mRNA_A-nodosum_M_contig1156.7.1 (mRNA) Ascophyllum nodosum dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_A-nodosum_M_contig1156.7.1
Unique NamemRNA_A-nodosum_M_contig1156.7.1
TypemRNA
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Homology
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A836CAV3_9STRA (Leo1-like protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV3_9STRA)

HSP 1 Score: 224 bits (572), Expect = 7.070e-65
Identity = 129/255 (50.59%), Postives = 169/255 (66.27%), Query Frame = 3
Query:  141 LRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTTNIIR----------WRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEG-SVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPG----RASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYD 860
            + IP L RP P + V +TR+PN++GIKT  FDP+TF++ AE   FKFTTNIIR          WR+++D+ G LE  E G P+RETNTRLVKWSDGS QL+VG+E FDV EH +D+S +FV+Q T EG S L+CQG L  K++FKPS + SKAHR+L LAVR R  K S I  Y+ET+DPE VK +R R +E   K+ +RR    A +P  +R G    RA M   YLE G     +D T ++++K D++  RYD
Sbjct:   89 IEIPELQRPTPASKVYVTRMPNVMGIKTAPFDPNTFDQVAEDETFKFTTNIIRQAYFNSLTLEWRHRKDASGALEYDEHGEPIRETNTRLVKWSDGSLQLMVGEEVFDVSEHALDKSYMFVRQKTTEGTSCLECQGRLDNKLTFKPSGLHSKAHRSLALAVRTRTQKASRIMSYSETMDPEAVKTQRVRTEEGTRKREKRRTSGAAGYP-RYRDGARGKRARMSATYLEEGV---DYDETGLKSLKEDTR-NRYD 338          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: D7FUQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUQ9_ECTSI)

HSP 1 Score: 132 bits (333), Expect = 1.470e-31
Identity = 65/80 (81.25%), Postives = 72/80 (90.00%), Query Frame = 3
Query:  147 IPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVK 386
            IPVLPRPP  ADV I+RLPNILG+KTEAFDPDT+EEEAEA EFKFTTNIIRWR+KR +LGR ELG+DG  LRE+NTRLVK
Sbjct:   59 IPVLPRPPAEADVMISRLPNILGVKTEAFDPDTYEEEAEADEFKFTTNIIRWRHKRGNLGRPELGDDGRALRESNTRLVK 138          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A448YW85_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YW85_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.620e-30
Identity = 97/268 (36.19%), Postives = 144/268 (53.73%), Query Frame = 3
Query:  147 IPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAEAAEFK-FTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDV----------------------------GEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQE-AENKQLRRRNREYARHPGDWRPGRASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYD 860
            +P   +P  G  + +T+LPN++ I+  AFD   ++E+ E   +K +  N+IRWRYK+D  G     E GL +RE+NT+LVKWSDGS  L +G E+FD+                             E+  D  D     +   G+VL+C G +  +   KPS++ S++H++LT+AVR+R VK + I +Y    DPEK+KQER +  E A   + R+R        G  RPG   M+ GYLEA    G +D+ ++RA+K  S A  YD
Sbjct:  143 VPSAGKPQEGCSLHMTKLPNVVAIQPSAFDEVDYDEKEEEETYKGYVHNMIRWRYKKDDNGNPMRDERGL-IRESNTKLVKWSDGSFTLHIGKEAFDIQNVDSSTGSGFSGLNGYVYQSQKATFQTDENDSDNDD--EDDLQNGGTVLECIGPVGSRFVAKPSSLQSESHKSLTVAVRQRTVKRAKIAQYMTEEDPEKLKQERIKYNEDAXXXKQRKRATGGGSRGGGRRPG---MNKGYLEADDDEG-YDTVNLRAMKKAS-ASNYD 402          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A1W0A835_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A835_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.370e-28
