prot_A-nodosum_M_contig1162.29.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1162.29.1
Unique Nameprot_A-nodosum_M_contig1162.29.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length484
Homology
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI)

HSP 1 Score: 319 bits (818), Expect = 6.830e-102
Identity = 207/429 (48.25%), Postives = 243/429 (56.64%), Query Frame = 0
Query:   90 TRYTIDADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSV---------AARGGSPEEGEEGDAVEGSK---------RKTLSSDGAFG--MKDP-PSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPAS---------IPRCISYTKYGG-----------AATWKNNVSFAERDSEEFRPGLRDGKRSGFSDRKLLPVYNDAGEPQSIPDAVAAAAASYVQSARKGPAPFVPVVPA-TNFEAKYKAVGEMVYELQLTP 476
            TRYTID D+HPD A+VAVKHA QLPRFL ++PIS+HT+ AY  A  FV  FH S                                  P+  + R P PVVLDSGCGTGRS+V LARS+PHLPV+G+DRSAVRL++G    GK V         + R    E+G   D V+  +         R  L   G     +++P P NLLLLRAD +DLWILASR+ AWE+ EH ILYPNPYPKRSQLRSRWHGH VFP+LLSLGG ITLRSNW+ YL+EVCQAVLAI  A +  +GEG  A+           R  S  K G            +A     +S  E D      G   G  S    R L+   + A     +P  VAAAA SY  SAR GP  FVP VPA TNFEAKY AVGE VYEL+L P
Sbjct:    2 TRYTIDVDVHPDAASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLAFHRS----------------------------------PQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRVEEHMHQHNSSTRQAGAEQGRN-DRVDARRAHGSSGEKNRPPLQKKGNRDNRLREPLPENLLLLRADLVDLWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTEGEGDSAADEGGLGDLESKRTSSGGKDGAGEVSGTDAAVASAAVSTKLSATESDDSAETTG---GDVSFGIGRALIGDESRA----EVPATVAAAAVSYAASARAGPLTFVPAVPAATNFEAKYVAVGETVYELRLEP 388          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI001CBC5452 (SAM-dependent methyltransferase n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBC5452)

HSP 1 Score: 144 bits (362), Expect = 1.550e-36
Identity = 84/205 (40.98%), Postives = 109/205 (53.17%), Query Frame = 0
Query:  184 RRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPASIPRCIS--YTKY--GGAATWK 384
            R+  PV+LDSGCGT RS+  LA  HP   V+G+D+SA RLARG + G                                       P NLLLLRA+  D W LA  +G W ++ H +LYPNP+PK + L+ RWHGHPVFP LL+LGG + +RSNW +YL+E+ QA L  A  P   D   +PA     ++    KY   G A W+
Sbjct:   53 RQDAPVILDSGCGTARSSRWLAAQHPGAAVIGIDQSAHRLARGRDAGAL-------------------------------------PDNLLLLRAECADFWRLAE-EGGWRLMAHYLLYPNPWPKAAHLKRRWHGHPVFPSLLNLGGTLEVRSNWPIYLQEM-QAALGQAAIPSTLDE--LPADAGEAVTDFELKYLHSGHALWR 216          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI000DBA2FDA (methyltransferase domain-containing protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DBA2FDA)

HSP 1 Score: 141 bits (355), Expect = 1.450e-35
Identity = 94/258 (36.43%), Postives = 123/258 (47.67%), Query Frame = 0
Query:   96 ADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIA 353
            A IH D+  V  +H     R     P++AHTR A++ A  + R        PG+                                      P++LDSGCGTGRS+  LA+ HP   V+G+D+SA RLAR                                 S  G       P NLLLLRA+  D W LA   G W++  H +LYPNP+PK + L+ RWHGHPVFP +L+LGGR+TLRSNW +YL+E+ QA LA+A
Sbjct:   13 AGIHEDLERVVKRHLSSAWRA----PVAAHTRAAFAEADAWYR------ASPGA--------------------------------------PLILDSGCGTGRSSRLLAQRHPEARVIGLDQSAHRLAR---------------------------------SGSG-------PDNLLLLRAECADFWRLAEEAG-WQLEAHYLLYPNPWPKAAHLKRRWHGHPVFPTMLALGGRLTLRSNWGLYLQEM-QAALALA 180          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A3D9DW02_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria indalinina DSM 14324 TaxID=1122140 RepID=A0A3D9DW02_9GAMM)

HSP 1 Score: 141 bits (356), Expect = 1.490e-35
Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 0
Query:  188 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 349
            P++LD+GCGTGRS   LAR HP   VLG+DRSA RL+R                              + L   GAF     P N LL+RAD +D W LA   G W+ V H +LYPNPYPK SQL+ RWH HPVFP++++LGG +TLRSNW++Y++E   A+
Sbjct:   56 PLILDAGCGTGRSTRQLARYHPEACVLGIDRSADRLSRDYT---------------------------REL---GAF-----PDNALLVRADLVDFWRLAYSAG-WQPVRHFLLYPNPYPKASQLKRRWHAHPVFPVVMALGGVLTLRSNWQVYVDEFACAI 181          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A6N7LXP5_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Alcanivorax sediminis TaxID=2663008 RepID=A0A6N7LXP5_9GAMM)

