+ EV++T+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ FAG V RMED RL K ++   M GG    GG++
Sbjct:   67 READRRFMRNVSVKRVDFE--DSDHNLVLTTVRLPPRVAPNRRVRGNSGSSRIRIDLERLRKDKHLRDAFQNRASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGWYTSE-AQHEISDASKEIKAAQQQLRGASKNSACEATLKAMLKAARKKRSIARWRALETFFEIYVRQLEKKSREGDQAVFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEA---VREMANRKA-----------VGPDDLPAELIKLFLDGDQGLLREFHAIVVDVWQTGDVPQQWKDATIKVLFKKGDTMECGNYRGISLVAHAGKVLLKVVATRLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLGRFGVPPKMLAVIRHFHEGMRARVRTDDGQYSEWFDVGQGLRQGCNLAPLLFNLFSAAMRMVAVTEFDKDPKVTADMIKIATRVECTGKRGRSAGKKAMMVTVAEALWDMLYADDAAIVSLTPESLEKMMSIIVRVAGLFGLMVSEPKTEIMCMLPKGLGERP--FAVSAAGQTYKQTDRFVYLGRTICADGKVDREITSRICRAWKCYRRNSTSMYDRKRANRQLKIRLLQAEVVQTLLYGCASWSLAAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFAGFVMRMEDNRLPKRMLLGAMAGGTGYRGGQE 837

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5L020_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L020_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 1.670e-147
Identity = 311/735 (42.31%), Postives = 414/735 (56.33%), Query Frame = -2

Query: 2243 VRIPRRSAPNRRKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNS----NLRKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLKTMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWPCR*EFSLRCRS*QTPSARWRTGRLSNRTG-SPSSCSRSPSTVIPPCA-GDCSISSFVFGGGARCRSSGKMPSSWYFTKRRIGQSAATTGASRR*RRLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFK------ADKGNMDALVHLRRKRGAGGRGEATVGEVALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTATFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTG-SESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRK 4408
            VR+P R APNR  R  +  +    DL+R+  D +LR    N      PP        + A ++   ++S A E  P ++  RG +G  +  GV+ E+S A +    A++ LR    NS     L+  +K A K     R  A+ +FF  +VR+L+ ++REGDQ GFY+HLK +++ GKR  +S  +KDE+G +LRD   IR+RW RWFH L N KSP +D + A+ + +WP            +   A      ++NR    P      P+ +  P   GD  +  F+ G    C +   +    +  K  +   A          RLS YCER GIL EEQSGFRP+ S  DM+F I RL ELARKK    + CF+DLTKAYDSVDR LLW VL RFGVP  M++VIR FH+GMRA VR +    S WF + Q LRQGC LA LLFN+FFAA++ +A   F       AD   +   V    K+G     + TV  V  A  LW MLYADDA +VS+SPE L KMM VIV V   FGL VSE KTEIMC+  KG  E    F V AAGQ Y QT+ FVYLG  ++ +  +  E+  R   AW  +R+ +  +Y R  A  +LKIR+L+ EV+ET+LYGC +WS  A HY  L   H +FLTRCI W K  R+D P+SY   L++ G  E+IEAT+R+ R+ F G V RMED+RL K ++   M GG    GG++
Sbjct:    3 VRLPPRVAPNRPVRGNSGSSRIPIDLKRITKDKDLRVASQNRASSRPPPTALRRPTGETAAELTATVMSAAAETAPLARCARGQRGGYSS-GVQHEISEASKAIRAAQQQLRVASKNSAFEATLKAMLKAARKKRSIARWRALETFFEGYVRQLEKKSREGDQAGFYRHLKMIDVEGKRSFTSQNIKDEDGKVLRDPTFIRQRWARWFHKLLNTKSPTIDLHAADKVKRWPTCVPLDDIPSLLEVEEA---VREMANRKAVGPDDL---PTELTKPFLDGDQVL--FMKGDTMECGNYRGISLVAHAGKVLLKVVAT---------RLSHYCEREGILPEEQSGFRPHRSTLDMLFAIQRLHELARKKSTAVFACFVDLTKAYDSVDRDLLWDVLRRFGVPPKMLAVIRHFHEGMRAHVRPNGGQYSEWFDVSQGLRQGCNLAPLLFNLFFAAILMVAVAEFDKDPKVTADMVKIGTQVEYTGKKGRSAGRKTTV--VTDAEALWAMLYADDAAIVSRSPESLEKMMSVIVRVAGLFGLMVSEPKTEIMCMLPKGIEEHP--FTVSAAGQTYKQTDRFVYLGRTISADGKVDREITSRTCRAWKCYRRNSASMYDRRRADRQLKIRLLQAEVVETLLYGCASWSLTAEHYTKLNGTHRQFLTRCIGWSKRKRSDRPLSYAQALIQAGCEETIEATVRKRRLCFVGFVVRMEDSRLPKRMLSGAMAGGVGYRGGQE 715

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5K7U5_9PHAE (Reverse transcriptase domain-containing protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U5_9PHAE)

HSP 1 Score: 494 bits (1271), Expect = 1.860e-144
Identity = 342/897 (38.13%), Postives = 476/897 (53.07%), Query Frame = -2

Query: 2231 ELHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRDKL*----------IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSR--LDYILTKQADRRPIRCVNVRRPPLEA--PESDHNLVYAKVRIPRRSAPNR------RKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNLRKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLK-TMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWPCR*EFSLRCRS*QTPSARWRTGRLSN-RTGSPSSCSRSPSTVI---PPCAGDCSISSFVFGGGARCRSSGKMPSSW-------YFTK---------------RRIGQSAATTGASRR*RRLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKADKGNMDALVHLRRKRGAGGRGEATVGEVALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTA----TFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTGSESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRKKSGW 4768
            +L  ++   PA+EY+FV  DANA TG  G   GE +   +G YGR++L            DN+LA+L+TFF T + G+ +TF   N   G+ R  LDYILT+QA R  +  + V   P+     +SDHN+V A V +  R A NR      ++R   ++  ++   R  ++    RF + N +  +  P    T   ++A +  E +L  A   +    R R    W         ++ A  +R  AR   +A P+ +  R  +K   K ++     ++      +V +L+   ++ D  G Y+HLK +  L G++     +V DENGVLLR+ + I KRW R+F+TL N+KSP L+P++ E + Q P                    T  L N +   P   +     V     P   +   + FV        + G+MP  W        + K                 +G+  A T  +R    LS +CE   IL EEQ GFRP  S   M+FV+ RLQEL R++RIP Y+CFIDL KAYDSVDR LLW VLAR G+P  MI+VIR+FH GMRA VR DD   S WF + Q LRQGC ++ LLFN+FFAA + +  TRF  D+  +  LV+L+ +     RGE  +  V  A  +WGMLYADDAGVVS+S + L +MM +IV V   FGLTVSE KTE + +R K R            +EAAGQ Y QT EF YLG  VN+  DL+ E++ R + AW   ++Y  EL+ RP AP  LK R+L+ E +E +LYGC+TWSPR  HY  L+  HHR L R I +R+       +SY   L + G +S+EAT+R+ R+LFAG VAR  D RL K +MF E+VGG     G  +  W
Sbjct:  148 KLDSLVRRTPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTF---NGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQ---RF-LCNLLARSGAP---ATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWR-ILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFV-----EVWNGGEMPQEWKDAIIKVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNR----LSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKEEER---RGEGLLDRVRRA--VWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGRGNPEQNW 1016

