prot_A-nodosum_M_contig1142.8.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1142.8.1
Unique Nameprot_A-nodosum_M_contig1142.8.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length112
Homology
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A6H5KBT2_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBT2_9PHAE)

HSP 1 Score: 79.0 bits (193), Expect = 7.780e-15
Identity = 38/103 (36.89%), Postives = 57/103 (55.34%), Query Frame = 0
Query:   13 VAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            + +EAAGQ+Y+Q   F YLG  ++  GD+  EI  R+  AW C  +Y R ++D P      K+R L+AE +E +L     W+   G +  LR  H  +LLR +
Sbjct:  342 LTIEAAGQKYAQTTEFRYLGGLVNEHGDLTREINYRSRGAWACLRRYGRELFDRPQAPFRLKIRLLRAEAMEALLYGCMTWSPLSGHYQTLRSIHHRLLLRVI 444          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A183SI55_SCHSO (Uncharacterized protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183SI55_SCHSO)

HSP 1 Score: 56.2 bits (134), Expect = 8.000e-7
Identity = 34/115 (29.57%), Postives = 53/115 (46.09%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            MH  PP+ +  A  +   G +   V+TF YLGST+S    +  E+ +R   A   F +   +V++   I +  K++  KA  L+ +L     WT+      KL   H   L R L
Sbjct:  446 MHQTPPSTEYNAPRIHVNGGQLKNVETFAYLGSTLSRNTRIDDEVVQRISKASQTFGQLQASVWNRHGIHLNTKLKMYKAVALKTLLYEAETWTVYSNQARKLNHIHLSCLRRIL 560          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A8K0K052_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0K052_LADFU)

HSP 1 Score: 54.3 bits (129), Expect = 8.280e-7
Identity = 31/88 (35.23%), Postives = 43/88 (48.86%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVMLW 88
            M    P       AV  A  +  +VD F YLGS ++S GD+  EI  R   A + F K  + V+ N  ++   KV   KA VL V+L+
Sbjct:   26 MKCHAPLSPQIETAVSLASSQIEEVDQFSYLGSLVTSKGDMDTEINHRFQCAAHAFYKLRKRVFKNKDLSAKTKVAVFKAVVLSVLLY 113          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A183TFG9_SCHSO (Reverse transcriptase domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183TFG9_SCHSO)

HSP 1 Score: 55.8 bits (133), Expect = 8.720e-7
Identity = 32/107 (29.91%), Postives = 52/107 (48.60%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAH 102
            MH  PP+ +  A  +   G +   V+TFVYLGST+S    +  E+ +R   A   F +   +V++   I +  +++  KA VL  +L     WT+     +KL   H
Sbjct:  188 MHQPPPSAEYNAPRINVNGAQLKNVETFVYLGSTLSRKTRIDDEVTQRISKASQAFGRLQASVWNRHGIHLNTQLKINKAVVLTTLLYKAETWTVYSNQTNKLNHFH 294          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A183TGW2_SCHSO (Uncharacterized protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183TGW2_SCHSO)

HSP 1 Score: 54.7 bits (130), Expect = 1.640e-6
Identity = 34/115 (29.57%), Postives = 51/115 (44.35%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            MH  PP+ +  A  +   G +   V+TF YLGST+S       E+ +R   A   F +   +V++     +  K++  KA VL  +L     WT+      KL   H   L R L
Sbjct:   23 MHQPPPSAEYNAPQININGAQLKNVETFAYLGSTMSRNARTDVEVAQRISKASQAFGRLQASVWNRHGFHLNTKLKMYKAVVLTTLLYGVEAWTVYSNQARKLNHFHLSCLRRIL 137          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A183TEZ8_SCHSO (Reverse transcriptase domain-containing protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183TEZ8_SCHSO)

HSP 1 Score: 54.7 bits (130), Expect = 2.530e-6
Identity = 36/115 (31.30%), Postives = 51/115 (44.35%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            MH  P T +  A  +   G +   V+TF YLGST+S    +  E  +R   A   F +   +V++   I +  K++  KA VL  +L     WTL      KL   H   L R L
Sbjct:  143 MHQPPFTAEYNAPRINVNGAQLKNVETFAYLGSTLSRNAKIDDEFAQRISKASQAFGRLQASVWNRHSIHLNTKLKMYKAVVLTTLLYGAETWTLYSNLAMKLNHFHLSCLRRIL 257          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: UPI00077A9CA8 (uncharacterized protein LOC107358129 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077A9CA8)

