prot_A-nodosum_M_contig1142.5.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1142.5.2
Unique Nameprot_A-nodosum_M_contig1142.5.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length474
Homology
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: A0A6H5KBW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBW3_9PHAE)

HSP 1 Score: 422 bits (1084), Expect = 3.610e-140
Identity = 225/483 (46.58%), Postives = 288/483 (59.63%), Query Frame = 0
Query:    1 MTRMTAVLLICLAPSVLAASPPAGSLRRSQEDTE---AAGVAPRRLSTSDLEPAEDEEGYYAHLGCYMDK-KDDRVLGMKLARDDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSNIYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXXXXEVGSVNNEKAEYPFDG----TTFSGDGTYYGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPG-APYPLYGAQRVKTTTMMGKTATQEVSL 473
            MTR+ A LL+C  P          SL  S    E   AAG A R LS S  E        Y HLGCY+D    +    + L  D +T ELC++ C+  GAF+M TQ GNEC CSRE DLD+   + G CD+PCAGD +E CGG    DLY+L   D P   EY  C++D  E RVM ++ + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G G CHM CAGD+ +ACGG +AFSL++   D  P+PA                      S++  +++ P  G    TTF GDGTYY   S GNC      PS+Y GM PVALNAAQYG S +CG+C+EGEG+G G G +PI G+FK ++MDKCPEC  GDLDF    DGRWDI W+FV CPG +    + E +  +YWKIQPRGT TPV  LT+ G + ++TDDN FE+   +  P Y  Q V TTT+ G     E+S+
Sbjct:   65 MTRLAAALLVCATP--------VASLETSLRGAEVAAAAGGARRGLSGSSYES-------YEHLGCYVDNGMVNSSPHLPLVLDAMTNELCYDRCHELGAFFMGTQKGNECRCSREEDLDYFSFESGVCDEPCAGDSTETCGGDLTLDLYKLTPADEPDHEEYEGCWSDLGESRVMQDMLVDESMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGPGTCHMHCAGDSGSACGGYWAFSLFKFGADGMPDPAVPDVSEPPSEPAPEPVVSTPAPSMSEAESKTPISGGVYGTTFEGDGTYYTGISAGNCGFFDDFPSIYSGMTPVALNAAQYGDSLMCGSCVEGEGTGGGGGDNPI-GTFKGFIMDKCPECHEGDLDFGTGLDGRWDIEWRFVACPGEEVSFKVVEMT-PYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGNPWYEPQMVVTTTVGGVVEETEMSV 530          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: D8LGP4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP4_ECTSI)

HSP 1 Score: 412 bits (1058), Expect = 9.490e-137
Identity = 242/520 (46.54%), Postives = 300/520 (57.69%), Query Frame = 0
Query:    1 MTRMTAVLLICLAPSVLAASPPAGSLRRSQEDTE-AAGVAPRRLSTSDLEPAEDEEGYYAHLGCYMDKKDDRVLGMKLAR-------DDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSNIYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYRL-IDESPEPAXXXXXXXXXXXXXXXXXXXEV------------------------------------GSVNNEKAEYPFDGTTFSGDGTYYGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEV--PGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            MTR+ A LL+C  P          SL  S    E +AG A R LS S  E        Y H+GCY+D       GM  AR       + +T E+C++ C+  G+F+M TQ GNEC CSRE DL +   D G CD PCAGD  E CGG    DLY+L    TP   EY+ C++D  E RVM ++ + + MT+ +CRDHC+  +A+YYATQYG+EC+CG S    DYE +G G CHM C GD+ +ACGG +AFSLY+   D  PEP      XXXXXXXXXXXXXX                                      G  +    EY   G TF+G+GTYY  TS GNC      PS+YDGM PVALN  QYG S +CGAC+EGEG+G G+GSDP+ G+FK ++MDKCPEC+ GDLDF    DGRWDI WKFVECP  +  SF  E   ++YWKIQPRGT TPV  LT+ G + ++TDDN FE+  P    P Y  Q V TTT+ G     E+S+
Sbjct:    1 MTRLAAALLVCATP--------VASLETSLRGAEVSAGGARRGLSGSSYEA-------YEHVGCYVDN------GMVNARPHLPLVMETMTNEMCYDRCHELGSFFMGTQKGNECRCSREEDLAYSAFDFGVCDIPCAGDSDETCGGQLTIDLYKLTAAQTPDHEEYVGCWSDANESRVMEDMLVDEGMTTDMCRDHCESSDAVYYATQYGNECFCGYSSDPEDYETHGLGTCHMHCGGDSGSACGGYWAFSLYQFGADGMPEPDVPESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSSGGGGGDVSGGEY---GITFNGEGTYYTGTSAGNCGFFDDFPSIYDGMTPVALNEPQYGDSLMCGACVEGEGTGGGSGSDPV-GTFKGFIMDKCPECSEGDLDFGTGKDGRWDIKWKFVECPAGEEVSFKVEQKTEYYWKIQPRGTATPVESLTIGGRAAARTDDNHFELEHPSGD-PWYEPQMVVTTTVGGVVEETEMSV 494          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: D8LHU1_ECTSI (Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHU1_ECTSI)

