prot_A-nodosum_M_contig11607.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11607.1.1
Unique Nameprot_A-nodosum_M_contig11607.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length83
Homology
[Close]
BLAST of mRNA_A-nodosum_M_contig11607.1.1 vs. uniprot
Match: A0A6H5KVU5_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVU5_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 3.980e-13
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0 
Query:   36 EAFGTNASKAACKNTAARQVIDAVKKVVEHLNKSNVMKVKYEDMQHLM 83
            EAFGTNAS+AACKN  ARQVID VKKVVEHLNKS +MK +Y+D+Q L+
Sbjct:  357 EAFGTNASRAACKNLGARQVIDTVKKVVEHLNKSTLMKARYDDIQVLL 404
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11607.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KVU5_9PHAE3.980e-1375.00Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ec... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11607contigA-nodosum_M_contig11607:7239..9252 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11607.1.1mRNA_A-nodosum_M_contig11607.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11607 7149..9252 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11607.1.1 ID=prot_A-nodosum_M_contig11607.1.1|Name=mRNA_A-nodosum_M_contig11607.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=83bp
MASVDNSIGGAAGDASSGQEPIDVEPGSSPSPMDNEAFGTNASKAACKNT
AARQVIDAVKKVVEHLNKSNVMKVKYEDMQHLM
back to top