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5K319_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K319_9PHAE)

HSP 1 Score: 494 bits (1273), Expect = 4.750e-142
Identity = 342/897 (38.13%), Postives = 477/897 (53.18%), Query Frame = -2

Query: 2231 ELHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRDKL*----------IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSR--LDYILTKQADRRPIRCVNVRRPPLEA--PESDHNLVYAKVRIPRRSAPNR------RKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNLRKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLK-TMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWPCR*EFSLRCRS*QTPSARWRTGRLSN-RTGSPSSCSRSPSTVI---PPCAGDCSISSFVFGGGARCRSSGKMPSSW------YFTKR----------------RIGQSAATTGASRR*RRLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKADKGNMDALVHLRRKRGAGGRGEATVGEVALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTA----TFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTGSESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRKKSGW 4768
            +L  ++  +PA+EY+FV  DANA TG  G   GE +   +G YGR++L            DN+LA+L+TFF T + G+ +TF   N   G+ R  LDYILT+QA R  +  + V   P+     +SDHN+V A V +  R A NR      ++R   ++  ++   R  ++    RF + N +  +  P    T   ++A +  E +L  A   +    R R    W         ++ A  +R  AR   +A P+ +  R  +K   K ++     ++      +V +L+   ++ D  G Y+HLK +  L G++     +V DENGVLLR+ + I KRW R+F+TL N+KSP L+P++ E + Q P                    T  L N +   P   +     V     P   +   + FV        + G+MP  W         K+                 +G+  A T  +R    LS +CE   IL EEQ GFRP  S   M+FV+ RLQEL R++RIP Y+CFIDL KAYDSVDR LLW VLAR G+P  MI+VIR+FH GMRA VR DD   S WF + Q LRQGC ++ LLFN+FFAA + +  TRF  D+  +  LV+L+ +     RGE  +  V  A  +WGMLYADDAGVVS+S + L +MM +IV V   FGLTVSE KTE + +R K R            +EAAGQ Y QT EF YLG  VN+  DL+ E++ R + AW   ++Y  EL+ RP AP  LK R+L+ E +E +LYGC+TWSPR  HY  L+  HHR L R I +R+       +SY   L + G +S+EAT+R+ R+LFAG VAR  D RL K +MF E+VGG     G  +  W
Sbjct:  435 KLDSLVRRIPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTF---NGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQ---RF-LCNLLARSGAP---ATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWR-ILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFV-----EVWNGGEMPQEWKDAIIKVLHKKGDRSNCNNYRGISLLSHVGKVLAKTITNR----LSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKEEER---RGEGLLDRVRRA--VWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 1303

[Close]

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Match: A0A6H5JLM6_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLM6_9PHAE)

HSP 1 Score: 491 bits (1265), Expect = 1.670e-139
Identity = 341/897 (38.02%), Postives = 475/897 (52.95%), Query Frame = -2