HSP 1 Score: 234 bits (597), Expect = 2.880e-71
Identity = 109/188 (57.98%), Postives = 134/188 (71.28%), Query Frame = 0
Query:  288 PFDGTTFSGDGTYYGKT--SNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            P+D   FSGD TYYG T   +GNCAIRSP+P MYDGMIPVALN  QY  S +CGACIEGEG G G G DP+ G+FKAYV D+CPEC  GDLDF+  GDGRWDISW FV C G    +F+FEGS++FYWKIQPRG ++PV  L ++G    +++DNFF + G P+   G Q V T T++ K   Q V++
Sbjct:   36 PYD-EQFSGDATYYGVTPDGDGNCAIRSPLPEMYDGMIPVALNDEQYADSYMCGACIEGEGFGEGEGRDPVEGAFKAYVTDRCPECLFGDLDFAADGDGRWDISWHFVPCEGGSDQTFLFEGSNEFYWKIQPRGGRSPVERLWINGDEAERSEDNFFILEGGPFD--GEQEVHTKTVLNKRRRQSVAM 220          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.160e-70
Identity = 109/183 (59.56%), Postives = 132/183 (72.13%), Query Frame = 0
Query:  291 GTTFSGDGTYYGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYPLYGAQRVKTTTMMGKTATQEVSL 473
            G  +SG+GTYYG T+ G C+    +P MYDGMIPVALNA QYG S +CGAC+EG  SG+G+G++PI  +FKA++ DKCPEC  GDLDFS SGDGRWDI WKFV CPG +  SF+   ++ +YWK+QPRGT TPVV LTVDG S  +T DN FEV        GAQ V TTT+ G T T EVS+
Sbjct:  105 GEEYSGEGTYYGHTTAGMCSFFDDVPEMYDGMIPVALNAEQYGDSLMCGACVEGTASGSGSGNNPIPSTFKAFITDKCPECQKGDLDFSMSGDGRWDIEWKFVACPGEET-SFVSPSANPYYWKVQPRGTTTPVVSLTVDGQSAMRTTDNHFEVHNDGAAWSGAQTVVTTTVSGVTETAEVSV 286          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: D7FRE8_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRE8_ECTSI)

HSP 1 Score: 249 bits (637), Expect = 4.250e-69
Identity = 111/202 (54.95%), Postives = 145/202 (71.78%), Query Frame = 0
Query:   56 GYYAHLGCYMDKKDDRVLGMK-LARDDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSNIYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYRLIDESPEP 255
            G Y H+GC+ D + DRVL    L   D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D G CD PC GD+SE CGG ++F+LY L W   P D EY+ CY D+  +RV+S++  SDDMT+A+CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++  +    P
Sbjct: 1143 GAYEHVGCFQDSQSDRVLQRSGLISGDMTAELCYETCSTKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCRGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYTDNKGDRVLSDMISSDDMTAAVCREHCADKDAPYYGTQFSSECWCGTSDDDADYERHGEGVCHMACSGDGTVACGGYDAYSLFKYDNGGEAP 1344          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: A0A6H5JJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ37_9PHAE)

HSP 1 Score: 229 bits (584), Expect = 3.350e-62
Identity = 103/194 (53.09%), Postives = 138/194 (71.13%), Query Frame = 0
Query:   57 YYAHLGC--YMDKKDDRVLGMKLARDDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRH-DVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSNIYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYR 247
            Y+A L C  ++ K+    +   L   D+TAELC+E C+  GA YMATQ+G EC+CSR+G LD+DRH D G CD PC GD+SE CGG ++F+LY L W   P D EY+ CYAD   +RV+ ++  SD+MT+ +CR+HC DK+A YY TQ+  ECWCGTSD  ADYE++G+G CHM C+GD + ACGG  A+SL++
Sbjct:  797 YFAGLACLPHLAKQPLHHVRSGLISSDMTAELCYETCSAKGAAYMATQWGVECWCSRDGSLDYDRHGDTGVCDYPCIGDESETCGGVHSFNLYRLSWAPAPEDEEYVGCYADSKGDRVLFDMISSDNMTAGVCREHCADKDAPYYGTQFSSECWCGTSDDEADYERHGEGVCHMACSGDGTVACGGYDAYSLFK 990          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: F2Z7J0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis andersonii TaxID=408198 RepID=F2Z7J0_9FLOR)

HSP 1 Score: 211 bits (536), Expect = 2.540e-61
Identity = 95/162 (58.64%), Postives = 121/162 (74.69%), Query Frame = 0
Query:  293 TFSGDGTYYGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVP---GAPYPL 451
            TF GDGTYYG T+ GNCAIRSP+P MY GM+PVA+N AQY  S+ CGAC+   G G G+G++P+ G+FKAYV D+CPEC  GD+D SKSGDGRW + W+F+ CPG +   F+FEGS++FY K+QPRG KTPV   +V+G  G+KT DNF+ +    G  YPL
Sbjct:   23 TFFGDGTYYGYTTRGNCAIRSPLPGMYSGMVPVAINNAQYEESKSCGACLLVTGYGQGSGANPVVGTFKAYVHDRCPECKYGDIDLSKSGDGRWKVQWRFIPCPG-EWVFFLFEGSNRFYLKLQPRGLKTPVTYFSVNGQQGTKTQDNFYILQNGGGFRYPL 183          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: A0A2V3ISL2_9FLOR (Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ISL2_9FLOR)

