mRNA_A-nodosum_M_contig1162.29.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: D7FRQ6_ECTSI (Putative methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRQ6_ECTSI) HSP 1 Score: 319 bits (817), Expect = 5.050e-100 Identity = 207/429 (48.25%), Postives = 243/429 (56.64%), Query Frame = 1
Query: 301 TRYTIDADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSV---------AARGGSPEEGEEGDAVEGSK---------RKTLSSDGAFG--MKDP-PSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPAS---------IPRCISYTKYGG-----------AATWKNNVSFAERDSEEFRPGLRDGKRSGFSDRKLLPVYNDAGEPQSIPDAVAAAAASYVQSARKGPAPFVPVVPA-TNFEAKYKAVGEMVYELQLTP 1461
TRYTID D+HPD A+VAVKHA QLPRFL ++PIS+HT+ AY A FV FH S P+ + R P PVVLDSGCGTGRS+V LARS+PHLPV+G+DRSAVRL++G GK V + R E+G D V+ + R L G +++P P NLLLLRAD +DLWILASR+ AWE+ EH ILYPNPYPKRSQLRSRWHGH VFP+LLSLGG ITLRSNW+ YL+EVCQAVLAI A + +GEG A+ R S K G +A +S E D G G S R L+ + A +P VAAAA SY SAR GP FVP VPA TNFEAKY AVGE VYEL+L P
Sbjct: 2 TRYTIDVDVHPDAASVAVKHALQLPRFLHHYPISSHTQAAYRHAVDFVLAFHRS----------------------------------PQEQQQRSPLPVVLDSGCGTGRSSVLLARSYPHLPVIGIDRSAVRLSKGGGDAGKRVEEHMHQHNSSTRQAGAEQGRN-DRVDARRAHGSSGEKNRPPLQKKGNRDNRLREPLPENLLLLRADLVDLWILASRENAWEIKEHYILYPNPYPKRSQLRSRWHGHSVFPVLLSLGGVITLRSNWRTYLDEVCQAVLAINGAAQTTEGEGDSAADEGGLGDLESKRTSSGGKDGAGEVSGTDAAVASAAVSTKLSATESDDSAETTG---GDVSFGIGRALIGDESRA----EVPATVAAAAVSYAASARAGPLTFVPAVPAATNFEAKYVAVGETVYELRLEP 388
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI001CBC5452 (SAM-dependent methyltransferase n=1 Tax=Alcanivorax limicola TaxID=2874102 RepID=UPI001CBC5452) HSP 1 Score: 144 bits (362), Expect = 8.250e-36 Identity = 84/205 (40.98%), Postives = 109/205 (53.17%), Query Frame = 1
Query: 583 RRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPASIPRCIS--YTKY--GGAATWK 1185
R+ PV+LDSGCGT RS+ LA HP V+G+D+SA RLARG + G P NLLLLRA+ D W LA +G W ++ H +LYPNP+PK + L+ RWHGHPVFP LL+LGG + +RSNW +YL+E+ QA L A P D +PA ++ KY G A W+
Sbjct: 53 RQDAPVILDSGCGTARSSRWLAAQHPGAAVIGIDQSAHRLARGRDAGAL-------------------------------------PDNLLLLRAECADFWRLAE-EGGWRLMAHYLLYPNPWPKAAHLKRRWHGHPVFPSLLNLGGTLEVRSNWPIYLQEM-QAALGQAAIPSTLDE--LPADAGEAVTDFELKYLHSGHALWR 216
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI000DBA2FDA (methyltransferase domain-containing protein n=1 Tax=Alcanivorax indicus TaxID=2202653 RepID=UPI000DBA2FDA) HSP 1 Score: 141 bits (355), Expect = 7.190e-35 Identity = 94/258 (36.43%), Postives = 123/258 (47.67%), Query Frame = 1
Query: 319 ADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVLAIA 1092
A IH D+ V +H R P++AHTR A++ A + R PG+ P++LDSGCGTGRS+ LA+ HP V+G+D+SA RLAR S G P NLLLLRA+ D W LA G W++ H +LYPNP+PK + L+ RWHGHPVFP +L+LGGR+TLRSNW +YL+E+ QA LA+A
Sbjct: 13 AGIHEDLERVVKRHLSSAWRA----PVAAHTRAAFAEADAWYR------ASPGA--------------------------------------PLILDSGCGTGRSSRLLAQRHPEARVIGLDQSAHRLAR---------------------------------SGSG-------PDNLLLLRAECADFWRLAEEAG-WQLEAHYLLYPNPWPKAAHLKRRWHGHPVFPTMLALGGRLTLRSNWGLYLQEM-QAALALA 180
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A3D9DW02_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria indalinina DSM 14324 TaxID=1122140 RepID=A0A3D9DW02_9GAMM) HSP 1 Score: 141 bits (356), Expect = 7.470e-35 Identity = 75/162 (46.30%), Postives = 96/162 (59.26%), Query Frame = 1