Query: 2231 ELHRMIASVPAREYVFVSTDANASTGKRGEGGGEADSKVLGAYGRDKL*----------IDNKLALLDTFFCTPKSGVSYTFQSANRSKGQSR--LDYILTKQADRRPIRCVNVRRPPLEA--PESDHNLVYAKVRIPRRSAPNR------RKRDITKETPKLADLRRLMTDPNLRFQVANAMVDALPPIPDGTCISDIATDMAEVMLSTATELVPCSKRPRGAQGWCAGPGVEAEMSAAWQQREEARRYLRAEPHNSNLRKAVKMAGKNLRNVRKAAVLSFFWDFVRKLKTRNREGDQVGFYKHLK-TMNLGGKRDRSSAYVKDENGVLLRDVELIRKRWVRWFHTLPNAKSPRLDPNIAEGLDQWPCR*EFSLRCRS*QTPSARWRTGRLSN-RTGSPSSCSRSPSTVI---PPCAGDCSISSFVFGGGARCRSSGKMPSSW-------YFTK---------------RRIGQSAATTGASRR*RRLSEYCERVGILTEEQSGFRPNPSPTDMMFVICRLQELARKKRIPFYVCFIDLTKAYDSVDRTLLWTVLARFGVPQIMISVIRQFHDGMRACVRLDDRVCSRWFAMEQSLRQGCVLALLLFNIFFAAVINLASTRFKADKGNMDALVHLRRKRGAGGRGEATVGEVALATPLWGMLYADDAGVVSQSPEKLRKMMGVIVVVCTAFGLTVSEAKTEIMCLRAKGRPESTA----TFGVEAAGQVYNQTNEFVYLGENVNQNADLSIEVDRRVRNAWCSFRKYTLELYGRPSAPLELKIRMLRTEVLETMLYGCVTWSPRACHYDTLRRAHHRFLTRCISWRKHNRADHPISYLDTLLKTGSESIEATLRRSRILFAGLVARMEDTRLLKCVMFVEMVGGASCVGGRKKSGW 4768
            +L  ++   PA+EY+FV  DANA TG  G   GE +   +G YGR++L            DN+LA+L+TFF T + G+ +TF   N   G+ R  LDYILT+QA R  +  + V   P+     +SDHN+V A V +  R A NR      ++R   ++  ++   R  ++    RF + N +  +  P    T   ++A +  E +L  A   +    R R    W         ++ A  +R  AR   +A P+ +  R  +K   K ++     ++      +V +L+   ++ D  G Y+HLK +  L G++     +V DENGVLLR+ + I KRW R+F+TL N+KSP L+P++ E + Q P                    T  L N +   P   +     V     P   +   + FV        + G+MP  W        + K                 +G+  A T  +R    LS +CE   IL EEQ GFRP  S   M+FV+ RLQEL R++RIP Y+CFIDL KAYDSVDR LLW VLAR G+P  MI+VIR+FH GMRA VR DD   S WF + Q LRQGC ++ LLFN+FFAA + +  TRF  D+  +  LV+L+ +   GG     +  V  A  +WGMLYADDAGVVS+S + L +MM +IV V   FGLTVSE KTE + +R K R            +EAAGQ Y QT EF YLG  VN+  DL+ E++ R + AW   ++Y  EL+ RP AP  LK R+L+ E +E +LYGC+TWSPR  HY  L+  HHR L R I +R+       +SY   L + G +S+EAT+R+ R+LFAG VAR  D RL K +MF E+VGG     G  +  W
Sbjct:  639 KLDSLVRRTPAKEYLFVLMDANAQTG--GGIAGENEG-TMGEYGRNELNENGELLLTFATDNRLAVLNTFFDTRRGGIWHTF---NGPSGRERRCLDYILTRQAHRDRVSNMEVVPQPVRPVRADSDHNIVVATVDLGGRLAHNRPIRTNPKRRQFNRQDLQVEAARWAVSQ---RF-LCNLLARSGAP---ATTTQEMAKEFTEALLGAAETELSEEPRRRRTTEWNMTTAARTALATALDKRRAARHSFKAGPNAATWR-ILKATCKGVKATIATSIYDHLERYVTELEAIYQDRDMRGLYQHLKRSTGLSGRQAGGQQFVTDENGVLLRNKDAILKRWRRFFNTLLNSKSPTLNPDVVEQVMQRPATRATRHLAAVPDLEEVEAATKGLGNWKAVGPDLLAAELLKVDGDDEPVVLERLRAIFV-----EVWNGGEMPQEWKDAIIKVLYKKGDRSNCNNYRGISLLSHVGKVLAKTITNR----LSAFCEANEILPEEQCGFRPGRSTVCMLFVVRRLQELGRRRRIPLYMCFIDLQKAYDSVDRELLWKVLARAGIPGEMIAVIRKFHVGMRARVRTDDGELSDWFPVTQGLRQGCSMSPLLFNVFFAAPLEIIVTRFSQDEVIVRDLVYLKEEERRGG---GLLDRVRRA--VWGMLYADDAGVVSKSADGLARMMTIIVEVFREFGLTVSERKTETLVMRVKERQRXXXXXXXVLTIEAAGQRYAQTTEFRYLGGLVNEQGDLTREINHRSKAAWACIKRYATELFDRPGAPFRLKARLLQAEAVEALLYGCMTWSPRRNHYGMLQTTHHRLLLRVIGYRRKRGTYRQLSYAQALKRVGCQSVEATVRQRRLLFAGAVARQPDGRLPKRLMFGELVGGEDPGQGNPEQNW 1507

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig119.72.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5KC90_9PHAE	6.450e-178	42.16	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K8Z5_9PHAE	6.180e-177	42.46	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JQH5_9PHAE	9.800e-177	42.16	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5KDI8_9PHAE	1.210e-174	42.16	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JM98_9PHAE	2.390e-163	40.98	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5LM52_9PHAE	1.150e-151	41.65	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5L020_9PHAE	1.670e-147	42.31	Reverse transcriptase domain-containing protein (F...	[more]
A0A6H5K7U5_9PHAE	1.860e-144	38.13	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5K319_9PHAE	4.750e-142	38.13	Reverse transcriptase domain-containing protein n=...	[more]
A0A6H5JLM6_9PHAE	1.670e-139	38.02	Reverse transcriptase domain-containing protein n=...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig119	contig	A-nodosum_M_contig119:667180..679438 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Properties


Property Name	Value
Stop	1
Start	1
Model size	2370
Hectar predicted targeting category	other localisation
Exons	8
Cds size	1035

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig119.72.1	prot_A-nodosum_M_contig119.72.1	Ascophyllum nodosum dioecious	polypeptide	A-nodosum_M_contig119 675446..678183 +

The following UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866606.2594016-UTR-A-nodosum_M_contig119:667179..667259	1680866606.2594016-UTR-A-nodosum_M_contig119:667179..667259	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig119 667180..667259 +
1680866606.337159-UTR-A-nodosum_M_contig119:678183..679438	1680866606.337159-UTR-A-nodosum_M_contig119:678183..679438	Ascophyllum nodosum dioecious	UTR	A-nodosum_M_contig119 678184..679438 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1680866606.2689273-CDS-A-nodosum_M_contig119:675445..675698	1680866606.2689273-CDS-A-nodosum_M_contig119:675445..675698	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 675446..675698 +
1680866606.277615-CDS-A-nodosum_M_contig119:675969..676156	1680866606.277615-CDS-A-nodosum_M_contig119:675969..676156	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 675970..676156 +
1680866606.2880714-CDS-A-nodosum_M_contig119:676383..676481	1680866606.2880714-CDS-A-nodosum_M_contig119:676383..676481	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 676384..676481 +
1680866606.2991722-CDS-A-nodosum_M_contig119:676763..676897	1680866606.2991722-CDS-A-nodosum_M_contig119:676763..676897	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 676764..676897 +
1680866606.3086503-CDS-A-nodosum_M_contig119:677100..677202	1680866606.3086503-CDS-A-nodosum_M_contig119:677100..677202	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 677101..677202 +
1680866606.3192859-CDS-A-nodosum_M_contig119:677583..677763	1680866606.3192859-CDS-A-nodosum_M_contig119:677583..677763	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 677584..677763 +
1680866606.3282156-CDS-A-nodosum_M_contig119:678102..678183	1680866606.3282156-CDS-A-nodosum_M_contig119:678102..678183	Ascophyllum nodosum dioecious	CDS	A-nodosum_M_contig119 678103..678183 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at A-nodosum_M_contig119:667180..679438+
coding sequence from alignment at A-nodosum_M_contig119:667180..679438+