Identity = 80/236 (33.90%), Postives = 136/236 (57.63%), Query Frame = 3
Query:  138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELGED-GLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIK 833
            EL+IP  P+     +   TR PNIL    EA+   + ++E E   +     N +RWRY  D+ G +++  + GLP RE+NTR+VKW DG+  + VG+E+  + +  +  S +FV + + + +VL+C G ++ K++ +P+   S +H++LT+++R R  KG   I++Y   ID    K++RA  ++   +Q+R  NR+  R   D+   R+S MD G+LE G     +D  ++ AIK
Sbjct:   77 ELQIPKAPKAKMNTEYFFTRPPNILRFVPEAYTKSSIQKEKEETGDEGLYRNYVRWRYATDANGNVQIDSNTGLPKRESNTRIVKWEDGTYTMFVGEEALTLTKQKVANSFIFVNEQSTDETVLECHGRVAHKLTIRPNATTSSSHQSLTMSMRARHNKGVVRIQEYVSEIDGTLEKEKRAAVRQ---EQMRLVNRKKQREGYDYDRDRSSRMDAGFLEEGYDGVEYDDDNLSAIK 309          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A7S2XRE6_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XRE6_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.150e-28
Identity = 101/294 (34.35%), Postives = 149/294 (50.68%), Query Frame = 3
Query:  126 LPDRELRIPVLPRPPPGADVA------ITRLPNILGIKTEAFDPDTFEEEAEAAEFKFTT-NIIRWRYKRDSLGRLELGEDGLPLR---------ETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSD--------LFVQQM--------------TEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRR---NREYARHPGDWRPG-------RASMDIGYLEAGAASGTFDSTSMRAIKSDSKAGRYDD 863
            +P    R+ VL  P P A  A      +T+LPN++GI  E FDPDTF+ + E  E++    N+IRWRYKR         +DG  LR         E+N+R V+WSDGS  L VG+E F+V EH     +        L++ Q               T  G+VL+C G +S K+  +PS++ S+AH+ LTLAVR+R +K + I+++   +DPEK K ER + ++   KQ  R     R   R  G++  G       R  M+  YLE+      +D+  +R +K  S+   Y D
Sbjct:  149 VPKEPRRLEVLDMPRPEATRAHKTTLHMTKLPNLVGINPEPFDPDTFDADLEETEYRGNVHNMIRWRYKRSQ-------DDGTMLRDPQTNKLQRESNSRFVRWSDGSVTLHVGNEVFEVDEHDSSTKNGFAGINGYLYLSQKAHTMGGGEGDNHDKTPAGTVLECMGPISSKMIPRPSSLKSEAHKNLTLAVRQRNMKKARIEEHVTQVDPEKEKLERIKNKDDLLKQEARGVSGRRGAGRRSGEYNNGNSNSNNRRPGMNRRYLESNEDE-NYDNIDIRQLKRRSQEDEYLD 434          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: B7FUI2_PHATC (Predicted protein (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUI2_PHATC)

HSP 1 Score: 124 bits (310), Expect = 1.530e-27
Identity = 80/248 (32.26%), Postives = 139/248 (56.05%), Query Frame = 3
Query:  189 ITRLPNILGIKTEAFDPDTFEEEAEAAEF-KFTTNIIRWRYKRDSLGRLELGEDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHP------------IDRSDLFVQQMTEE-----GSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRASMDIGYLEAGAASGTFDSTSMRAIK-----SDSKAGRYDD 863
            +T+LPN++GI+T+AFDPDT+    E  +F +   N++RWRY++D  G     E    LRE+N+RLV+W DGS  L +G+E+F++                I R+   V +  ++     G+VL+C G ++ +++ +PS++ S+AH++LT+ +R++ +K + I +Y    DPEK KQ+R + ++   K   R+   Y++  G  R  R  M   YLE     G +D+ +++  K     +D +   Y D
