prot_A-nodosum_M_contig1163.26.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1163.26.1
Unique Nameprot_A-nodosum_M_contig1163.26.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length89
Homology
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BLAST of mRNA_A-nodosum_M_contig1163.26.1 vs. uniprot
Match: D8LBW3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBW3_ECTSI)

HSP 1 Score: 72.4 bits (176), Expect = 5.600e-13
Identity = 32/61 (52.46%), Postives = 46/61 (75.41%), Query Frame = 0 
Query:    1 MLMPVYAVFMRLLYLDVEKGSRTSVCTSTMELESLSGSDYYQPYWLPSGLTIPFEIMGPFL 61
            ++MPV+ +FMR L+L  E+GS TSV  + + LE++SGS YYQPYW+P    +PFE+ GPF+
Sbjct:  270 LVMPVFDLFMRFLFLTSEQGSYTSVRAAALPLETVSGSGYYQPYWMPFKRPLPFEVFGPFV 330
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1163.26.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LBW3_ECTSI5.600e-1352.46Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1163contigA-nodosum_M_contig1163:228610..229029 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1163.26.1mRNA_A-nodosum_M_contig1163.26.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1163 228382..229069 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1163.26.1 ID=prot_A-nodosum_M_contig1163.26.1|Name=mRNA_A-nodosum_M_contig1163.26.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=89bp
MLMPVYAVFMRLLYLDVEKGSRTSVCTSTMELESLSGSDYYQPYWLPSGL
TIPFEIMGPFLSAVHLDGRAYPRTSPPRLQECGRRVLG*
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