prot_A-nodosum_M_contig1175.2.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_A-nodosum_M_contig1175.2.1
Unique Name	prot_A-nodosum_M_contig1175.2.1
Type	polypeptide
Organism	Ascophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length	162

Homology

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A6H5L3W0_9PHAE (Ubiquitin-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L3W0_9PHAE)

HSP 1 Score: 202 bits (515), Expect = 6.360e-64
Identity = 98/103 (95.15%), Postives = 102/103 (99.03%), Query Frame = 0

Query:   37 FLTGWGLPRHETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPKD 139
            FL GWGLPRHE++LDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPA+QQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGP+D
Sbjct:   48 FLPGWGLPRHESVLDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPAEQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPED 150

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A835Z7X2_9STRA (Ubiquitin-related domain-containing protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7X2_9STRA)

HSP 1 Score: 156 bits (394), Expect = 5.920e-46
Identity = 74/95 (77.89%), Postives = 85/95 (89.47%), Query Frame = 0

Query:   44 PRHETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPK 138
            P+  + L + +RLRGGMQLFVKTLTGKTV+VDV+PGDSIETLKHKIQEKEGIP DQQRIIFGGKQL G +K L DF+LE+G+TLHLVLRLRGGP+
Sbjct:   45 PQQGSALSKTLRLRGGMQLFVKTLTGKTVSVDVDPGDSIETLKHKIQEKEGIPPDQQRIIFGGKQLQGGEKTLGDFDLEDGSTLHLVLRLRGGPR 139

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A7S2XYN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYN6_9STRA)

HSP 1 Score: 126 bits (317), Expect = 3.290e-34
Identity = 60/90 (66.67%), Postives = 76/90 (84.44%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
              ++DRV+ LRGGMQ+FVKTL GKTV+V+VEPGD I+TLK KI EKEG+P DQQR+IF GKQL G  + L+D+++E+G T+HLVLRLRGG
Sbjct:   49 RAMVDRVLGLRGGMQVFVKTLNGKTVSVEVEPGDDIDTLKKKIAEKEGVPVDQQRLIFAGKQLEG--QTLADYDIEDGGTVHLVLRLRGG 136

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A6G3MKB3_HENSL (Polyubiquitin-B (Trinotate prediction) (Fragment) n=1 Tax=Henneguya salminicola TaxID=69463 RepID=A0A6G3MKB3_HENSL)

HSP 1 Score: 125 bits (315), Expect = 1.050e-33
Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
            E+ L  V+RLRGGMQ+FVKTLTGKTVT+DVEPGDS+E +K KIQ+KEGIP DQQR+IF GKQL    + L+D+ +++ +TLHLVLRLRGG
Sbjct:   64 ESTLHLVLRLRGGMQIFVKTLTGKTVTLDVEPGDSVEDIKSKIQQKEGIPTDQQRLIFAGKQLEDG-RTLNDYNIQKESTLHLVLRLRGG 152

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A0C2JX55_THEKT (Polyubiquitin n=1 Tax=Thelohanellus kitauei TaxID=669202 RepID=A0A0C2JX55_THEKT)

HSP 1 Score: 125 bits (315), Expect = 2.050e-33
Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
            E+ L  V+RLRGGMQ+FVKTLTGKT+T+DVEP DS+ET+K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG
Sbjct:   64 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPNDSVETVKSKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 152

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A0G4HF80_9ALVE (Uncharacterized protein n=2 Tax=Eukaryota TaxID=2759 RepID=A0A0G4HF80_9ALVE)

HSP 1 Score: 124 bits (310), Expect = 3.550e-33
Identity = 61/90 (67.78%), Postives = 75/90 (83.33%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
            E+ L  V+RLRGGMQ+FVKTLTGKT+T+DVEP DSIE +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG
Sbjct:   64 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIENVKAKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGG 152

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A485KBK1_9STRA (Aste57867_3872 protein n=9 Tax=Oomycota TaxID=4762 RepID=A0A485KBK1_9STRA)

HSP 1 Score: 124 bits (310), Expect = 3.550e-33
Identity = 60/90 (66.67%), Postives = 75/90 (83.33%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
            E+ L  V+RLRGGMQ+FVKTLTGKT+T+DVEP DSI+ +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG
Sbjct:   64 ESTLHLVLRLRGGMQIFVKTLTGKTITLDVEPSDSIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDG-RSLSDYNIQKESTLHLVLRLRGG 152

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A7S2V0I9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V0I9_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.870e-33
Identity = 59/84 (70.24%), Postives = 73/84 (86.90%), Query Frame = 0

Query:   53 VVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGG 136
            V+RLRGGMQ+FVKTL GKTV+V+VEPGD I+TLK KI EKEG+P DQQR+IF GKQL G  + L+D+++E+G T+HLVLRLRGG
Sbjct:   44 VLRLRGGMQVFVKTLNGKTVSVEVEPGDDIDTLKKKIAEKEGVPVDQQRLIFAGKQLEG--QTLADYDIEDGGTVHLVLRLRGG 125

