prot_A-nodosum_M_contig1177.15.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1177.15.1
Unique Nameprot_A-nodosum_M_contig1177.15.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length235
Homology
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A6H5KWT8_9PHAE (Ribosomal_S7 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWT8_9PHAE)

HSP 1 Score: 387 bits (994), Expect = 8.670e-135
Identity = 205/236 (86.86%), Postives = 217/236 (91.95%), Query Frame = 0
Query:    1 MATELNPGGWEEGDAV--PEAMEETGWGGDAEEIDASLPVEEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            MATELNP GW+ G+ V   +A    GWG    E++A L VEE+  +S+V+LFNKW+FDDIEIRDISLEDYIAVKGKYAT+LPHTAGRYQKKRFRKATCPIVERLC +LMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MATELNPDGWDGGEPVVADDAGAAEGWG--EPEVEAPLAVEES-GISDVQLFNKWSFDDIEIRDISLEDYIAVKGKYATYLPHTAGRYQKKRFRKATCPIVERLCCALMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 233          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A835ZGP4_9STRA (Ribosomal protein S7 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGP4_9STRA)

HSP 1 Score: 331 bits (848), Expect = 3.660e-113
Identity = 164/193 (84.97%), Postives = 184/193 (95.34%), Query Frame = 0
Query:   42 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            ++ SE+KLFNKW++DDIEI DISL DY+AV  K+ATFLPHTAGRYQKKRFRKA CP++ERL VSLMRKGRNSGKKL+AAR+V+ T+EIIHLLTD+NP+Q LV+AVIN+GPREDSTRVGSAGVVRRQAVDLSPFRRVNQA+YL+TTGARESSFRNIKTIAECLADEIINA+RGSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MSASEIKLFNKWSYDDIEIEDISLSDYLAVGTKHATFLPHTAGRYQKKRFRKAACPLIERLTVSLMRKGRNSGKKLLAARVVRSTMEIIHLLTDENPLQTLVNAVINAGPREDSTRVGSAGVVRRQAVDLSPFRRVNQAIYLLTTGARESSFRNIKTIAECLADEIINASRGSSNSYAIKKKDEIERVAKANR 193          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: W7TXQ4_9STRA (Ribosomal protein S7, conserved site n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXQ4_9STRA)

HSP 1 Score: 327 bits (837), Expect = 3.730e-111
Identity = 169/211 (80.09%), Postives = 189/211 (89.57%), Query Frame = 0
Query:   31 EIDASLPVEEA-VAVS------EVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            EID ++P E A +AV+      ++KLF KW+  D+EI+D+SLEDYI V GK AT+LPHTAGRYQKKRFRKA CP+VERL  SLMRKGRNSGKKL A RIVKHTLEIIHLLTDQNPVQV+VD++IN+GPREDSTRVGSAGVVRRQAVD+SPFRRVNQA+YLITTGARESSFRNIKTIAE LADEIINAA+GSSNSYAIKKKDE+ERVAKANR
Sbjct:    5 EIDETVPYEPADMAVAFEDNSADIKLFGKWSLSDVEIKDLSLEDYIGVNGKCATYLPHTAGRYQKKRFRKAQCPVVERLANSLMRKGRNSGKKLTANRIVKHTLEIIHLLTDQNPVQVVVDSIINAGPREDSTRVGSAGVVRRQAVDMSPFRRVNQAIYLITTGARESSFRNIKTIAETLADEIINAAKGSSNSYAIKKKDEVERVAKANR 215          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: B8CC69_THAPS (RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID=2696291 RepID=B8CC69_THAPS)

HSP 1 Score: 327 bits (837), Expect = 4.150e-111
Identity = 167/216 (77.31%), Postives = 186/216 (86.11%), Query Frame = 0
Query:   33 DASLPVEEAVAV--------------SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            D   P+EE V V              +EVKLF KW+FDDIEIRDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL   LMRKGRNSGKKLMA RIV+HTLEIIHLLTDQNPVQV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E++NAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    3 DVEDPIEEPVEVEXXXXXEFVAVGGATEVKLFGKWSFDDIEIRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNSGKKLMAVRIVQHTLEIIHLLTDQNPVQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTVAECLAEELVNAARGSSNSYAIKKKDEIERVSKSNR 218          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: D8TJL0_VOLCA (Component of cytosolic 80S ribosome and 40S small subunit n=2 Tax=Viridiplantae TaxID=33090 RepID=D8TJL0_VOLCA)

