mRNA_A-nodosum_M_contig1156.7.1 (mRNA) Ascophyllum nodosum dioecious
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Overview
Homology
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA) HSP 1 Score: 224 bits (572), Expect = 7.070e-65 Identity = 129/255 (50.59%), Postives = 169/255 (66.27%), Query Frame = 3
Query: 141 LRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTTNIIR----------WRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEG-SVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPG----RASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYD 860
+ IP L RP P + V +TR+PN++GIKT FDP+TF++ AE FKFTTNIIR WR+++D+ G LE E G P+RETNTRLVKWSDGS QL+VG+E FDV EH +D+S +FV+Q T EG S L+CQG L K++FKPS + SKAHR+L LAVR R K S I Y+ET+DPE VK +R R +E K+ +RR A +P +R G RA M YLE G +D T ++++K D++ RYD
Sbjct: 89 IEIPELQRPTPASKVYVTRMPNVMGIKTAPFDPNTFDQVAEDETFKFTTNIIRQAYFNSLTLEWRHRKDASGALEYDEHGEPIRETNTRLVKWSDGSLQLMVGEEVFDVSEHALDKSYMFVRQKTTEGTSCLECQGRLDNKLTFKPSGLHSKAHRSLALAVRTRTQKASRIMSYSETMDPEAVKTQRVRTEEGTRKREKRRTSGAAGYP-RYRDGARGKRARMSATYLEEGV---DYDETGLKSLKEDTR-NRYD 338
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: D7FUQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ9_ECTSI) HSP 1 Score: 132 bits (333), Expect = 1.470e-31 Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 3
Query: 147 IPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVK 386
IPVLPRPP ADV I+RLPNILG+KTEAFDPDT+EEEAEA EFKFTTNIIRWR+KR +LGR ELG+DG LRE+NTRLVK
Sbjct: 59 IPVLPRPPAEADVMISRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIRWRHKRGNLGRPELGDDGRALRESNTRLVK 138
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A448YW85_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW85_9STRA) HSP 1 Score: 132 bits (333), Expect = 1.620e-30 Identity = 97/268 (36.19%), Postives = 144/268 (53.73%), Query Frame = 3
Query: 147 IPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFK-FTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDV----------------------------GEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQE-AENKQLRRRNREYARHPGDWRPGRASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYD 860
+P +P G + +T+LPN++ I+ AFD ++E+ E +K + N+IRWRYK+D G E GL +RE+NT+LVKWSDGS L +G E+FD+ E+ D D + G+VL+C G + + KPS++ S++H++LT+AVR+R VK + I +Y DPEK+KQER + E A + R+R G RPG M+ GYLEA G +D+ ++RA+K S A YD
Sbjct: 143 VPSAGKPQEGCSLHMTKLPNVVAIQPSAFDEVDYDEKEEEETYKGYVHNMIRWRYKKDDNGNPMRDERGL-IRESNTKLVKWSDGSFTLHIGKEAFDIQNVDSSTGSGFSGLNGYVYQSQKATFQTDENDSDNDD--EDDLQNGGTVLECIGPVGSRFVAKPSSLQSESHKSLTVAVRQRTVKRAKIAQYMTEEDPEKLKQERIKYNEDAXXXKQRKRATGGGSRGGGRRPG---MNKGYLEADDDEG-YDTVNLRAMKKAS-ASNYD 402
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A1W0A835_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A835_9STRA) HSP 1 Score: 125 bits (315), Expect = 1.370e-28 Identity = 80/236 (33.90%), Postives = 136/236 (57.63%), Query Frame = 3
Query: 138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELGED-GLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIK 833
EL+IP P+ + TR PNIL EA+ + ++E E + N +RWRY D+ G +++ + GLP RE+NTR+VKW DG+ + VG+E+ + + + S +FV + + + +VL+C G ++ K++ +P+ S +H++LT+++R R KG I++Y ID K++RA ++ +Q+R NR+ R D+ R+S MD G+LE G +D ++ AIK