Query: 595 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 1080
P++LD+GCGTGRS LAR HP VLG+DRSA RL+R + L GAF P N LL+RAD +D W LA G W+ V H +LYPNPYPK SQL+ RWH HPVFP++++LGG +TLRSNW++Y++E A+
Sbjct: 56 PLILDAGCGTGRSTRQLARYHPEACVLGIDRSADRLSRDYT---------------------------REL---GAF-----PDNALLVRADLVDFWRLAYSAG-WQPVRHFLLYPNPYPKASQLKRRWHAHPVFPVVMALGGVLTLRSNWQVYVDEFACAI 181
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A6N7LXP5_9GAMM (Methyltransferase domain-containing protein n=1 Tax=Alcanivorax sediminis TaxID=2663008 RepID=A0A6N7LXP5_9GAMM) HSP 1 Score: 141 bits (355), Expect = 7.820e-35 Identity = 85/208 (40.87%), Postives = 114/208 (54.81%), Query Frame = 1
Query: 541 AETDVKHQPRRCRGRRP----FPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEV--------CQAVLAIAPAPEDADGEGMP 1128
A+ D + + CR R+ P++LDSGCGTGRS+V LA+SHP V+GVD+SA RL++ A R +P P NLLL+R+D LW L G W++ H ILYPNP+PK + L+ RWHGHPV+P +L+LGG + LRSNW++YLEEV CQAV+ + GEG+P
Sbjct: 36 ADFDCEAFDQACRWRQAHGPDLPLMLDSGCGTGRSSVRLAQSHPDALVIGVDQSADRLSK---------AERRFAP---------------------------LPDNLLLVRSDCAGLWRLMVEAG-WQLARHQILYPNPWPKSAHLKRRWHGHPVWPAVLALGGELELRSNWRVYLEEVRATLALSHCQAVI------QPLAGEGVP 200
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A2Z2H6M7_9GAMM (SAM-dependent methyltransferase n=1 Tax=Kushneria konosiri TaxID=698828 RepID=A0A2Z2H6M7_9GAMM) HSP 1 Score: 141 bits (355), Expect = 9.230e-35 Identity = 74/162 (45.68%), Postives = 92/162 (56.79%), Query Frame = 1
Query: 595 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 1080
P++LD+GCGTGRS +LA +PH VLG+DRSA RL+R D + D P N LL+RAD +D W LA G W H I YPNPYPK SQL+ RWH HPVFP++L+LGGR+ LRSNW++Y+EE AV
Sbjct: 56 PLILDAGCGTGRSTRHLAGEYPHACVLGIDRSADRLSR-----------------------------------DYTRELGDFPDNALLVRADLVDFWRLAHLAG-WRPERHCIFYPNPYPKASQLKRRWHAHPVFPVVLALGGRLELRSNWQIYVEEFACAV 181
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: UPI001679E76A (class I SAM-dependent methyltransferase n=1 Tax=Kushneria pakistanensis TaxID=1508770 RepID=UPI001679E76A) HSP 1 Score: 141 bits (355), Expect = 1.250e-34 Identity = 94/258 (36.43%), Postives = 119/258 (46.12%), Query Frame = 1
Query: 307 YTIDADIHPDVANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAV 1080
Y+ A +HPD+A+ H ++ PI+ HTR A+ A F + GG P++LD+GCGTGRS LAR +P VLG+DRSA RL+R + L GAF P N LLRAD ID W LA G W+ + H I YPNPYPK SQL+ RWH HPVFP+LL+LGG + LRSNW++Y+EE AV
Sbjct: 9 YSTQAGLHPDLAH----HVQRALDHPWQRPIADHTRAAFETAQQFYQA-------------------------HGG--------------------PLILDAGCGTGRSTRQLARYYPKACVLGIDRSADRLSRDYT---------------------------REL---GAF-----PDNARLLRADLIDFWRLAHAAG-WQPIRHCIFYPNPYPKASQLKKRWHAHPVFPVLLALGGELELRSNWQIYVEEFACAV 181
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: B7GB80_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GB80_PHATC) HSP 1 Score: 143 bits (361), Expect = 1.540e-34 Identity = 121/393 (30.79%), Postives = 168/393 (42.75%), Query Frame = 1
Query: 301 TRYTIDADIHPD---VANVAVKHARQLPRFLENHPISAHTREAYSLAATFVRDFHLSRRDPGSRYVFGEAKAGSDEEEFGGGDAETDVKHQPRRCRGRRPFPVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWE--VVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGG-RITLRSNWKMYLEEVCQAVLAIAPAPEDADGEGMPASIPRCISYTKYGGAATWKNNVSFAERDSEEFRPGLRDGKRSGFSDRKLLPVYNDAGEPQSIPDAVAAAAASYVQSARKGPAPFVPVVPATNFEAKYKAVGEMVYELQLTP 1461