protein sequence of mRNA_A-nodosum_M_contig119.72.1

>prot_A-nodosum_M_contig119.72.1 ID=prot_A-nodosum_M_contig119.72.1|Name=mRNA_A-nodosum_M_contig119.72.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=345bp
MSKMNNSYESIDSASSSTNSAPSRSCDEVEGSSKSSPAPKIKSGGDTVQD
FVKGRLAVAGLTLWAGVATAAAVLLAFSPRGDTRGIVDSAARGGGSSSAT
GTTGTSVDALHPKAWCLRNAMHQTFSGVILKDDDEVFPKGKWNGDQWSYH
DRITNGFHVLATIGGDTYGFWDLTVVRITGKTIFKAGYKGDTCLFYTEIS
EPGDHIDDEAACRGSAWAGSVSLKGEVEYGYGTKAERWSGEISQDHEAGN
WSLPPGTESLIDFQRSPTDEGEVRLLYHRVVAPTKGIFGWAGGESLTFDL
VFTGGESMAVSDILNLVKVPIACETRSGEFHDEEVRGAGRAIRK*

mRNA from alignment at A-nodosum_M_contig119:667180..679438+

Legend: UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_A-nodosum_M_contig119.72.1 ID=mRNA_A-nodosum_M_contig119.72.1|Name=mRNA_A-nodosum_M_contig119.72.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=12259bp|location=Sequence derived from alignment at A-nodosum_M_contig119:667180..679438+ (Ascophyllum nodosum dioecious)
TAATTGCGACGAAACAGCGAGCAAACAGGAAAAGTTATCGCTGCCTTGCT
GCTGAACAGTTGCCAAGTGCTACTGATCAGGTACCGAACAGCACACAAGG
TCATCCATGATAGATTGATTGTTCGAGGTTAGTTCAGTTTGCTGCTGTCA
GAGGTTTTCTAATTTTTCCTAACAGTGCAGTGTTATCTCTGTATAGCTGT
AACTCAAATTTTAAAATACAGATTGCAGCACTTCAGGCAGAAGCTGCGTA
GTTCGTACCCAAAGATATTGTGTTGACGCCGATAAGTTTCCGGTGTTCTC
GGGTGGTTCGACCTGGCAAGGGTTTTGTCGCGATTTGAATCTCTGTTGGT
TTGAATAGCGGGTTGTCACCATGAAGTGACCCGCTGACCTTCGTTCCTCT
TTGTGACCACTTACCGGATTGGCAACCGCGTATAATATACCGTACTGTCT
TGTGCCATCCGTAGATCCACCTGCGTCTGATGCATTAGGGTATCGCGACT
TGCGAGGGCTCTTTCGCGCATCAAGCACTGTTAATGTCCTGATCTTTCTT
CAAAGGAATGTTTATACTCCCCAGCTTCAAGAATACTACATTGTATTTTG
TTTTGTTCTGTGTGGTGGCCCTGCATGGCGATTAATGTAAGTGTACAGTA
TAACGATGGGCTTCCCCCCGACATGATACTGTTGACCCAAAGTTACAGGT
ATACCTTCAGGGAACCCATATAAATGCCATGAAGAGGCAACAATTTTAAA
CACGAAGTGGGAAATACAAACATGTACCGGTACTGAATAAGATGAAGCTT
GTAACTCAAATTTTAAAATACAGATGGCAGCACTTCAGACAGAAGCTGCG
TAGTTCGTACCCAAAGATATTGTGTTGACGCCGATAAGTTTCCGGTGTTC
TCGGGTGGTTCGACCTGGCAAGGGTTTTGTCGCGATTTGAATCTCTGTTG
GTTTGAATAGCGGGTTGTCACCATGAAGTGACCCGCTGACCTTCGTTCCT
CTTTGTGACCACTTACCGGATTGGCAACCGCGTATAATATACCGTACTGT
CTTGTGCCATCCGTAGATCCACCTGCGTCTGATGCATTAGGGTATCTCGA
CTTGCGAGGACTCTTTCGCGCATCAAGCACTGTTAATGTCCTGATCTTTC
TTCAAAGGAATGTTTATACTCCTCAGCTTCAAGAATACTACATTGTATTT
TGTTTTGTTCTGTGTGGTGGCCCTGCATGGCGATTAATGTATGTGTACAG
TATAACGGTGGGCTTCCACCCGACATTATGCTGTTGACCCAAAGTTACAG
GTATACATTCGGGGAACCCAAATAAATGCCATGAAGATGTAACAATTTTA
AACACGTAGTGGGAAATACAAACATGTACCGGTACTGAATAAGATGGCAT
GGAAAAAAGTCCCCAGGGACTTTTTAGAAGAAAAATCAGAACGCGCTTAG
ACCTTCTGAGCATCCCCCTGTAAAACGTAAATGTACTTCCTCTTCACCAA
TTACAATAATGTTGTAACGTTCCTTGTGTTCTATTAATAGACTATAAGCC
CGTAGGCCCTATTGTTAAAAGGGTCAATTGCACTATTCTTGTATATTGAA
TTGATTGATTGATTGGATTCTCACATAAGCTGATGTCAAAAATCCAGCCC
GTGGTCACAAGGTAGAAAAAACACCATCCGGAAGGAAAGAACGTACGACG
TACTCTCCATACAACAAAGAGAAAGCGGAAAAATACTCGGAAAAAGCGAC
ACCTCCAAATAAACCAACAACAAAAAAAGAACAAAACAAAAAAAGAAACA
CGTGTGGCTATCGGAACGCCTGCATATCGAAGGACGATTGAACGACGGGC
CGCGGCTTCAACTAAAGCATAGAGACGAAAAACGAAGCAAAACAAAATAA
ACGTAACACCAGAGAAAAAACGCCATGGCATCTGCAAACCAAACGCCCGG
AGGATACAAGTTCGCGCCACTTGTGGCTAGTCAACAAGGGCGAGCGAACC
AGCACGAGCCCGCTTGCTTTGGGCTATCCTCTTCTTGGTTCTTCCCGTCA
CGTTCGGGCATACCACTGCATGCCGTAGTCCAGCCTTGGTTTTCTCTGCA
ACGATCCATTTCGCCATGAAATGTTTCGCCCCTTGTTCAGCCGTTCTGCG
CCATTCCCCCTCGTCCTGGGCTGCAGTCGTCCACTGGTCGGCGTTGATGC
CGAAAGCTCTGAGGTCGTCCAGGAAACACCCCATCCACTCTTTTTCCTGC
CCCCCACACAGCTCGCGCCCCCCACCATTTCTACGAACATCACGCACTTC
AGCAGTCTCGTATCCTCCATGCGCGCCACAAGTCCCGCAAACAAGATCCG
