prot_A-nodosum_M_contig1177.18.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1177.18.1
Unique Nameprot_A-nodosum_M_contig1177.18.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length251
Homology
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BLAST of mRNA_A-nodosum_M_contig1177.18.1 vs. uniprot
Match: A0A6H5KTQ0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTQ0_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 1.170e-51
Identity = 114/207 (55.07%), Postives = 140/207 (67.63%), Query Frame = 0 
Query:    1 MKLSVFLVLLPSVSAFVTPSSPL---------SAVTTGLVNNVTPLRMTAENKGDNTEPWSVMKILRGVVGTASETKAKVDATSAEMYAELKKKVQVKKERQQLEGKLCSLIRIEKDDMSCKAEEHVRRLASNLEALQDNAAAFGWQRTGLAGSWKLMFSTCKADGKCEKKS-DRLESIEEISYVSENLRLSHT-DSGVLRVYKRVS 196
            MKLSVFLVLLPSVSAFV+P   +                  + TP  + A  + +   PWS+  + R VVG A   KAKVD+T+AE+Y ELKKKV VKKERQ LEG+L SLIRIE + MSCK ++ VRRLA+ LE+LQDNAA FG Q++GL GSWKL++S    +GK   +  DRL +IE ISYVSEN RLSH+ +   LRVYKRVS
Sbjct:    1 MKLSVFLVLLPSVSAFVSPKPVVLNNHLQRXXXXXXXXXXXSSTPTAVGAWKQANGEGPWSIATLWRDVVGPAMN-KAKVDSTAAEVYHELKKKVLVKKERQSLEGQLSSLIRIEGNSMSCKKQDCVRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSRAACEGKGGGRGGDRLPTIEVISYVSENYRLSHSGEEDDLRVYKRVS 206
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BLAST of mRNA_A-nodosum_M_contig1177.18.1 vs. uniprot
Match: D7G1W5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1W5_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.780e-18
Identity = 49/81 (60.49%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:  118 VRRLASNLEALQDNAAAFGWQRTGLAGSWKLMFSTCKADGKCEKKS-DRLESIEEISYVSENLRLSHT-DSGVLRVYKRVS 196
            VRRLA+ LE+LQDNAA FG Q++GL GSWKL++S+   +G    +  DRL +IE+ISYVSEN RLSH+ +   LRVYKRVS
Sbjct:   13 VRRLATELESLQDNAAEFGSQKSGLTGSWKLIYSSAACEGNGGGRGGDRLTTIEDISYVSENYRLSHSGEQDDLRVYKRVS 93
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1177.18.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KTQ0_9PHAE1.170e-5155.07Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G1W5_ECTSI1.780e-1860.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 203..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 207..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1177contigA-nodosum_M_contig1177:201014..209192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1177.18.1mRNA_A-nodosum_M_contig1177.18.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1177 200740..211470 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1177.18.1 ID=prot_A-nodosum_M_contig1177.18.1|Name=mRNA_A-nodosum_M_contig1177.18.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=251bp
MKLSVFLVLLPSVSAFVTPSSPLSAVTTGLVNNVTPLRMTAENKGDNTEP
WSVMKILRGVVGTASETKAKVDATSAEMYAELKKKVQVKKERQQLEGKLC
SLIRIEKDDMSCKAEEHVRRLASNLEALQDNAAAFGWQRTGLAGSWKLMF
STCKADGKCEKKSDRLESIEEISYVSENLRLSHTDSGVLRVYKRVSGGVV
KGKEDDTAQSSGVSSGTGKSKAGRASATAEGRSASKQPLRKRMFFGFLGR
*
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