Sbjct:  137 MTKLPNLVGIQTQAFDPDTYHPAMEEDDFGQSVYNLVRWRYRKDDTGNYVRDEQDRLLRESNSRLVQWEDGSYTLHIGNEAFEIDALKTAANGFPGLNGFIYRTQKAVLKTADDNERAAGTVLECVGAVATRMTIRPSSLQSEAHKSLTVGIRQKTMKKARIAEYVTQEDPEKAKQDRIKVKQDLEKVSARKRSGYSQAGG--RTARPRMSRSYLEE-EEDGDYDTFNIKDTKRRIRDADEELKEYGD 381          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: W4GIC3_9STRA (Uncharacterized protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GIC3_9STRA)

HSP 1 Score: 122 bits (305), Expect = 5.980e-27
Identity = 81/241 (33.61%), Postives = 136/241 (56.43%), Query Frame = 3
Query:  138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIKSDSKA 848
            ELRIP  P+ P   ++  TR PN+L    +AF  ++ ++E E   +     N +RWRYK D+ GR+ +  + GLP+RETN R+VKW DGS  + VGDE   + +  +  S +FV + + + +VL+C G +  K++ +P +  S +H++L +++R R  K    I++Y   ID    K++RA  ++   +Q++  NR+  R   ++   R+S +D  +LE G      D  ++ AIK   KA
Sbjct:  117 ELRIPKGPKAPKKTNLFFTRPPNVLRFVPDAFTTESIKKEKEETGDEGIYRNFVRWRYKLDAGGRIMVDPKTGLPMRETNARIVKWEDGSYTMCVGDEVLTLTQQKVANSFVFVNEQSTDETVLECHGRVKSKMTIRPISTASTSHQSLKMSMRARHNKAVVRIQEYVSEIDGTLDKEQRAAVKQ---EQMKLENRKKQRQGYEYDRDRSSRLDSTFLEEGYDGMDDDXXNLSAIKQQYKA 354          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A6G0WUF6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUF6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.010e-26
Identity = 76/236 (32.20%), Postives = 137/236 (58.05%), Query Frame = 3
Query:  138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFDSTSMRAIK 833
            EL+IP  P+ P G+++  TR PN+L    +AF  ++ ++E E   +     N +RWRYK D  GR+ +  + GLP+RE+N+R+VKW DGS  + VG E+  + +  +  S +FV + + + +VL+C G +  K++ +P +  S +H++L +++R R  K    I++Y   +D    K+++A  ++   +Q+R  NR+  R   ++   R+S +D  +LE G     +D  ++ AIK
Sbjct:  115 ELQIPKGPKAPRGSELFFTRPPNVLRFVPDAFTSESIKKEKEETGDEGIYRNYVRWRYKLDGNGRIMVDPKSGLPVRESNSRIVKWDDGSYTMFVGGEALTLTQQRVANSFVFVNEQSTDETVLECHGRVQSKLTIRPISTQSSSHQSLKMSMRARHNKAVVKIQEYISEVDGTLDKEQKAAIKQ---EQMRLENRKKQRQGYEYDRDRSSRLDSNFLEEGYDGVEYDDNNLSAIK 347          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A8K1CLR2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CLR2_PYTOL)

HSP 1 Score: 121 bits (304), Expect = 1.380e-26
Identity = 79/241 (32.78%), Postives = 134/241 (55.60%), Query Frame = 3
Query:  138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEG-------------SVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKG-STIKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAGAASGTFD 809
            E+ +P  P+ P  A   I ++PNIL +  EA+     +EE E  ++     N +RWRY+RD  G++++  +   PLRE+NT+LV+W DG+  + VG E+  +    I  S LFV +++ +              +VL+C G L +K + +P    SK+H++LT+++R +  KG   IK Y   +D E+ +++RA+  +    +LR +NR+ AR   ++   R+S MD  +LE G   G +D
Sbjct:  136 EIWLPKTPKAPKSAQYYICKMPNILRLVPEAYTKQAIQEEMENPSDEMLYRNYVRWRYQRDDDGKVKIDPQTKRPLRESNTKLVQWEDGTLTMFVGKEALSLSRQKIPNSFLFVNEISSDKPVADEDPDAPGQETVLECHGRLKEKFTIRPMTTSSKSHKSLTMSMRAKHNKGVQKIKHYISELDGEREQEQRAKINDD---RLRLQNRKKARQTYEYDRERSSRMDANFLEEGYDGGDYD 373          
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Match: A0A024T9K4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024T9K4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.020e-25