GCTCCTGCGTAAAGTCGCCTCGATACTCTCACTTCCCGTCTTGAGGAGCG
TGTCCAGATAGGAAATCGGGTGGTCGGCGCGATTGTGCTTTCGCCAACTG
ATGCAGCGAGTCAAGAACCTGTGGTGGGCTCGGCGCAACGTGTCGTAGTG
GCACGCGCGCGGGCTCCACGTGACGCAGCCGTACAGCATTGTCTCGAGCA
CCTCGGTTCTTAGCATCCGTATTTTGAGCTCGAGGGGAGCGCTCGGTCGG
CCGTACAGTTCGAGGGTGTACTTCCGGAAGCTGCACCATGCGTTGCGTAC
GCGCCGGTCGACCTCGATGGACAGGTCGGCATTTTGGTTGACGTTTTCCC
CGAGGTATACAAACTCGTTCGTCTGGTTGTACACCTGGCCCGCTGCCTCT
ACGCCGAATGTGGCGGTGGACTCCGGCCTCCCCTTCGCGCGTAAACACAT
GATCTCAGTCTTGGCCTCCGATACGGTGAGGCCAAACGCCGTGCACACGA
CCACGATCACCCCCATCATCTTCCTCAACTTCTCGGGTGATTGCGAGACG
ACCCCGGCATCGTCAGCGTAAAGCATACCCCAAAGCGGCGTCGCGAGGGC
TACCTCTCCGACAGTTGCTTCCCCCCGCCCCCCCGCCCCCCTTTTCCTCC
TCAGGTGTACCAAAGCGTCCATGTTGCCTTTGTCCGCCTTGAAACGCGTG
GAGGCCAAGTTTATAACCGCCGCGAAGAAGATGTTGAACAGGAGGAGTGC
GAGCACGCACCCTTGACGAAGGCTTTGTTCCATAGCGAACCACCTCGAGC
ACACCCTGTCGTCGAGCCGCACGCATGCTCGCATGCCATCGTGGAATTGA
CGAATGACCGAGATCATAATCTGTGGCACGCCAAAACGGGCGAGTACTGT
CCAGAGGAGGGTTCGATCAACGGAGTCGTACGCTTTGGTAAGGTCGATAA
AGCATACATAGAACGGGATTCGTTTCTTCCGCGCCAGCTCCTGTAACCGA
CAAATCACAAACATCATATCGGTGGGAGAAGGGTTCGGTCGGAAACCACT
CTGTTCCTCCGTCAGGATCCCCACGCGCTCACAGTACTCGCTGAGGCGGC
GCTACCGGCGAGATGCCCCTGTAGTTGCCGCACTCTGTCCGATCCTTCTT
TTTGTGAAGTACCATGATGATGGCATCTTTCCACTGCTGCGGCACCTCGC
CCCCCCTCCAAATACGAACGACGATATCGAGCAGTCTCCGGCGCAGGGCG
GGATCACCGTTGAGGGTGATCTTGAACAGCTCGACGGAGACCCCGTCCGG
TTCGACAGCCTTCCCGTTCGCCAACGAGCGGATGGCGTCTGTCAGCTCCT
GCATCGTAGGCTGAACTCCTAGCGGCATGGCCACTGGTCAAGGCCTTCTG
CGATGTTCGGGTCAAGCCTCGGTGACTTGGCGTTGGGGAGAGTGTGGAAC
CACCGGACCCATCGTTTGCGGATGAGTTCAACGTCCCTCAGGAGGACGCC
GTTCTCGTCTTTGACGTACGCCGAGCTGCGGTCTCGCTTCCCTCCCAGGT
TCATCGTCTTAAGGTGCTTGTAGAAGCCGACCTGGTCGCCTTCTCGATTG
CGTGTTTTGAGTTTGCGGACGAAGTCCCAAAAAAAGCTCAGCACGGCAGC
CTTGCGCACATTCCGAAGGTTTTTACCAGCCATTTTCACGGCCTTTCGAA
GGTTGCTGTTGTGGGGTTCTGCGCGTAGGTACCTCCTCGCCTCCTCTCTC
TGTTGCCATGCTGCGCTCATCTCAGCTTCCACACCGGGCCCCGCGCACCA
ACCCTGTGCTCCGCGTGGGCGCTTAGAGCACGGTACCAACTCGGTCGCAG
TGGAAAGCATGACTTCGGCCATGTCGGTGGCGATGTCACTGATGCAGGTG
CCATCGGGGATTGGTGGTAATGCGTCAACCATCGCGTTCGCAACTTGGAA
TCGAAGGTTCGGGTCAGTCATCAACCGCCtAAGGTCGGCCAGCTTCGGAG
TTTCcttGGTAATGTcCCTCtTTCTCCGGTTTGGTGCGGACCTGCGTGGG
ATGCGGACTTTGGCGTACACGAGATTGTGATCCGATTCTGGTGCCTCTAG
GGGGGGGCGGCGGACATTAACGCAGCGGATGGGTCGGCGGTCCGCCTGCT
TTGTCAGGATGTAATCCAAACGTGATTGACCTTTGCTGCGGTTGGCGCTT
TGGAACGTATAGGACACGCCACTTTTAGGGGTGCAAAAGAAAGTGTCCAG
AAGAGCGAGCTTGTTGTCTATTTATAGCTTGTCTCGGCCATATGCGCCCA
ACACTTTGCTGTCTGCTTCTCCTCCGCCCTCGCCTCTCTTCCCTGTGCTG
GCGTTCGCGTCTGTTGAAACGAAGACGTATTCCCGAGCGGGGACTGATGC
TATCATACGGTGCAGTTCAGGGCTGCCATGTATTTGGCCTTCTGCCCCTC
TGGCGCTTCCTCGGTCGGGGCGTAGGCTACCACGAACGTAACGAAATTTG
ATTTAAGCGAAATTCGGGCCTTCAGGAGACGTGCGCTGATGCACTCGATT
GTGGTGCCGTTCTCGCCAGCATTTTTAACGATCTCCTCCTTTATCGCCAG
TCCCACCCCATGCTGCCCTTTCCTGCCCTTAACCATGGTACAATCACCAC
TAAAAAAGACGCGGTATCCAGATGCAGAAATTTTGGAAGTTCCGTCCCTT
TTGGTCTCCTGTAATCCGATGACGTCACAATCCTTTGCAGCACAGGTTCT
CAGCAGGGTGTCTATGTGGCCGATACCGTTGACACCGTTGACCGCTGCTG
TGCGAACGTTGAACGTACCGAACGTGAGCTCCTCCAGCCGAGACCTCGCC
CTGGCGGCCTTGTGCTTCTTGCGGGCGGATTTCCTCTCCGCCCGCTTCCC
CCGTTGCTTTTTCCGAGCAAATACCCTCCGCTTTTTACTCAGTTCCGGGT
GCTTCCTACCCAGGTTCTTGCCTTCGTTTTTCCGACGTGTTGGGTAGGGC
ACTCCCACCACGCCTCGACTTCTCCATCGTCGTCACTTCTGCTTACTCGC
GTGAGCCCTCCGAGCATTTCTCCTCTCCTCGCTTCGGGTCCCACGTTTTC
CGCGGCGACGGTGTCCCAACTTTGCTTCCGCAGCACGGTTGCCGCGGGAA
ACGATTTCGCTTTGTTGGGGGGCATTGCCGCCAGTCGATGCTGTTGGCAG
GCTTGCACTTTCAGCATCGACGAGTTCTCGCATCAATCGATGTCATGAAA
GCTCTATAGCTAGGACGGCGAAGGTTTACTCCTGCCGAGCTGCCTAAGCC