TRYTI + D + + KH R L RFL+ P++AHT A+ R H + D P++LDSGCGTGRS+++L R +P VLG+DRS RL++ N SVA+ G SD A ++ N+ L+RA+ +D W D WE + +H +LYPNPYPK+S+++SR + HP FP+LL LGG R+T+RSNW+ YL+E AV A C+S T G RD + + G+ GK ++ R L +A + D ++P TNFE KY VGE YEL L P
Sbjct: 49 TRYTITSCPPTDTETLRTIVEKHVRSLDRFLQAKPVAAHTLRAF-------RQVHDA--------------------------VPVDT-------------PIILDSGCGTGRSSLHLGRLYPDAVVLGIDRSVARLSKNPNFQ-SSVASDDG-------------------PSDDALLVRQAADNVWLVRAELVDFWRCCI-DAGWESSIAQHFVLYPNPYPKKSRIKSRLYAHPGFPLLLRLGGDRLTVRSNWRTYLDEFSAAVHTAAA----------------CLSTTPDDGDT----------RDEVDGKTGVY-GKN--YAQRYLASTQEEA----KLLDPT--------------------LIPWTNFEEKYHNVGERTYELVLKP 321
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A1I1LSY7_9GAMM (tRNA G46 methylase TrmB n=1 Tax=Kushneria avicenniae TaxID=402385 RepID=A0A1I1LSY7_9GAMM) HSP 1 Score: 140 bits (354), Expect = 1.720e-34 Identity = 77/170 (45.29%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 595 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVL-AIAPAP 1101
P++LD+GCGTGRS LA H VLG+DRSA RL+R + + L GAF P N LL+RAD +D W LA G W+ + H + YPNPYPK SQL+ RWH HPVFP+LL+LGG + LRSNW++Y+EE QA+ AI +P
Sbjct: 56 PLILDAGCGTGRSTRQLAHHHSQACVLGIDRSADRLSRDYS---------------------------REL---GAF-----PDNALLVRADLVDFWRLAHLAG-WQPMRHCLFYPNPYPKASQLKRRWHAHPVFPVLLALGGALELRSNWRIYVEEFAQAIRQAIGQSP 189
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Match: A0A0B4XNW9_9GAMM (Methyltransferase n=2 Tax=Alcanivorax TaxID=59753 RepID=A0A0B4XNW9_9GAMM) HSP 1 Score: 139 bits (350), Expect = 4.580e-34 Identity = 78/177 (44.07%), Postives = 97/177 (54.80%), Query Frame = 1
Query: 595 PVVLDSGCGTGRSAVNLARSHPHLPVLGVDRSAVRLARGMNIGGKSVAARGGSPEEGEEGDAVEGSKRKTLSSDGAFGMKDPPSNLLLLRADAIDLWILASRDGAWEVVEHAILYPNPYPKRSQLRSRWHGHPVFPILLSLGGRITLRSNWKMYLEEVCQAVL------AIAPAPED 1107
P+VLDSGCGTGRS+V LA +P V+G+D+S RL RG P+NLLLLRA+A D W LA G W V EH + YPNP+PK + LR RWHGHPVFP+LL LGG++ LRSNW +YLEE+ A+ +I+P P D
Sbjct: 58 PLVLDSGCGTGRSSVWLAGHYPEALVIGLDQSGERLRRGH------------------------------------LRFDPLPANLLLLRAEAADFWRLAVEAG-WRVREHCLFYPNPWPKSAHLRRRWHGHPVFPVLLQLGGQLRLRSNWPVYLEEMRLALALAGVTASISPLPGD 197 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1162.29.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1162.29.1 >prot_A-nodosum_M_contig1162.29.1 ID=prot_A-nodosum_M_contig1162.29.1|Name=mRNA_A-nodosum_M_contig1162.29.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=484bp MGHWGSGQSAPRLCWSRERGCRLLPPAAAAELPALRQFAACLCAHRCDSDback to top mRNA from alignment at A-nodosum_M_contig1162:197034..198884+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1162.29.1 ID=mRNA_A-nodosum_M_contig1162.29.1|Name=mRNA_A-nodosum_M_contig1162.29.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=1851bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:197034..198884+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1162:197034..198884+ >mRNA_A-nodosum_M_contig1162.29.1 ID=mRNA_A-nodosum_M_contig1162.29.1|Name=mRNA_A-nodosum_M_contig1162.29.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=1452bp|location=Sequence derived from alignment at A-nodosum_M_contig1162:197034..198884+ (Ascophyllum nodosum dioecious)back to top |