prot_A-nodosum_M_contig1183.22.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1183.22.1
Unique Nameprot_A-nodosum_M_contig1183.22.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length107
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A0U1WNN6_SARFS (Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A0U1WNN6_SARFS)

HSP 1 Score: 196 bits (498), Expect = 2.570e-59
Identity = 93/103 (90.29%), Postives = 97/103 (94.17%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN FYSLHYLLPFLIT MVFVHLGLLHKDGSNNPLGIKT+ ANINFYPYIYVKDLVAFF LV SLS+F+FYFPNALGEPDNYLEADPYSTPAHIVP
Sbjct:  169 FTVGNPTLNRFYSLHYLLPFLITGMVFVHLGLLHKDGSNNPLGIKTRVANINFYPYIYVKDLVAFFVLVFSLSVFIFYFPNALGEPDNYLEADPYSTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A8F0FCD4_9PHAE (Cytochrome b n=1 Tax=Laminaria ephemera TaxID=309364 RepID=A0A8F0FCD4_9PHAE)

HSP 1 Score: 184 bits (467), Expect = 5.560e-55
Identity = 86/103 (83.50%), Postives = 95/103 (92.23%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN F+SLHYLLPF+I  +VFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFAL+  LS+ +FY PN+LG+PDNYLEADPYSTPAHIVP
Sbjct:  169 FTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALLSMLSVVIFYLPNSLGDPDNYLEADPYSTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: D0IPB5_SACJA (Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepID=D0IPB5_SACJA)

HSP 1 Score: 184 bits (466), Expect = 7.850e-55
Identity = 86/103 (83.50%), Postives = 94/103 (91.26%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN F+SLHYLLPF+I  +VFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFF L+  LSI +FYFPN+LG+PDNYLEADPY TPAHIVP
Sbjct:  169 FTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: E6ZES8_ECTSI (Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES8_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 5.370e-54
Identity = 83/103 (80.58%), Postives = 94/103 (91.26%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN F+SLHYLLPF+I  +VFVHLGLLHKDGSNNPLGIKTKTAN+NFYPY+YVKDLVAFF L+  LS+ +FYFPN+LG+PDNYLEADPY TPAHIVP
Sbjct:  169 FTVGNPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANVNFYPYMYVKDLVAFFVLLSVLSVVIFYFPNSLGDPDNYLEADPYGTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A0A7LKY8_SACLA (Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepID=A0A0A7LKY8_SACLA)

HSP 1 Score: 179 bits (454), Expect = 4.890e-53
Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 0 
Query:    9 NPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            NPTLN F+SLHYLLPF+I  +VFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFF L+  LSI +FYFPN+LG+PDNYLEADPY TPAHIVP
Sbjct:  173 NPTLNRFFSLHYLLPFIIAGLVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFVLMSMLSIVIFYFPNSLGDPDNYLEADPYGTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: Q2TUA7_DICDH (Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID=Q2TUA7_DICDH)

HSP 1 Score: 175 bits (444), Expect = 1.330e-51
Identity = 78/103 (75.73%), Postives = 90/103 (87.38%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            Y VGNPTLN F+SLHY+LPFLI  +VFVHLGLLHKDGSNNPLG+KT+ AN+NFYPY YVKDLV FF L+  +S+F+FY+PN LG PDNY+EADPY TPAHIVP
Sbjct:  169 YTVGNPTLNRFFSLHYVLPFLIAGLVFVHLGLLHKDGSNNPLGVKTRLANVNFYPYFYVKDLVGFFVLLSVMSVFIFYYPNMLGHPDNYIEADPYGTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A8E8PEC1_9PHAE (Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=2249243 RepID=A0A8E8PEC1_9PHAE)

HSP 1 Score: 165 bits (417), Expect = 4.010e-47
Identity = 75/103 (72.82%), Postives = 87/103 (84.47%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN FYSLHY LPFLI+ +VF HLGLLHK+GSNNPLG +T+  N++FYPY+Y KDLV+ F L+  LSI VFYFPN LG+PDNYLEADPY TPAHIVP
Sbjct:  169 FTVGNPTLNRFYSLHYFLPFLISGLVFFHLGLLHKEGSNNPLGFRTRIGNLSFYPYLYAKDLVSLFILLSLLSIIVFYFPNTLGDPDNYLEADPYGTPAHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A4Y5T8W2_9PHAE (Cytochrome b n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A4Y5T8W2_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 3.650e-44
Identity = 69/101 (68.32%), Postives = 87/101 (86.14%), Query Frame = 0 
Query:    7 VGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            VGNPTL+ FYSLH++ PF++  +VF+HLGLLHKDGSNNPLGIKT+ +NINFYPY YVKDL++FF ++  LSIFVFY+PN L +P NY++ADP+ TP HIVP
Sbjct:  171 VGNPTLHRFYSLHFIFPFVLVGLVFIHLGLLHKDGSNNPLGIKTRLSNINFYPYFYVKDLLSFFVMLFVLSIFVFYYPNFLLDPLNYIDADPFDTPPHIVP 271
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A7S6UA51_9STRA (Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6UA51_9STRA)