Sbjct: 77 ELQIPKAPKAKMNTEYFFTRPPNILRFVPEAYTKSSIQKEKEETGDEGLYRNYVRWRYATDANGNVQIDSNTGLPKRESNTRIVKWEDGTYTMFVGEEALTLTKQKVANSFIFVNEQSTDETVLECHGRVAHKLTIRPNATTSSSHQSLTMSMRARHNKGVVRIQEYVSEIDGTLEKEKRAAVRQ---EQMRLVNRKKQREGYDYDRDRSSRMDAGFLEEGYDGVEYDDDNLSAIK 309
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A7S2XRE6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE6_9STRA) HSP 1 Score: 127 bits (318), Expect = 3.150e-28 Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 3
Query: 126 LPDRELRIPVLPRPPPGADVA------ITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTT-NIIRWRYKRDSLGRLELGEDGLPLR---------ETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSD--------LFVQQM--------------TEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRR---NREYARHPGDWRPG-------RASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYDD 863
+P R+ VL P P A A +T+LPN++GI E FDPDTF+ + E E++ N+IRWRYKR +DG LR E+N+R V+WSDGS L VG+E F+V EH + L++ Q T G+VL+C G +S K+ +PS++ S+AH+ LTLAVR+R +K + I+++ +DPEK K ER + ++ KQ R R R G++ G R M+ YLE+ +D+ +R +K S+ Y D
Sbjct: 149 VPKEPRRLEVLDMPRPEATRAHKTTLHMTKLPNLVGINPEPFDPDTFDADLEETEYRGNVHNMIRWRYKRSQ-------DDGTMLRDPQTNKLQRESNSRFVRWSDGSVTLHVGNEVFEVDEHDSSTKNGFAGINGYLYLSQKAHTMGGGEGDNHDKTPAGTVLECMGPISSKMIPRPSSLKSEAHKNLTLAVRQRNMKKARIEEHVTQVDPEKEKLERIKNKDDLLKQEARGVSGRRGAGRRSGEYNNGNSNSNNRRPGMNRRYLESNEDE-NYDNIDIRQLKRRSQEDEYLD 434
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: B7FUI2_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUI2_PHATC) HSP 1 Score: 124 bits (310), Expect = 1.530e-27 Identity = 80/248 (32.26%), Postives = 139/248 (56.05%), Query Frame = 3
Query: 189 ITRLPNILGIKTEAFDPDTFEEEAEAAEF-KFTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHP------------IDRSDLFVQQMTEE-----GSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRASMDIGYLEAGAASGTFDSTSMRAIK-----SDSKAGRYDD 863
+T+LPN++GI+T+AFDPDT+ E +F + N++RWRY++D G E LRE+N+RLV+W DGS L +G+E+F++ I R+ V + ++ G+VL+C G ++ +++ +PS++ S+AH++LT+ +R++ +K + I +Y DPEK KQ+R + ++ K R+ Y++ G R R M YLE G +D+ +++ K +D + Y D
Sbjct: 137 MTKLPNLVGIQTQAFDPDTYHPAMEEDDFGQSVYNLVRWRYRKDDTGNYVRDEQDRLLRESNSRLVQWEDGSYTLHIGNEAFEIDALKTAANGFPGLNGFIYRTQKAVLKTADDNERAAGTVLECVGAVATRMTIRPSSLQSEAHKSLTVGIRQKTMKKARIAEYVTQEDPEKAKQDRIKVKQDLEKVSARKRSGYSQAGG--RTARPRMSRSYLEE-EEDGDYDTFNIKDTKRRIRDADEELKEYGD 381
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: W4GIC3_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIC3_9STRA) HSP 1 Score: 122 bits (305), Expect = 5.980e-27 Identity = 81/241 (33.61%), Postives = 136/241 (56.43%), Query Frame = 3
Query: 138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIKSDSKA 848
ELRIP P+ P ++ TR PN+L +AF ++ ++E E + N +RWRYK D+ GR+ + + GLP+RETN R+VKW DGS + VGDE + + + S +FV + + + +VL+C G + K++ +P + S +H++L +++R R K I++Y ID K++RA ++ +Q++ NR+ R ++ R+S +D +LE G D ++ AIK KA
Sbjct: 117 ELRIPKGPKAPKKTNLFFTRPPNVLRFVPDAFTTESIKKEKEETGDEGIYRNFVRWRYKLDAGGRIMVDPKTGLPMRETNARIVKWEDGSYTMCVGDEVLTLTQQKVANSFVFVNEQSTDETVLECHGRVKSKMTIRPISTASTSHQSLKMSMRARHNKAVVRIQEYVSEIDGTLDKEQRAAVKQ---EQMKLENRKKQRQGYEYDRDRSSRLDSTFLEEGYDGMDDDXXNLSAIKQQYKA 354