HSP 1 Score: 325 bits (832), Expect = 9.990e-111
Identity = 158/193 (81.87%), Postives = 180/193 (93.26%), Query Frame = 0
Query:   42 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            +A  +VKLF KW+F+DIE++DISLEDYIAVK KYA ++PHTAGRYQKKRFRKA CPIVERLC SLM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QVLVDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++NAA+GSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MATPDVKLFGKWSFEDIEVQDISLEDYIAVKTKYAVYVPHTAGRYQKKRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVLVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A7S3V821_9STRA (Hypothetical protein n=3 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S3V821_9STRA)

HSP 1 Score: 324 bits (831), Expect = 4.040e-110
Identity = 161/215 (74.88%), Postives = 189/215 (87.91%), Query Frame = 0
Query:   20 MEETGWGGDAEEIDASLPVEEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            +EET +  + EE++           +E+KLF KW+FD+IE+RDISLEDYIA KG +AT+LPHTAGRYQ KRFRKA+CPIVERL   LM+KGRNSGKK+MA RIV+HTLEIIH+LTDQNP+Q++VDAVINSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:    9 VEETTYDEEVEEVEEEPEFVGDAGGAEIKLFGKWSFDEIEVRDISLEDYIACKGDHATYLPHTAGRYQMKRFRKASCPIVERLACCLMKKGRNSGKKIMATRIVQHTLEIIHILTDQNPIQIVVDAVINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 223          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A6V2ER46_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2ER46_9STRA)

HSP 1 Score: 322 bits (826), Expect = 3.300e-109
Identity = 161/196 (82.14%), Postives = 181/196 (92.35%), Query Frame = 0
Query:   39 EEAVAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            E A A  EVKLF KW+FD+IE+RDISL DYIA KG +AT+LPHTAGRYQKKRFRKA+CPIVERL   LMRKGRN+GKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYL+ TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERV+K+NR
Sbjct:   38 EVANAGPEVKLFGKWSFDEIEVRDISLVDYIACKGDHATYLPHTAGRYQKKRFRKASCPIVERLACCLMRKGRNAGKKLMAVRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLLATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVSKSNR 233          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A2K3DQA6_CHLRE (Ribosomal_S7 domain-containing protein n=9 Tax=CS clade TaxID=2812636 RepID=A0A2K3DQA6_CHLRE)

HSP 1 Score: 321 bits (822), Expect = 3.330e-109
Identity = 156/193 (80.83%), Postives = 179/193 (92.75%), Query Frame = 0
Query:   42 VAVSEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            +A  +VKLF KW+F+DIE+ DISLEDYIAVK KYA ++PHTAGRYQK+RFRKA CPIVERLC SLM  GRN+GKKLMA RIVKH  +IIHLLTDQNP+QV+VDA+INSGPRED+TR+GSAGVVRRQAVD+SP RRVNQA+YL+TTGARE++FRNIKTIAECLADE++NAA+GSSNSYAIKKKDEIERVAKANR
Sbjct:    1 MASPDVKLFGKWSFEDIEVTDISLEDYIAVKTKYAVYVPHTAGRYQKRRFRKALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDEIERVAKANR 193          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: A0A7S4N0H9_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N0H9_9STRA)

HSP 1 Score: 322 bits (825), Expect = 4.370e-109
Identity = 159/190 (83.68%), Postives = 177/190 (93.16%), Query Frame = 0
Query:   45 SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            +EVKLF KW+FDD+E+RDISL DYIA  G +A FLPHTAGRYQKKRFRKA+CPIVERL   LM+KGRNSGKKLMA RIV+HTLEIIHLLTDQNP+QV+VDA+INSGPREDSTRVG AGVVRRQAVD+SPFRRVN ALYLI TGARE+SFRN+KT+AECLA+E+INAARGSSNSYAIKKKDEIERVAK+NR
Sbjct:   42 TEVKLFGKWSFDDVEVRDISLVDYIACTGDHAVFLPHTAGRYQKKRFRKASCPIVERLACCLMKKGRNSGKKLMACRIVQHTLEIIHLLTDQNPIQVVVDAIINSGPREDSTRVGGAGVVRRQAVDMSPFRRVNYALYLIATGAREASFRNLKTMAECLAEELINAARGSSNSYAIKKKDEIERVAKSNR 231          
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Match: F0XZC6_AURAN (Ribosomal_S7 domain-containing protein n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0XZC6_AURAN)

