prot_A-nodosum_M_contig1156.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1156.7.1
Unique Nameprot_A-nodosum_M_contig1156.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length155
Homology
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BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.370e-18
Identity = 59/130 (45.38%), Postives = 79/130 (60.77%), Query Frame = 0 
Query:    2 TEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPG----RASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYD 127
            TE  S L+CQG L  K++FKPS + SKAHR+L LAVR R  K S I  Y+ET+DPE VK +R R +E   K+ +RR    A +P  +R G    RA M   YLE G     +D T ++++K D++  RYD
Sbjct:  214 TEGTSCLECQGRLDNKLTFKPSGLHSKAHRSLALAVRTRTQKASRIMSYSETMDPEAVKTQRVRTEEGTRKREKRRTSGAAGYP-RYRDGARGKRARMSATYLEEGV---DYDETGLKSLKEDTR-NRYD 338
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CAV3_9STRA1.370e-1845.38Leo1-like protein-domain-containing protein n=1 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 57..84
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 68..88
IPR007149Leo1-like proteinPFAMPF04004Leo1coord: 3..63
e-value: 4.8E-12
score: 46.0
IPR007149Leo1-like proteinPANTHERPTHR23146LEO1 PROTEINcoord: 4..121

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1156contigA-nodosum_M_contig1156:50891..52135 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1156.7.1mRNA_A-nodosum_M_contig1156.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1156 49490..52594 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1156.7.1 ID=prot_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=155bp
MTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKY
AETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRASMDIGYL
EAGAASGTFDSTSMRAIKSDSKAGRYDDMLYVLYCKQLCTHPTLFTVSKR
KMVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007149Leo1