HSP 1 Score: 52.4 bits (124), Expect = 8.570e-6
Identity = 32/95 (33.68%), Postives = 47/95 (49.47%), Query Frame = 0
Query:   19 GQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLR 108
            GQ    V+TF YLGSTIS    +  EI +R   A + F + S  V++   I++ +K++  +A VL  +L     WT+       L   H   LLR
Sbjct:   41 GQTLQAVETFTYLGSTISRTATIDAEINKRISKASSAFGRLSEKVWERREISLENKLKVYRAVVLTTLLYGSETWTVYRRHEKLLNHFHLRCLLR 135          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: UPI00077B22FF (uncharacterized protein LOC107355912 n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B22FF)

HSP 1 Score: 53.1 bits (126), Expect = 9.040e-6
Identity = 33/96 (34.38%), Postives = 45/96 (46.88%), Query Frame = 0
Query:   21 RYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCLN 111
            R   VDTFVYLGSTIS  G +  EI  RT  +   F K  + V+ +  I +  K+      +L  +L     WT       +L+  H+  L R LN
Sbjct:  329 RLEVVDTFVYLGSTISRDGSLDAEINLRTQKSSAAFRKLEKRVWSDRGITIKTKISVYSTCILTALLYSSECWTTHQRHLKQLKRFHQKCLRRILN 424          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A183SM67_SCHSO (Uncharacterized protein n=1 Tax=Schistocephalus solidus TaxID=70667 RepID=A0A183SM67_SCHSO)

HSP 1 Score: 51.6 bits (122), Expect = 1.110e-5
Identity = 32/115 (27.83%), Postives = 49/115 (42.61%), Query Frame = 0
Query:    1 MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            MH  PP+ K  A  +   G +   V+TF YLGST+S    +  E+ +R       F +   + ++   I +  K++  KA VL  +L     WT+           H   L R L
Sbjct:   27 MHQPPPSAKYNAPRINVNGDQLKNVETFAYLGSTLSRNMIINDEVTQRISKPRQAFGRLQTSTWNRHGIHLNTKLKMYKAVVLTTLLYGGETWTVYSNQARNRNHFHLSCLRRIL 141          
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Match: A0A5C6MLY4_9TELE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Takifugu flavidus TaxID=433684 RepID=A0A5C6MLY4_9TELE)

HSP 1 Score: 52.8 bits (125), Expect = 1.120e-5
Identity = 37/113 (32.74%), Postives = 55/113 (48.67%), Query Frame = 0
Query:    3 MRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTGYAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVML-----WTLSPGDFDKLREAHRGMLLRCL 110
            +RPP++      +EA       V+TF YLGSTIS    +  E+ +R G A + F K +  V+DN  +    KV+  +A V+  +L     WTL      +L   +    LRCL
Sbjct:  124 LRPPSITINNYTLEA-------VNTFTYLGSTISDNLSLDVELSKRIGKAASTFRKLTERVWDNGKLTTHTKVQVYRACVISTLLYGSETWTLYSHQERRLNSFY----LRCL 225          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1142.8.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A6H5KBT2_9PHAE7.780e-1536.89Reverse transcriptase domain-containing protein (F... [more]
A0A183SI55_SCHSO8.000e-729.57Uncharacterized protein n=1 Tax=Schistocephalus so... [more]
A0A8K0K052_LADFU8.280e-735.23Uncharacterized protein n=1 Tax=Ladona fulva TaxID... [more]
A0A183TFG9_SCHSO8.720e-729.91Reverse transcriptase domain-containing protein n=... [more]
A0A183TGW2_SCHSO1.640e-629.57Uncharacterized protein n=1 Tax=Schistocephalus so... [more]
A0A183TEZ8_SCHSO2.530e-631.30Reverse transcriptase domain-containing protein n=... [more]
UPI00077A9CA88.570e-633.68uncharacterized protein LOC107358129 n=1 Tax=Acrop... [more]
UPI00077B22FF9.040e-634.38uncharacterized protein LOC107355912 n=1 Tax=Acrop... [more]
A0A183SM67_SCHSO1.110e-527.83Uncharacterized protein n=1 Tax=Schistocephalus so... [more]
A0A5C6MLY4_9TELE1.120e-532.74Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1142contigA-nodosum_M_contig1142:252860..253210 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1142.8.1mRNA_A-nodosum_M_contig1142.8.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1142 252860..253229 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1142.8.1 ID=prot_A-nodosum_M_contig1142.8.1|Name=mRNA_A-nodosum_M_contig1142.8.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=112bp
MHMRPPTMKAEAVAVEAAGQRYSQVDTFVYLGSTISSVGDVGPEIKRRTG
YAWNCFLKYSRAVYDNPYIAVADKVRFLKAEVLEVMLWTLSPGDFDKLRE
AHRGMLLRCLNA
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