HSP 1 Score: 141 bits (355), Expect = 1.580e-35
Identity = 85/208 (40.87%), Postives = 114/208 (54.81%), Query Frame = 0
Query:  170 AETDVKHQPRRCRGRRP----FPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEV--------CQAVLAIAPAPEDADGEGMP 365
            A+ D +   + CR R+      P++LDSGCGTGRS+V LA+SHP   V+GVD+SA RL++         A R  +P                            P NLLL+R+D   LW L    G W++  H ILYPNP+PK + L+ RWHGHPV+P +L+LGG + LRSNW++YLEEV        CQAV+      +   GEG+P
Sbjct:   36 ADFDCEAFDQACRWRQAHGPDLPLMLDSGCGTGRSSVRLAQSHPDALVIGVDQSADRLSK---------AERRFAP---------------------------LPDNLLLVRSDCAGLWRLMVEAG-WQLARHQILYPNPWPKSAHLKRRWHGHPVWPAVLALGGELELRSNWRVYLEEVRATLALSHCQAVI------QPLAGEGVP 200          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A2Z2H6M7_9GAMM (SAM-dependent methyltransferase n=1 Tax=Kushneria konosiri TaxID=698828 RepID=A0A2Z2H6M7_9GAMM)

HSP 1 Score: 141 bits (355), Expect = 1.860e-35
Identity = 74/162 (45.68%), Postives = 92/162 (56.79%), Query Frame = 0
Query:  188 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 349
            P++LD+GCGTGRS  +LA  +PH  VLG+DRSA RL+R                                   D    + D P N LL+RAD +D W LA   G W    H I YPNPYPK SQL+ RWH HPVFP++L+LGGR+ LRSNW++Y+EE   AV
Sbjct:   56 PLILDAGCGTGRSTRHLAGEYPHACVLGIDRSADRLSR-----------------------------------DYTRELGDFPDNALLVRADLVDFWRLAHLAG-WRPERHCIFYPNPYPKASQLKRRWHAHPVFPVVLALGGRLELRSNWQIYVEEFACAV 181          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: B7GB80_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GB80_PHATC)

HSP 1 Score: 144 bits (362), Expect = 2.090e-35
Identity = 121/393 (30.79%), Postives = 168/393 (42.75%), Query Frame = 0
Query:   90 TRYTIDADIHPD---VANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWE--VVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGG-RITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPASIPRCISYTKYGGAATWKNNVSFAERDSEEFRPGLRDGKRSGFSDRKLLPVYNDAGEPQSIPDAVAAAAASYVQSARKGPAPFVPVVPATNFEAKYKAVGEMVYELQLTP 476
            TRYTI +    D   +  +  KH R L RFL+  P++AHT  A+       R  H +                             D              P++LDSGCGTGRS+++L R +P   VLG+DRS  RL++  N    SVA+  G                    SD A  ++    N+ L+RA+ +D W     D  WE  + +H +LYPNPYPK+S+++SR + HP FP+LL LGG R+T+RSNW+ YL+E   AV   A                 C+S T   G            RD  + + G+  GK   ++ R L     +A     + D                      ++P TNFE KY  VGE  YEL L P
Sbjct:   49 TRYTITSCPPTDTETLRTIVEKHVRSLDRFLQAKPVAAHTLRAF-------RQVHDA--------------------------VPVDT-------------PIILDSGCGTGRSSLHLGRLYPDAVVLGIDRSVARLSKNPNFQ-SSVASDDG-------------------PSDDALLVRQAADNVWLVRAELVDFWRCCI-DAGWESSIAQHFVLYPNPYPKKSRIKSRLYAHPGFPLLLRLGGDRLTVRSNWRTYLDEFSAAVHTAAA----------------CLSTTPDDGDT----------RDEVDGKTGVY-GKN--YAQRYLASTQEEA----KLLDPT--------------------LIPWTNFEEKYHNVGERTYELVLKP 321          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI001679E76A (class I SAM-dependent methyltransferase n=1 Tax=Kushneria pakistanensis TaxID=1508770 RepID=UPI001679E76A)

HSP 1 Score: 141 bits (355), Expect = 2.510e-35
Identity = 94/258 (36.43%), Postives = 119/258 (46.12%), Query Frame = 0
Query:   92 YTIDADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 349
            Y+  A +HPD+A+    H ++        PI+ HTR A+  A  F +                           GG                    P++LD+GCGTGRS   LAR +P   VLG+DRSA RL+R                              + L   GAF     P N  LLRAD ID W LA   G W+ + H I YPNPYPK SQL+ RWH HPVFP+LL+LGG + LRSNW++Y+EE   AV
Sbjct:    9 YSTQAGLHPDLAH----HVQRALDHPWQRPIADHTRAAFETAQQFYQA-------------------------HGG--------------------PLILDAGCGTGRSTRQLARYYPKACVLGIDRSADRLSRDYT---------------------------REL---GAF-----PDNARLLRADLIDFWRLAHAAG-WQPIRHCIFYPNPYPKASQLKKRWHAHPVFPVLLALGGELELRSNWQIYVEEFACAV 181          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A1I1LSY7_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria avicenniae TaxID=402385 RepID=A0A1I1LSY7_9GAMM)