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A6G0WUF6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUF6_9STRA) HSP 1 Score: 121 bits (303), Expect = 1.010e-26 Identity = 76/236 (32.20%), Postives = 137/236 (58.05%), Query Frame = 3
Query: 138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIK 833
EL+IP P+ P G+++ TR PN+L +AF ++ ++E E + N +RWRYK D GR+ + + GLP+RE+N+R+VKW DGS + VG E+ + + + S +FV + + + +VL+C G + K++ +P + S +H++L +++R R K I++Y +D K+++A ++ +Q+R NR+ R ++ R+S +D +LE G +D ++ AIK
Sbjct: 115 ELQIPKGPKAPRGSELFFTRPPNVLRFVPDAFTSESIKKEKEETGDEGIYRNYVRWRYKLDGNGRIMVDPKSGLPVRESNSRIVKWDDGSYTMFVGGEALTLTQQRVANSFVFVNEQSTDETVLECHGRVQSKLTIRPISTQSSSHQSLKMSMRARHNKAVVKIQEYISEVDGTLDKEQKAAIKQ---EQMRLENRKKQRQGYEYDRDRSSRLDSNFLEEGYDGVEYDDNNLSAIK 347
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A8K1CLR2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLR2_PYTOL) HSP 1 Score: 121 bits (304), Expect = 1.380e-26 Identity = 79/241 (32.78%), Postives = 134/241 (55.60%), Query Frame = 3
Query: 138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEG-------------SVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKG-STIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFD 809
E+ +P P+ P A I ++PNIL + EA+ +EE E ++ N +RWRY+RD G++++ + PLRE+NT+LV+W DG+ + VG E+ + I S LFV +++ + +VL+C G L +K + +P SK+H++LT+++R + KG IK Y +D E+ +++RA+ + +LR +NR+ AR ++ R+S MD +LE G G +D
Sbjct: 136 EIWLPKTPKAPKSAQYYICKMPNILRLVPEAYTKQAIQEEMENPSDEMLYRNYVRWRYQRDDDGKVKIDPQTKRPLRESNTKLVQWEDGTLTMFVGKEALSLSRQKIPNSFLFVNEISSDKPVADEDPDAPGQETVLECHGRLKEKFTIRPMTTSSKSHKSLTMSMRAKHNKGVQKIKHYISELDGEREQEQRAKINDD---RLRLQNRKKARQTYEYDRERSSRMDANFLEEGYDGGDYD 373
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A024T9K4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9K4_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.020e-25 Identity = 75/221 (33.94%), Postives = 128/221 (57.92%), Query Frame = 3
Query: 138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAG 788
EL IP P+ P ++ TR PN+L +AF ++ ++E E + N +RWRYK D+ GR+ + + GLP+RETN+R+VKW DGS + VGDE + + + S +FV + + + +VL+C G + K++ +P + S +H++L +++R R K I++Y ID K++RA ++ +Q+R NR+ R ++ R+S +D +LE G
Sbjct: 122 ELSIPKGPKAPKKTNLFFTRPPNVLRFVPDAFTTESIKKEKEETGDEGIYRNYVRWRYKLDASGRIMVDPKTGLPMRETNSRIVKWEDGSFTMCVGDEVLTLTQQKVANSFVFVNEQSTDETVLECHGRVKSKLTIRPISTASSSHQSLKMSMRARHNKAVVRIQEYVSEIDGTLDKEQRAAVKQ---EQMRLENRKKQRQGYEYDRDRSSRLDSSFLEEG 339 The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_A-nodosum_M_contig1156.7.1 >prot_A-nodosum_M_contig1156.7.1 ID=prot_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=155bp MTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYback to top mRNA from alignment at A-nodosum_M_contig1156:49490..52594+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_A-nodosum_M_contig1156.7.1 ID=mRNA_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3105bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:49490..52594+ (Ascophyllum nodosum dioecious)back to top Coding sequence (CDS) from alignment at A-nodosum_M_contig1156:49490..52594+ >mRNA_A-nodosum_M_contig1156.7.1 ID=mRNA_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=465bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:49490..52594+ (Ascophyllum nodosum dioecious)back to top |