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A7S3H4Z7_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H4Z7_9STRA)

HSP 1 Score: 123 bits (309), Expect = 3.980e-33
Identity = 62/95 (65.26%), Postives = 79/95 (83.16%), Query Frame = 0

Query:   44 PRHETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPK 138
            P  ++ L + + +RGGMQ+FVKTLTGKT++V+VEP +SIE+LK KIQEKEGIP  +QRIIFGGKQL  A K LSD++++E +TLHLVLRLRGG K
Sbjct:   41 PSIKSSLGKTLEIRGGMQVFVKTLTGKTISVEVEPDESIESLKAKIQEKEGIPPGEQRIIFGGKQLD-ALKSLSDYDIDEDSTLHLVLRLRGGLK 134

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BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Match: A0A0V1AQ62_TRISP (Polyubiquitin-B (Fragment) n=2 Tax=Trichinella spiralis TaxID=6334 RepID=A0A0V1AQ62_TRISP)

HSP 1 Score: 124 bits (310), Expect = 4.220e-33
Identity = 63/115 (54.78%), Postives = 85/115 (73.91%), Query Frame = 0

Query:   47 ETILDRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQRIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPKDHAL--DASLSRCSAWLSKACVN 159
            E+ L  V+RLRGGMQ+FVKTLTGKT+T++VEP D+IE +K KIQ+KEGIP DQQR+IF GKQL    + LSD+ +++ +TLHLVLRLRGG ++       ++S   +  +  CVN
Sbjct:   22 ESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDG-RTLSDYNIQKESTLHLVLRLRGGMRNFGKTDQTAISEVESSRTIGCVN 135

The following BLAST results are available for this feature:

BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot

BLAST of mRNA_A-nodosum_M_contig1175.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5L3W0_9PHAE	6.360e-64	95.15	Ubiquitin-like domain-containing protein n=2 Tax=E...	[more]
A0A835Z7X2_9STRA	5.920e-46	77.89	Ubiquitin-related domain-containing protein n=2 Ta...	[more]
A0A7S2XYN6_9STRA	3.290e-34	66.67	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A6G3MKB3_HENSL	1.050e-33	67.78	Polyubiquitin-B (Trinotate prediction) (Fragment) ...	[more]
A0A0C2JX55_THEKT	2.050e-33	67.78	Polyubiquitin n=1 Tax=Thelohanellus kitauei TaxID=...	[more]
A0A0G4HF80_9ALVE	3.550e-33	67.78	Uncharacterized protein n=2 Tax=Eukaryota TaxID=27...	[more]
A0A485KBK1_9STRA	3.550e-33	66.67	Aste57867_3872 protein n=9 Tax=Oomycota TaxID=4762...	[more]
A0A7S2V0I9_9STRA	3.870e-33	70.24	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
A0A7S3H4Z7_9STRA	3.980e-33	65.26	Hypothetical protein n=1 Tax=Spumella elongata Tax...	[more]
A0A0V1AQ62_TRISP	4.220e-33	54.78	Polyubiquitin-B (Fragment) n=2 Tax=Trichinella spi...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 70..90 score: 53.37 coord: 91..111 score: 68.88
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 60..132 e-value: 2.2E-23 score: 93.7
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 62..134 e-value: 7.5E-25 score: 86.5
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 60..136 score: 25.443764
None	No IPR available	GENE3D	3.10.20.90		coord: 52..151 e-value: 1.5E-34 score: 119.9
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 47..136
None	No IPR available	PANTHER	PTHR10666:SF238	GH17761P	coord: 47..136
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 45..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
A-nodosum_M_contig1175	contig	A-nodosum_M_contig1175:19889..37715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Ascophyllum nodosum dioecious OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_A-nodosum_M_contig1175.2.1	mRNA_A-nodosum_M_contig1175.2.1	Ascophyllum nodosum dioecious	mRNA	A-nodosum_M_contig1175 19699..37745 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_A-nodosum_M_contig1175.2.1 ID=prot_A-nodosum_M_contig1175.2.1|Name=mRNA_A-nodosum_M_contig1175.2.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=162bp
MRTAYSLVVAALATFFLLGDTSKVMAPTSPTARPRWFLTGWGLPRHETIL
DRVVRLRGGMQLFVKTLTGKTVTVDVEPGDSIETLKHKIQEKEGIPADQQ
RIIFGGKQLSGADKQLSDFELEEGNTLHLVLRLRGGPKDHALDASLSRCS
AWLSKACVNRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR019956	Ubiquitin_dom
IPR000626	Ubiquitin-like_dom
IPR029071	Ubiquitin-like_domsf