Identity = 75/221 (33.94%), Postives = 128/221 (57.92%), Query Frame = 3
Query:  138 ELRIPVLPRPPPGADVAITRLPNILGIKTEAFDPDTFEEEAE-AAEFKFTTNIIRWRYKRDSLGRLELG-EDGLPLRETNTRLVKWSDGSTQLLVGDESFDVGEHPIDRSDLFVQQMTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGST-IKKYAETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRAS-MDIGYLEAG 788
            EL IP  P+ P   ++  TR PN+L    +AF  ++ ++E E   +     N +RWRYK D+ GR+ +  + GLP+RETN+R+VKW DGS  + VGDE   + +  +  S +FV + + + +VL+C G +  K++ +P +  S +H++L +++R R  K    I++Y   ID    K++RA  ++   +Q+R  NR+  R   ++   R+S +D  +LE G
Sbjct:  122 ELSIPKGPKAPKKTNLFFTRPPNVLRFVPDAFTTESIKKEKEETGDEGIYRNYVRWRYKLDASGRIMVDPKTGLPMRETNSRIVKWEDGSFTMCVGDEVLTLTQQKVANSFVFVNEQSTDETVLECHGRVKSKLTIRPISTASSSHQSLKMSMRARHNKAVVRIQEYVSEIDGTLDKEQRAAVKQ---EQMRLENRKKQRQGYEYDRDRSSRLDSSFLEEG 339          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1156.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CAV3_9STRA7.070e-6550.59Leo1-like protein-domain-containing protein n=1 Ta... [more]
D7FUQ9_ECTSI1.470e-3181.25Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A448YW85_9STRA1.620e-3036.19Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A1W0A835_9STRA1.370e-2833.90Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A7S2XRE6_9STRA3.150e-2834.35Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B7FUI2_PHATC1.530e-2732.26Predicted protein (Fragment) n=1 Tax=Phaeodactylum... [more]
W4GIC3_9STRA5.980e-2733.61Uncharacterized protein n=11 Tax=Aphanomyces astac... [more]
A0A6G0WUF6_9STRA1.010e-2632.20Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A8K1CLR2_PYTOL1.380e-2632.78Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024T9K4_9STRA1.020e-2533.94Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1156contigA-nodosum_M_contig1156:49490..52594 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Ascophyllum nodosum dioecious OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2850.Phatr44561
PFAMsLeo1
Model size1323
Max annot lvl2836|Bacillariophyta
KEGG koko:K15177
Hectar predicted targeting categoryother localisation
Exons6
Evalue6.55e-08
EggNOG OGsKOG2428@1|root,KOG2428@2759|Eukaryota,2XDHC@2836|Bacillariophyta
Ec32 ortholog descriptionLeo1-like protein
Ec32 orthologEc-19_004270.1
DescriptionRNA polymerase II C-terminal domain phosphoserine binding
Cds size465
COG categoryS
BRITEko00000,ko03021
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1156.7.1prot_A-nodosum_M_contig1156.7.1Ascophyllum nodosum dioeciouspolypeptideA-nodosum_M_contig1156 50891..52135 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866559.5285459-UTR-A-nodosum_M_contig1156:49489..497491680866559.5285459-UTR-A-nodosum_M_contig1156:49489..49749Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1156 49490..49749 +
1680866559.6361892-UTR-A-nodosum_M_contig1156:50309..505061680866559.6361892-UTR-A-nodosum_M_contig1156:50309..50506Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1156 50310..50506 +