HSP 1 Score: 320 bits (821), Expect = 5.070e-109
Identity = 157/190 (82.63%), Postives = 176/190 (92.63%), Query Frame = 0
Query:   45 SEVKLFNKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVERLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSGPREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIAECLADEIINAARGSSNSYAIKKKDEIERVAKANR 234
            SE+KLF KWT+DD+E+ DISLEDYIAVKGK++ +LPHTAGRYQKKRFRKA CPI ERL  +LMRKGRN+GKKL A RIV+ TLEI+HLLTDQNPVQVLV A++ SGPREDSTRVGSAGVVRRQAVD+SPFRRVN ALYL+ TGARE++FRN+KTIAECLADE+INAARGSSNSYAIKKKDEIERVAKANR
Sbjct:    6 SEIKLFGKWTYDDVEVNDISLEDYIAVKGKHSVYLPHTAGRYQKKRFRKALCPITERLVCALMRKGRNNGKKLKAVRIVQSTLEIVHLLTDQNPVQVLVQAILQSGPREDSTRVGSAGVVRRQAVDMSPFRRVNMALYLLCTGAREAAFRNVKTIAECLADEVINAARGSSNSYAIKKKDEIERVAKANR 195          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1177.15.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KWT8_9PHAE8.670e-13586.86Ribosomal_S7 domain-containing protein n=2 Tax=Ect... [more]
A0A835ZGP4_9STRA3.660e-11384.97Ribosomal protein S7 domain-containing protein n=1... [more]
W7TXQ4_9STRA3.730e-11180.09Ribosomal protein S7, conserved site n=2 Tax=Monod... [more]
B8CC69_THAPS4.150e-11177.31RS5, ribosomal protein 5 n=10 Tax=Ochrophyta TaxID... [more]
D8TJL0_VOLCA9.990e-11181.87Component of cytosolic 80S ribosome and 40S small ... [more]
A0A7S3V821_9STRA4.040e-11074.88Hypothetical protein n=3 Tax=Bacillariophyta TaxID... [more]
A0A6V2ER46_9STRA3.300e-10982.14Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A2K3DQA6_CHLRE3.330e-10980.83Ribosomal_S7 domain-containing protein n=9 Tax=CS ... [more]
A0A7S4N0H9_9STRA4.370e-10983.68Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
F0XZC6_AURAN5.070e-10982.63Ribosomal_S7 domain-containing protein n=2 Tax=Pel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000235Ribosomal protein S5/S7PIRSFPIRSF002122RPS7p_RPS7a_RPS5e_RPS7ocoord: 19..234
e-value: 2.6E-41
score: 139.7
IPR000235Ribosomal protein S5/S7PANTHERPTHR11205RIBOSOMAL PROTEIN S7coord: 38..234
IPR036823Ribosomal protein S7 domain superfamilyGENE3D1.10.455.10Ribosomal protein S7 domaincoord: 29..234
e-value: 3.4E-92
score: 309.5
IPR036823Ribosomal protein S7 domain superfamilySUPERFAMILY47973Ribosomal protein S7coord: 48..234
IPR023798Ribosomal protein S7 domainPFAMPF00177Ribosomal_S7coord: 91..234
e-value: 6.6E-36
score: 123.2
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealTIGRFAMTIGR01028TIGR01028coord: 46..234
e-value: 1.9E-87
score: 289.7
IPR005716Ribosomal protein S5/S7, eukaryotic/archaealCDDcd14867uS7_Eukaryotecoord: 48..234
e-value: 3.47784E-135
score: 375.738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27
NoneNo IPR availablePANTHERPTHR11205:SF3640S RIBOSOMAL PROTEIN S5coord: 38..234
IPR020606Ribosomal protein S7, conserved sitePROSITEPS00052RIBOSOMAL_S7coord: 100..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1177contigA-nodosum_M_contig1177:187139..192151 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1177.15.1mRNA_A-nodosum_M_contig1177.15.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1177 187139..192151 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1177.15.1 ID=prot_A-nodosum_M_contig1177.15.1|Name=mRNA_A-nodosum_M_contig1177.15.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=235bp
MATELNPGGWEEGDAVPEAMEETGWGGDAEEIDASLPVEEAVAVSEVKLF
NKWTFDDIEIRDISLEDYIAVKGKYATFLPHTAGRYQKKRFRKATCPIVE
RLCVSLMRKGRNSGKKLMAARIVKHTLEIIHLLTDQNPVQVLVDAVINSG
PREDSTRVGSAGVVRRQAVDLSPFRRVNQALYLITTGARESSFRNIKTIA
ECLADEIINAARGSSNSYAIKKKDEIERVAKANR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000235Ribosomal_S5/S7
IPR036823Ribosomal_S7_dom_sf
IPR023798Ribosomal_S7_dom
IPR005716Ribosomal_S5/S7_euk/arc
IPR020606Ribosomal_S7_CS