prot_A-nodosum_M_contig1167.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1167.7.1
Unique Nameprot_A-nodosum_M_contig1167.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length50
Homology
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 60.5 bits (145), Expect = 2.180e-9
Identity = 30/50 (60.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVA+GF QVEGV YT+ ++P    ASIRMLLA AA  D E+   D
Sbjct: 1026 KYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMD 1075          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK)

HSP 1 Score: 60.1 bits (144), Expect = 2.990e-9
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVAQGF QVEG+ Y E ++P   + SIR+LLA+AA  D E+   D
Sbjct: 1057 KYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMD 1106          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A146H565_MYCCL (Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H565_MYCCL)

HSP 1 Score: 58.9 bits (141), Expect = 7.640e-9
Identity = 28/50 (56.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVA+GF QV+GV Y E ++PT   ASIR++LA+AA  D ++  FD
Sbjct: 1124 KYKARLVARGFTQVQGVDYYETFAPTAKIASIRLVLAIAARNDWDIDMFD 1173          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A0C3PIV1_PISTI (Uncharacterized protein (Fragment) n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PIV1_PISTI)

HSP 1 Score: 58.5 bits (140), Expect = 1.040e-8
Identity = 28/50 (56.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            +YK RLVAQGF QVEG+ Y + ++P  T ASIR++LAMAA  + EL   D
Sbjct:  869 RYKARLVAQGFSQVEGIDYFDTFAPVATLASIRVVLAMAARSNLELHQID 918          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A7S3Y1L1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1L1_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 3.610e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RL AQG+ Q+EGV YT  +SP  ++AS+R +L +AA+ED E+   D
Sbjct:  293 KYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMD 342          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR)

HSP 1 Score: 57.0 bits (136), Expect = 3.640e-8
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK R+VA+GF QVEGV YT+ ++P    ASIR LLA+AA  D E+   D
Sbjct:  344 KYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMD 393          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A7S3Y1P1_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1P1_HETAK)

HSP 1 Score: 57.0 bits (136), Expect = 3.650e-8
Identity = 26/50 (52.00%), Postives = 36/50 (72.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RL AQG+ Q+EGV YT  +SP  ++AS+R +L +AA+ED E+   D
Sbjct:  546 KYKARLCAQGYSQIEGVDYTNTFSPVVSSASLRTVLTIAASEDMEIHCMD 595          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A8H7NTQ9_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Postia placenta TaxID=104341 RepID=A0A8H7NTQ9_9APHY)

HSP 1 Score: 57.0 bits (136), Expect = 3.650e-8
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVA+GF QVEG+ +TE ++P    AS+R LLA+AA  D E+   D
Sbjct:  686 KYKARLVAKGFTQVEGIDFTETFAPVAKFASVRTLLALAAKLDLEIHQMD 735          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A4Y9XTU1_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Fomitopsis rosea TaxID=34475 RepID=A0A4Y9XTU1_9APHY)

HSP 1 Score: 57.0 bits (136), Expect = 3.650e-8
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVA+GF QVE V Y E ++PT   ++IR LLA+AAA D E+   D
Sbjct: 1011 KYKARLVAKGFTQVEDVDYDETFAPTTKFSTIRTLLALAAAHDLEIHQMD 1060          
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Match: A0A4Z0AA04_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Z0AA04_9AGAM)

HSP 1 Score: 55.8 bits (133), Expect = 9.310e-8
Identity = 26/50 (52.00%), Postives = 34/50 (68.00%), Query Frame = 0
Query:    1 KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD 50
            KYK RLVA+GF QVEG+ + E ++P     S+RMLLA+A  ED E+   D
Sbjct:  428 KYKARLVAKGFTQVEGIDFDETFTPVVKFTSLRMLLALATKEDLEVHQMD 477          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1167.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A060SSE0_PYCCI2.180e-960.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A0C2WN23_AMAMK2.990e-956.00Integrase catalytic domain-containing protein (Fra... [more]
A0A146H565_MYCCL7.640e-956.00Polyprotein n=1 Tax=Mycena chlorophos TaxID=658473... [more]
A0A0C3PIV1_PISTI1.040e-856.00Uncharacterized protein (Fragment) n=1 Tax=Pisolit... [more]
A0A7S3Y1L1_HETAK3.610e-852.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A1C7MSU6_GRIFR3.640e-856.00Retrovirus-related Pol polyprotein from transposon... [more]
A0A7S3Y1P1_HETAK3.650e-852.00Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A8H7NTQ9_9APHY3.650e-854.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9XTU1_9APHY3.650e-856.00Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Z0AA04_9AGAM9.310e-852.00Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..50
e-value: 4.6E-11
score: 42.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1167contigA-nodosum_M_contig1167:67737..67886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1167.7.1mRNA_A-nodosum_M_contig1167.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1167 67737..67886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1167.7.1 ID=prot_A-nodosum_M_contig1167.7.1|Name=mRNA_A-nodosum_M_contig1167.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=50bp
KYKCRLVAQGFWQVEGVHYTEKYSPTPTTASIRMLLAMAAAEDGELRHFD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2