HSP 1 Score: 151 bits (381), Expect = 3.400e-42
Identity = 69/103 (66.99%), Postives = 84/103 (81.55%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + VGNPTLN F+SLHYL+PF+I  +VFVHL LLHKDGS NPLG  +  ++I FYPY YVKDL+ FF L+ SLS+FVF++PN+LG PDNY+ ADP  TPAHIVP
Sbjct:  171 FSVGNPTLNRFFSLHYLMPFVIAGLVFVHLALLHKDGSGNPLGANSSFSSIPFYPYFYVKDLLGFFLLLTSLSVFVFFWPNSLGHPDNYIPADPLVTPAHIVP 273
[Close]
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Match: A0A2E9XNT9_9RICK (Cytochrome b n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E9XNT9_9RICK)

HSP 1 Score: 150 bits (378), Expect = 1.400e-41
Identity = 68/103 (66.02%), Postives = 79/103 (76.70%), Query Frame = 0 
Query:    5 YCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKTKTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYSTPAHIVP 107
            + V NPTLN F+S+HYLLPFLI  +V  HL LLH DGSNNPLGI +KT  +NFYPY YVKDL AF+  +   S FV Y+PN+LG PDNY+EADP  TPAHIVP
Sbjct:  191 FSVDNPTLNRFFSIHYLLPFLIAGLVLAHLALLHTDGSNNPLGINSKTDKLNFYPYFYVKDLTAFYCFIALFSFFVLYYPNSLGHPDNYIEADPLVTPAHIVP 293
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1183.22.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0U1WNN6_SARFS2.570e-5990.29Cytochrome b n=27 Tax=Fucales TaxID=3009 RepID=A0A... [more]
A0A8F0FCD4_9PHAE5.560e-5583.50Cytochrome b n=1 Tax=Laminaria ephemera TaxID=3093... [more]
D0IPB5_SACJA7.850e-5583.50Cytochrome b n=38 Tax=Phaeophyceae TaxID=2870 RepI... [more]
E6ZES8_ECTSI5.370e-5480.58Cytochrome b n=15 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A0A7LKY8_SACLA4.890e-5384.85Cytochrome b n=14 Tax=Phaeophyceae TaxID=2870 RepI... [more]
Q2TUA7_DICDH1.330e-5175.73Cytochrome b n=2 Tax=Dictyotaceae TaxID=2874 RepID... [more]
A0A8E8PEC1_9PHAE4.010e-4772.82Cytochrome b n=1 Tax=Phaeophyceae sp. TaxID=224924... [more]
A0A4Y5T8W2_9PHAE3.650e-4468.32Cytochrome b n=1 Tax=Ishige okamurae TaxID=233772 ... [more]
A0A7S6UA51_9STRA3.400e-4266.99Cytochrome b n=1 Tax=Schizocladia ischiensis TaxID... [more]
A0A2E9XNT9_9RICK1.400e-4166.02Cytochrome b n=1 Tax=Rickettsiales bacterium TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005797Cytochrome b/b6, N-terminalPFAMPF13631Cytochrom_B_N_2coord: 7..90
e-value: 6.9E-12
score: 45.7
IPR027387Cytochrome b/b6-like domain superfamilyGENE3D1.20.810.10Cytochrome Bc1 Complex; Chain Ccoord: 3..107
e-value: 3.6E-33
score: 116.6
NoneNo IPR availablePIRSRPIRSR038885-2PIRSR038885-2coord: 5..107
e-value: 5.7E-40
score: 135.3
NoneNo IPR availablePIRSRPIRSR038885-1PIRSR038885-1coord: 5..107
e-value: 5.7E-40
score: 135.3
NoneNo IPR availablePANTHERPTHR19271CYTOCHROME Bcoord: 5..92
NoneNo IPR availablePANTHERPTHR19271:SF16CYTOCHROME Bcoord: 5..92
IPR005798Cytochrome b/b6, C-terminalPROSITEPS51003CYTB_CTERcoord: 47..107
score: 16.421383
IPR016174Di-haem cytochrome, transmembraneSUPERFAMILY81342Transmembrane di-heme cytochromescoord: 5..97

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1183contigA-nodosum_M_contig1183:249687..250007 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1183.22.1mRNA_A-nodosum_M_contig1183.22.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1183 249240..250007 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1183.22.1 ID=prot_A-nodosum_M_contig1183.22.1|Name=mRNA_A-nodosum_M_contig1183.22.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=107bp
MGRLYCVGNPTLNIFYSLHYLLPFLITCMVFVHLGLLHKDGSNNPLGIKT
KTANINFYPYIYVKDLVAFFALVLSLSIFVFYFPNALGEPDNYLEADPYS
TPAHIVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005797Cyt_b/b6_N
IPR027387Cytb/b6-like_sf
IPR005798Cyt_b/b6_C
IPR016174Di-haem_cyt_TM