HSP 1 Score: 140 bits (354), Expect = 3.490e-35
Identity = 77/170 (45.29%), Postives = 98/170 (57.65%), Query Frame = 0
Query:  188 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVL-AIAPAP 356
            P++LD+GCGTGRS   LA  H    VLG+DRSA RL+R  +                           + L   GAF     P N LL+RAD +D W LA   G W+ + H + YPNPYPK SQL+ RWH HPVFP+LL+LGG + LRSNW++Y+EE  QA+  AI  +P
Sbjct:   56 PLILDAGCGTGRSTRQLAHHHSQACVLGIDRSADRLSRDYS---------------------------REL---GAF-----PDNALLVRADLVDFWRLAHLAG-WQPMRHCLFYPNPYPKASQLKRRWHAHPVFPVLLALGGALELRSNWRIYVEEFAQAIRQAIGQSP 189          
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A0B4XNW9_9GAMM (Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XNW9_9GAMM)

HSP 1 Score: 139 bits (350), Expect = 9.690e-35
Identity = 78/177 (44.07%), Postives = 97/177 (54.80%), Query Frame = 0
Query:  188 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVL------AIAPAPED 358
            P+VLDSGCGTGRS+V LA  +P   V+G+D+S  RL RG                                           P+NLLLLRA+A D W LA   G W V EH + YPNP+PK + LR RWHGHPVFP+LL LGG++ LRSNW +YLEE+  A+       +I+P P D
Sbjct:   58 PLVLDSGCGTGRSSVWLAGHYPEALVIGLDQSGERLRRGH------------------------------------LRFDPLPANLLLLRAEAADFWRLAVEAG-WRVREHCLFYPNPWPKSAHLRRRWHGHPVFPVLLQLGGQLRLRSNWPVYLEEMRLALALAGVTASISPLPGD 197          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FRQ6_ECTSI6.830e-10248.25Putative methyltransferase n=2 Tax=Ectocarpus TaxI... [more]
UPI001CBC54521.550e-3640.98SAM-dependent methyltransferase n=1 Tax=Alcanivora... [more]
UPI000DBA2FDA1.450e-3536.43methyltransferase domain-containing protein n=1 Ta... [more]
A0A3D9DW02_9GAMM1.490e-3546.30tRNA G46 methylase TrmB n=1 Tax=Kushneria indalini... [more]
A0A6N7LXP5_9GAMM1.580e-3540.87Methyltransferase domain-containing protein n=1 Ta... [more]
A0A2Z2H6M7_9GAMM1.860e-3545.68SAM-dependent methyltransferase n=1 Tax=Kushneria ... [more]
B7GB80_PHATC2.090e-3530.79Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
UPI001679E76A2.510e-3536.43class I SAM-dependent methyltransferase n=1 Tax=Ku... [more]
A0A1I1LSY7_9GAMM3.490e-3545.29tRNA G46 methylase TrmB n=1 Tax=Kushneria avicenni... [more]
A0A0B4XNW9_9GAMM9.690e-3544.07Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyGENE3D3.40.50.150Vaccinia Virus protein VP39coord: 164..398
e-value: 4.8E-20
score: 73.7
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilySUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 185..225
IPR003358tRNA (guanine-N-7) methyltransferase, Trmb typePFAMPF02390Methyltransf_4coord: 188..352
e-value: 7.0E-8
score: 32.1
IPR003358tRNA (guanine-N-7) methyltransferase, Trmb typePROSITEPS51625SAM_MT_TRMBcoord: 136..476
score: 20.651543
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 239..255
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 232..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1162contigA-nodosum_M_contig1162:197067..198518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1162.29.1mRNA_A-nodosum_M_contig1162.29.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1162 197034..198884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1162.29.1 ID=prot_A-nodosum_M_contig1162.29.1|Name=mRNA_A-nodosum_M_contig1162.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=484bp
MGHWGSGQSAPRLCWSRERGCRLLPPAAAAELPALRQFAACLCAHRCDSD
FHDGDSMMVSSSTDVGTVAAKADEVTAVTGATQTIRTAGTRYTIDADIHP
DVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSR
YVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRS
AVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAV
EGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAI
LYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVL
AIAPAPEDADGEGMPASIPRCISYTKYGGAATWKNNVSFAERDSEEFRPG
LRDGKRSGFSDRKLLPVYNDAGEPQSIPDAVAAAAASYVQSARKGPAPFV
PVVPATNFEAKYKAVGEMVYELQLTPSPLVEID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029063SAM-dependent_MTases_sf
IPR003358tRNA_(Gua-N-7)_MeTrfase_Trmb