TCAGCAACTTCCCTCGGTCGCTATTACTAATCGATTGTGTTTATTATTAA
CCTACTTAATATTTAATTATCTACTATAATGTTTTTGTTTTGTGTTTTGT
TTTTCGTCTGGTGTCCCTGCAATGCGATTAATGTAAGTGTACAGCATAAC
GGTGGGCTTCTCCACATTATACTACCCAATGTTACTACCATCGGGGAACC
CGTTGAGATGCCATGAAGAGGTTTTGTCTTTGCAGCCTATGATCCCACCT
AAACGTTTTGACATTTTCCCCCCTGACTGGGGGGCGCTCACAGAAGGTCT
AGATGCGTTCAGATTTTTCTTTAAAAACCGTTTGAAAGATCAACTTGACT
TTTACAGTTTTTTTTGCTTTTGCCCACAGCCGCTTTGTACCAGTCCCCTT
GTTGTGTCCAAGGTACCATTAGAGCTATAATTTACAAAATTCAACTATTA
ATACAGTATATAATACCTATTAATAGTTCTTGTCTACAGTATGTCTGGTA
GTGAGTTACTCTTAGCAGAGAATGGATCAACCGGGTAAGGCTGCCAATCC
TGCTCATCTTCAGCTAAAACCAAGAAAAATGTTTTTTTCCCCTGTCCCCG
TCCGTTGCCTGACATACCGGTATTACTATTGGTCTCGAGAGACAGGTTCG
GCTGTCCCGCCCCGCGTCAGCCCGCTCATTCTGAATCTGGACTTACTCGC
GGAATTCCTCCCGCTTTACGCGACGGCGTTTATTTATTCAGAGCTATTGT
ACCGTCAACCGCCATCGGGTCACTCCTAGTTTATCCGGTCACGCAGTTCC
GTGTCGATGGCGTTCACTGCCGAGAGTCCGCCGGCACAGGGCCAGTAGTC
CTCAAGGTAATTCGAGTAACGGGTGCTCAGGCACCACCATAGACCAATCA
ACGTGCGCCTCTCTTTTCCCACACCCTTTAAACACTAATGATACGCAATA
GTAGTGGATGAGTGCCATGGCGATTGATGTAAGTGCACAGTGTGTGTGTG
TGTGTATTTATTAAATTGCACATAACCGCGCAATCCGGCCCTGTCATCCT
AGTCATTCTATGCCACTCGCATTGATCCTCCCATGTGTGTGTGTGTGTGT
GTGTTGTCATCCCATTTATTCTGGACGTCAGTTGTGGACGCACCAATCGA
GGTCACACAGGAGGGAGGTCACACAGGATTTCTCCACCTTCCTTCTGCGG
TGCTTTCCCTAATTTTTATCGCGAGAAAGTTTCAGCCGTCCCTTTCCCTC
GTCGACCGTAAAGAGTCGAATAGCTATACTGTGTATGCTCTCATCATGCT
GCCAGTTTTAAAGTGTTCCGATGATGATGAGTTGTTCAAGTGCAGTAAGT
TTAACTTGTTGCACGAGTGAAGTACAAGCAGTGGTTAACCTCGTATTTAG
TATTTATATTGTACTGTAGTACATACCACTTCTGCGGATTCGTGAGTTAG
ATTCTCCACAGGATACAGCATAAATAACTTCTTTTCTTGTGGTTCGATAG
CAATAATTAATAGCGGAAAGCGTGAGAACGCGAGGAAATAAATTTGAAAC
AGTGCTGAACTTGCATCGCGATAAAAAGTCGTACGGCGAGAGCCGGGGAG
AGAAGAGAAGATAGATACTTTAAGTGGCCACAGGCAGGACGGCAACGTTG
CAATATTAATATTAATAGCATTATAGTATTATGATATTAATATTAATAGG
TGGGATTGGTATTATAACCTCTTTCTATTATTACTGGCAATAGTACGTTG
AGGCCCATCGGCCGTAAGTGAGTTACAAAACAAGATAATATCATATATTC
GCTCCCCTCGCTTCAACTAGAAGCTCCCCTGCCCTCGGTAGACGTACCTA
CTCGTACTAATAATATTACATTATAGAGTACTGCTGAAGAGAACAAAAAA
TTACAATGAACATGGTTTGGGAGGGGCGCCCTTATTTATTAGTCTTCAAA
TTCGTATACTGTATACTGTATGCTGTTATATATACATATATATATATTAT
AAAGTGTTTTCTGTATCCAGTCCAGGTCTTCTATAGCTCGATTTTTGGCT
CGCTTTTTCAAAGCAGTACAACAGCCAATCAATGCTGCTTCTCCATTCAC
GTCACATTGTGTCACATTATGTACGTGTACATAAATACATGACATGCACG
TGTGGTATGAGTATGGGTAGTTTGAAGGAAACTATACCTGCGAAATATTA
AACATATTATTTTGACCTGGGTAGCAATCTCGAGTCGTTTTAAAATGATA
TACTCTACAGCCGTACGCCTATTCGTACAAGGAACGGCTAGAGCAGCAAC
ACCAGCACCATTTCCGTCTCGTCACAGTTGTTTCCCGATTTTCAGCCCCC
GATTCCTCCCGCCCGCATAATCCCGCACGATTTTGATCAAACTAAACTTT
ACCGTACAGGGTTAGCGCCTCGCAGTCGCGTCTTCAAGGGGAAGGCTCTC
TCTCCCCACGGATGTCCTTCGATTGGGCGCCATTGTTTATTGCGTATGTG
TCGCAATTCTTTAGAGTGTGTAGTAACTATGTAGATGTACTTGAACATCG
TGTTGGCTTCCCCTAGACCAGCCTGAAACATGCCCTTGGCACATGCCCTT
GGCCTTGGTTCGGCAGATGAGCAAGATGAACAACTCCTACGAGTCGATCG
ACTCGGCATCATCCTCAACGAACTCTGCTCCATCGCGCAGCTGCGATGAG
GTCGAGGGTTCTTCTAAGAGCTCCCCAGCACCGAAGATTAAATCCGGCGG
AGACACTGTTCAGGATTTCGTGAAGGGTAGGCTCGCCGTTGCCGGTCTAA
CCTTGTGGGCGGGGGTGGCGACCGCAGCCGCTGTTCTATTGGCTTTCTCT
CCAAGGGGCGACACCCGAGGTAAGACGGCCACGACAATGCAACCTACGCA
GGGGCGCCCGAAACTCCTCGGTTGATAACACTTGTCTACACTGTTGATCG
GTCCGGTGATCGGAAGCATCCATCCCATGTTTCCCGCTATTTTCGAACGG
CTTGGTCCTGCCACCCTGGCAATTTTGCTCATTTTCCCCCCCTCCACTCG
CAACGTAGGCCCGCGTTCGGTGATGGCTGAATGAGGAACGTATCGCACGA
ACGAAATCTGACTTCGCTTGCAATCGTTCGCGACAACCAGGAATCGTTGA
CAGCGCCGCGCGCGGGGGCGGCTCTTCTTCGGCCACGGGCACAACGGGCA
CTTCTGTCGATGCCCTCCACCCCAAGGCGTGGTGCCTGCGGAATGCGATG
CACCAGACGTTTTCAGGTGTCATCCTCAAGGACGACGACGAGGTGTTTCC