1680866559.646532-UTR-A-nodosum_M_contig1156:50868..508901680866559.646532-UTR-A-nodosum_M_contig1156:50868..50890Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1156 50869..50890 +
1680866559.6906219-UTR-A-nodosum_M_contig1156:52135..521891680866559.6906219-UTR-A-nodosum_M_contig1156:52135..52189Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1156 52136..52189 +
1680866559.7101724-UTR-A-nodosum_M_contig1156:52269..525941680866559.7101724-UTR-A-nodosum_M_contig1156:52269..52594Ascophyllum nodosum dioeciousUTRA-nodosum_M_contig1156 52270..52594 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1680866559.6570761-CDS-A-nodosum_M_contig1156:50890..510641680866559.6570761-CDS-A-nodosum_M_contig1156:50890..51064Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1156 50891..51064 +
1680866559.6698809-CDS-A-nodosum_M_contig1156:51508..516371680866559.6698809-CDS-A-nodosum_M_contig1156:51508..51637Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1156 51509..51637 +
1680866559.6798923-CDS-A-nodosum_M_contig1156:51973..521351680866559.6798923-CDS-A-nodosum_M_contig1156:51973..52135Ascophyllum nodosum dioeciousCDSA-nodosum_M_contig1156 51974..52135 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_A-nodosum_M_contig1156.7.1

>prot_A-nodosum_M_contig1156.7.1 ID=prot_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=155bp
MTEEGSVLQCQGHLSKKISFKPSNVLSKAHRTLTLAVRKRAVKGSTIKKY
AETIDPEKVKQERARAQEAENKQLRRRNREYARHPGDWRPGRASMDIGYL
EAGAASGTFDSTSMRAIKSDSKAGRYDDMLYVLYCKQLCTHPTLFTVSKR
KMVL*
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mRNA from alignment at A-nodosum_M_contig1156:49490..52594+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_A-nodosum_M_contig1156.7.1 ID=mRNA_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=mRNA|length=3105bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:49490..52594+ (Ascophyllum nodosum dioecious)
ACGCGTCCGCTTCCTCCACAGCGGAGGCATTACGAGGGTCGTCGGCAATC GGCGCGTCAGTTTTCGGCAGCGACGACGAAGAAGGGGATGAAGGGGGGGG GGAAGAGGAAGCCCCGCCCCCCGCGCTGCCGGACAGGGAGCTCCGGATCC CCGTGTTACCGCGGCCTCCGCCCGGGGCGGACGTGGCCATCACGCGTCTG CCGAACATTCTTGGCATCAAGACAGAGGCGTTCGACCCGGACACCTTCGA GGAGGAGGCGGTACGCTATTTTATAGTGTGTTTATATATATATATATCAC ATACATTTTTTATTTCGAAGTGTTTCGTTGAAACTTGAAGCTACGGTGGG GCAGGGGAGGAAGAGGGCGTGGAGGTTTTGAGTGACTGGGTCGCTCCCGC GGGATATATGAGTACATGGAGTCTTGTTGATGCGGGCCTGCCTGCTTCTC ACAATCAGGATGTGAACGAATCGAGAACCGACCGTTCTCTCCTCCTTGGC AATCTAGAATGCCCTTCGCTTCTCTCGTCTTTTTGTATGTTTGTGATTTA CGGATGCTCTATTTTTTTGTTATGTTGTGTTTTATTTTGAAGGGGGAAGG GAATGGGTCGAAGTTTTCAAAAGCTCCGGGGGGGTGGGGGCGGTTGGTTA GTGTAGTCAATGTTAGTTCAATGATAGCGGTTTACGACACCAGACAGTAC GTACCGAACAGACGATGGGGAGCGGGGTTTCCGACGTCGGGCCTCGGCTT TTGCTGCGAGGGGGGGAAGCGCGTACGGCTGATTTCGACACCCTTTTCCC TCGCGACGTGTGTGCCACAGGAAGCCGCCGAATTTAAGTTCACGACGAAC ATAATCCGGTGGAGGTACAAGCGGGACAGCCTGGGTCGGCTGGAGCTCGG TGAGGACGGCCTCCCCCTGCGGGAAACCAACACCCGCCTCGTGAAGTGGA GCGACGGGTCGACTCAGCTGCTCGTGGGTGACGAGTCTTTTGACGTGGGG GAGCACCCCATCGACAGGTGAGCAAGGAGGGACCGGGACCCAGGTTGGTA TGTAATGGGTGGGGTAGGATTGGACGGGCTGACACGAGGCGGACGGAAAG