GAAAGGAAAATGGAACGGGGATCAATGGTGAGGAGGATTTACGAAATAAG
GAGAAAGTTGGGGTCGTGGATTGGGGCAAGGAGTGTCCACGCTGCCTGAC
GATTTGGTTGGTTGACGCAAGAGAAAGAAGTCGTGATGTAGTGCTATACA
GATATCGCTGTTGGTTTCGGTTATCACCCGACACGTCGCTTCGCGATGCA
AGCGATGCATTGATTGTCCGATAAATGTACATTGTCCCCACCGCGAGGTG
GCAGGTCGTATCACGACAGAATCACCAACGGGTTTCATGTTTTGGCCACT
ATCGGGGGCGACACCTACGGCTTCTGGGATCTGACAGTGGTCAGAATCAC
TGGTGAGGCAATGTTCAAGACAGTCATAAATATATAGAAGTACACAGCGA
AGTCGACACGCGCTTTCCTTCTTGGTAAACGGTGACCTACACCGATTTGC
AACTTTTTCCCGTGCTGGCCTTGTACGTGATCGCACCAAACTATTAAGGT
GTGAGGATACACAAATTGCCGTGCATACATTTTTGAGTTTTGGTACGAGA
CGCACGACGACACCCACAACTTCCCTAGTTTTTGGTGGCGGGGCAATCAG
TCAATTATTACTTGAATGGTGCGCTGCTTCTCAGGCAAGACGATATTCAA
GGCGGGGTACAAGGGGGACACGTGCCTTTTCTACACAGAAATCTCGGAGC
CCGGCGACCATATTGACGACGAAGCGGCGTGTCGGGGCTCGGCTTGGGCA
GGAAGCGTGTCCTTGAAGGTCGGGAGTGCTGTAGAACCGGCGGGTGTCGT
ACGAGATTTCGTTTTGCAAATGACAAGCTTGTTGCACCATGCAACAGAAA
AAATGTTCCGAGGGTACGTGCCACTTCCGTTGCGTTTCTGAAACCATCTG
CAAAACGACTAACGAGTGTTCGAAAATAACGCCCGCGCGCGTGCCTCTGT
TGCGCGTGGATCTCGGTGCAGGGAGAGGTCGAATATGGGTACGGTACGAA
GGCGGAGCGGTGGTCGGGGGAGATATCACAGGATCACGAGGCGGGGAACT
GGAGTCTACCTCCGGGGACAGAAGTGAGACAAGACCGCATGGTCTTTTGA
TAAGAGGAGTAGAGGACCAACAGTTGATCACAATAAGTTCGAGATTATTT
GGAAAGGTCGAAACACACTAAGCTCTAGGATGTGGTGAGGCCTGGGCATA
TGCATACGGCCCGTAGTTGTTTTTTTGTAAGTGGTTGTTACACAAAACGT
ATTGTTGAAACTTGGCCGTTGTTGCCATGATTCGTTTCGATCCCTTCAGC
AGCTCCCCTAAGAGTCAGTTCGAAACGGGACCAAAAAGTCGTCATGCTCG
CGGATCCCCTGTTGAGCGATTCCGACGACCCACCGGCCAGGGTCCTCTTG
CTGGCGAGTCTCAAGCCCCTCGTTCCCGACATGCCGTGTGGTTCCGTTTC
ACAGTCGCTCATCGATTTTCAGCGGAGCCCGACAGACGAGGGGGAGGTCC
GGCTCCTGTACCACCGCGTGGTGGCCCCGACTAAGGGCATCTTCGGGTGG
GCCGGCGGCGAATCGTTGACTTTCGACCTCGTGTTCACTGGGGGGGAGAG
CATGGCGGTTTCCGATATCCTAAACCTCGTGAAGGCAAGCCAAGCAACTT
CCGACGCAGAACGACTTTCCTGTCTCTCACGCCCTGTGACGCATGCTGCG
CTGCCGCGTATGGTGACATGATGACCCGCACGCTTATACGTAACTTTGCC
GCGTAGCCTCAACCAGTGATACACATGCATGCTTTCATTTCCCTTGGAAC
TTGAGGGAGGGTGGTCAAGAGGCGTGTAGCAGACGGCGCCAAAGTCTATG
CGATGGCGGCCGGACTACGTCAGTTGGGTATTCACCATGTAACCCTTTCT
TTGATGCCACTTGTGTCACGCCAAAACGTTGGTCTCTCGGGTTCGCTAAA
AATGCCGGGTCTTACGCACTCAGGTACCCATAGCGTGCGAGACTAGGTCA
GGAGAATTCCACGATGAAGAAGTTCGGGGTGCAGGACGAGCGATACGCAA
ATGACGTGTGGGGGGCGTTATGGGATGAAGAGGAGTGCTGAATTGGCGTG
ACAAAAGAGGAAAGCGGTGTTAGCCGAATCAGCGACTGTGGCTTTCAGAA
AAGTGAAGGAGGTTATCTGCCCCACGTTGCGTCATCAGTCCACAAGGCAG
GTCGTTCGCGGTGTGAAATAACGAGGCAAAAATGAGTGGAGCTACTCCAG
CGAGTTGTCACGATCTTCAGCAGTTGCCAAGGCCGGTCTGGGCGTACGCT
TATATGAGGTTCTCGGCGGATTAGTCGAGTGTTCGAGGACAATGTCTCCC
ACATGAAACGATTGAAATAGATTAGATGGATGAAATCCTGGGTGGTGATA
TCACTGAGGACGAGATTGATGTCCCATCCCGGTTCGAGTGAAGGAGTATG
AAGTGTGGAGACCGACTGGAAATCTTCGTGACCCAACCAAGTACGAGTTC
TGCTTTCCGCCGTAGTGGGGCGGGCGATCGGAGAGTAGATGACGATGTGG
TTTATACGGAATGCAGAGCTGCACATGTTTTATTTCATCCCCCCTCTCGC
TTGATGCTCCCACGAGAGATATCTGATCCAGCTCTTCGACAGCATTGTCC
GCGGTGTTTTTTCTGTCACAGCTATGTACGGGGCGAGTGATAGTTCTACT
AGCAAAGAGCCTGGCATACCTCCTCCACGAGCTACCATAAAGGTTTCTAA
CAAGACAGTGAGTAGCACGATGTAGAGGACAAGTGCGGTCGAGCCCGTAG
CAAGGGCATGGGGGGAAGAGAGAATCAAAAGGTTGCAGAGGAGGAGGCTG
TTAAGTTATGAAATGAAGGGAATACATGCTTGTAAGAATCGTGATCTGTT
TGCTCTTCCTCGTTGTCATTTGGATAGATAGATAGCAGGGAACATGTGTG
TTGCTTTTCCTAGTTCTTGAATACCTATCCACTTTGTAGAGACTATCAAT
AGCTTTACTGCAAAGTTATTTTGTTCGGGTCAAGGTTCGTAGGGCGACAT
AATACTTAAGCATCCAACACAATATTTGTCCAAACGCCTTTGGCAAGATT
TTTCCATCGTCGAGTTGTTTGGTGGAGTATGGTTTTGTAATCAAGAGAAA
AGTGGAGAGGATGGAGGAGTTCTCCCGAGAAGGCGTTCTCTCCGAACATT
AGGGTATAACTACTGTATCAAAGATATCCCAACGTTGACAGCAGGTCACA
GAAAAATGAAGTCGTCTAGAGATACAACTTACTCCCGCTTATTGATTTCA
TGACTACTG

Coding sequence (CDS) from alignment at A-nodosum_M_contig119:667180..679438+

>mRNA_A-nodosum_M_contig119.72.1 ID=mRNA_A-nodosum_M_contig119.72.1|Name=mRNA_A-nodosum_M_contig119.72.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1035bp|location=Sequence derived from alignment at A-nodosum_M_contig119:667180..679438+ (Ascophyllum nodosum dioecious)
ATGAGCAAGATGAACAACTCCTACGAGTCGATCGACTCGGCATCATCCTC
AACGAACTCTGCTCCATCGCGCAGCTGCGATGAGGTCGAGGGTTCTTCTA
AGAGCTCCCCAGCACCGAAGATTAAATCCGGCGGAGACACTGTTCAGGAT
TTCGTGAAGGGTAGGCTCGCCGTTGCCGGTCTAACCTTGTGGGCGGGGGT
GGCGACCGCAGCCGCTGTTCTATTGGCTTTCTCTCCAAGGGGCGACACCC
GAGGAATCGTTGACAGCGCCGCGCGCGGGGGCGGCTCTTCTTCGGCCACG
GGCACAACGGGCACTTCTGTCGATGCCCTCCACCCCAAGGCGTGGTGCCT
GCGGAATGCGATGCACCAGACGTTTTCAGGTGTCATCCTCAAGGACGACG
ACGAGGTGTTTCCGAAAGGAAAATGGAACGGGGATCAATGGTCGTATCAC
GACAGAATCACCAACGGGTTTCATGTTTTGGCCACTATCGGGGGCGACAC
CTACGGCTTCTGGGATCTGACAGTGGTCAGAATCACTGGCAAGACGATAT
TCAAGGCGGGGTACAAGGGGGACACGTGCCTTTTCTACACAGAAATCTCG
GAGCCCGGCGACCATATTGACGACGAAGCGGCGTGTCGGGGCTCGGCTTG
GGCAGGAAGCGTGTCCTTGAAGGGAGAGGTCGAATATGGGTACGGTACGA
AGGCGGAGCGGTGGTCGGGGGAGATATCACAGGATCACGAGGCGGGGAAC
TGGAGTCTACCTCCGGGGACAGAATCGCTCATCGATTTTCAGCGGAGCCC
GACAGACGAGGGGGAGGTCCGGCTCCTGTACCACCGCGTGGTGGCCCCGA
CTAAGGGCATCTTCGGGTGGGCCGGCGGCGAATCGTTGACTTTCGACCTC
GTGTTCACTGGGGGGGAGAGCATGGCGGTTTCCGATATCCTAAACCTCGT
GAAGGTACCCATAGCGTGCGAGACTAGGTCAGGAGAATTCCACGATGAAG
AAGTTCGGGGTGCAGGACGAGCGATACGCAAATGA