GGGTTGGGATGTGGTGGGGTTGATATCCGGCAGGGGATTGGGACAGGTTG GTGTGTCATGGGTGGGGTAGGATTGGACGGGCTGACACGAGGCCGGACGG AAAGGGATTGGGATGTGGTGGGGATGATAGCGGGGTGATATCCGGGTATC CCCTCGCGAGGGAGAAAACACCACAAACTTGATCCCCCTCCCCCACCCAC TACAGTACCAGTAAACGCCTCCTCCTGCTGAAAGTCGTACCTTTTGCCTG CACTCTTCGTACTGTTGTACATTATGTAGGAGCGATCTCTTCGTCCAACA AATGACGGAGGAGGGCAGCGTCCTCCAATGCCAGGGGCACCTTTCGAAGA AAATATCCTTTAAACCGAGCAACGTCCTCAGCAAGGCCCATCGGACGCTT ACCTTGGCCGTTCGTAAGCGGGCGGTGAAGGGCTCAACGATAAAAAAATA CGCGGAGACAATTGATCCGGAAAAGGTACGTCTGTGTGTGTGTGAATTAT ATTGCACATAACCGCGCAATCCAGCTCTGCCATACTAGTTATTCATGCTA AAAGTTGCAATAGTCCTCCCAATGGGGGGTCAATGATATTTGATGCGAAA ACATCCCCTGTTCTAAACGCCTCCTTGTCAAGCTCTGCCTCCTTGTTAAG CAAGAGCGAGAGCGTTTCTTGCTCGATCCTGTGCAAATCCCCCACCCCAA CTCCCCCTCTTTAAACGCCTCCTTAGCACGCCTTGCTTTGAAATGTATAT TGACCCTCCGCAAAGCCCCAACCCCAACTCCCCGTCTTTATAAGGCCTCA TTAACACGAGATGCCTCCCAGGTATAGCAAGAGCCAGCATTTCTCTCTCA ACCGCCCCCCCCCCCATTCAAACGCCATCCCTCTATAAAAACGCCTCCTT ACCGCGCCCTGAATCCCAGGTGAAGCAAGAGCGAGCGAGGGCGCAAGAGG CCGAGAACAAACAGCTGAGGAGGCGAAACCGGGAGTACGCCAGGCATCCG GGGGACTGGAGGCCCGGAAGAGCTTCGATGGATATCGGATATCTAGAGGT ACATGATGAATACATGGTTGCGATGCTGTCCTATCGTAAACCATACCTGG TGATTGTATTTGTGATGTAAATGGTACTCCCGAAGAGCTAAAGCTTAGAG CTATAAAGCCGGTTGATTACTCTCGCCGGAACCGTGACTCGATTTGTTTC TTTATTAAGTAGACAAAGCTCTTCTTTGCAAATTTCCGGGCTGGAGAGTA CGGACATGTAAACACACGTAAGGGGGAGAGCTGCTGGGTCGTGGTTTCCT TTCCTGTTTTATTTTTTATTTTTTACTTTTTTGTGTTTTTTTTACATTTT AAAATTTATTCCTATTTCTTGTGTGTGCCTGCAGGCAGGTGCAGCTTCCG GGACGTTCGACAGTACCAGCATGAGGGCCATCAAAAGCGACTCCAAAGCT GGTCGCTACGACGATATGCTGTACGTACTGTACTGTAAACAGCTGTGTAC GCATCCCACTTTATTTACTGTTTCAAAACGAAAAATGGTGTTATGATATA ATATAATATATGGGTATGACGCCGGAGGGTAGGAAACATGAAAAGCTTTT GGTAGTACAGTATGTACTATTTTTCTATCTTGTTCATAAAAGAGAGGTCT CGACGAAACGTTGAGCCTTTTTTTTTTATCCAATATTTGTTACCAGGTAT CTGTGAAAACGTCGCTTTTATGCTATATAGGGGGGGGGGACGATGAGTTT CGTCCCCTCGAAATATGGCGTTATTAATAAAAGCGTTTGCCCTCTTACTG TCTACATAGCCACGTAGTTGTACTATACGTCATTTTATTGACTTTGATCA CACTATTGGATGAATTGTTTTGGGTTGTAACGTATATGCAGAAATGTAGA CTTGAAAATAAAAGAGCGGCCGCGTCGCCTTTTATTGCTTTTCTCTGATC GTGTTTTACGAGAGTTATGCAAGTTTGTGGTGTCAAGTTCTTTGTCTCGT GTGAT
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Coding sequence (CDS) from alignment at A-nodosum_M_contig1156:49490..52594+

>mRNA_A-nodosum_M_contig1156.7.1 ID=mRNA_A-nodosum_M_contig1156.7.1|Name=mRNA_A-nodosum_M_contig1156.7.1|organism=Ascophyllum nodosum dioecious|type=CDS|length=465bp|location=Sequence derived from alignment at A-nodosum_M_contig1156:49490..52594+ (Ascophyllum nodosum dioecious)
ATGACGGAGGAGGGCAGCGTCCTCCAATGCCAGGGGCACCTTTCGAAGAA
AATATCCTTTAAACCGAGCAACGTCCTCAGCAAGGCCCATCGGACGCTTA
CCTTGGCCGTTCGTAAGCGGGCGGTGAAGGGCTCAACGATAAAAAAATAC
GCGGAGACAATTGATCCGGAAAAGGTGAAGCAAGAGCGAGCGAGGGCGCA
AGAGGCCGAGAACAAACAGCTGAGGAGGCGAAACCGGGAGTACGCCAGGC
ATCCGGGGGACTGGAGGCCCGGAAGAGCTTCGATGGATATCGGATATCTA
GAGGCAGGTGCAGCTTCCGGGACGTTCGACAGTACCAGCATGAGGGCCAT
CAAAAGCGACTCCAAAGCTGGTCGCTACGACGATATGCTGTACGTACTGT
ACTGTAAACAGCTGTGTACGCATCCCACTTTATTTACTGTTTCAAAACGA
AAAATGGTGTTATGA
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