HSP 1 Score: 207 bits (526), Expect = 8.180e-60
Identity = 92/151 (60.93%), Postives = 117/151 (77.48%), Query Frame = 0
Query:  294 FSGDGTYYGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNGAGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDAPSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEV 444
            F G+GTYYG T+ GNCAIRSP+PSMY+GM+PVA+N AQY  S  CGAC++  G G G+G++PI G+FKAYV D+CPEC  GD+D SK GDGRW + WKF+ CPG +   F+FEGS+++Y K+QPRG KTPV  L+V G  G+KT DNF+ V
Sbjct:   29 FHGEGTYYGYTTRGNCAIRSPMPSMYNGMLPVAINNAQYENSASCGACLQVTGYGQGSGANPIRGTFKAYVHDRCPECKYGDIDLSKGGDGRWRVHWKFIPCPG-EFVFFLFEGSNRYYLKLQPRGLKTPVSALSVGGQWGTKTQDNFYIV 178          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: D8LED7_ECTSI (EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED7_ECTSI)

HSP 1 Score: 206 bits (523), Expect = 1.680e-54
Identity = 93/203 (45.81%), Postives = 138/203 (67.98%), Query Frame = 0
Query:   54 EEGYYAHLGCYMDKKDDRVLGMKLARDDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSN-IYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYRLIDESPEP 255
            +EGY +++GC+ D K+DRV         +T  +C EYC    A YMATQ+G EC+CS + ++++DRH  G CD  C GD ++ CGG+ AFDLY++  P  PT  EY+ C+ADD E+R++ + I +  DMT A+CR +C++++A +YATQYG ECWCG S+   DY+++G+G+C   C+GD + ACGG  AF+L++  D   EP
Sbjct:  430 DEGY-SYVGCFADSKEDRVFEYMKTSSTMTTAVCLEYCLDRRATYMATQYGYECWCSVDAEVEYDRHSDGVCDHACGGDAADICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQAVCRTYCEERDAYFYATQYGDECWCGMSNDEEDYKRHGRGSCLAGCSGDPTVACGGFDAFNLFKF-DGIAEP 630          
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Match: A0A6H5JMV6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMV6_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 3.480e-54
Identity = 87/195 (44.62%), Postives = 131/195 (67.18%), Query Frame = 0
Query:   54 EEGYYAHLGCYMDKKDDRVLGMKLARDDITAELCHEYCNVNGAFYMATQFGNECFCSREGDLDFDRHDVGTCDKPCAGDDSERCGGYYAFDLYELVWPDTPTDLEYMDCYADDTEERVMSN-IYISDDMTSAICRDHCKDKNALYYATQYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYR 247
            EEGY +++GC+ D KDDRV         +T  +C EYC    A +MATQFG EC+CS + ++++DRH  G CD  C G+ ++ CGG+ AFDLY++  P  PT  EY+ C+ADD E+R++ + I +  DMT  +CR +C++++A +YATQYG ECWCG S+   DY+++G+G+C   C+GD + ACG  +   +Y+
Sbjct:    8 EEGY-SYVGCFADSKDDRVFEYMKTSPTMTTAVCLEYCLDRRATFMATQFGIECWCSVDAEIEYDRHSDGVCDCECGGEATDICGGFDAFDLYKITEPTEPTGDEYVGCFADDREDRLLGDEIKLQPDMTQTVCRTYCEERDAYFYATQYGDECWCGMSEDEQDYKRHGRGSCLAGCSGDPTVACGRDFQVVIYK 201          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1142.5.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KBW3_9PHAE3.610e-14046.58Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
D8LGP4_ECTSI9.490e-13746.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LHU1_ECTSI2.880e-7157.98Putative lipoprotein n=2 Tax=Ectocarpus TaxID=2879... [more]
D8LRN1_ECTSI1.160e-7059.56Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7FRE8_ECTSI4.250e-6954.95EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JJ37_9PHAE3.350e-6253.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
F2Z7J0_9FLOR2.540e-6158.64Uncharacterized protein n=1 Tax=Gracilariopsis and... [more]
A0A2V3ISL2_9FLOR8.180e-6060.93Expansin-YoaJ n=1 Tax=Gracilariopsis chorda TaxID=... [more]
D8LED7_ECTSI1.680e-5445.81EsV-1-166 n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A6H5JMV6_9PHAE3.480e-5444.62Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002889Carbohydrate-binding WSCSMARTSM00321SLG_2coord: 156..249
e-value: 1.9E-6
score: 37.4
coord: 57..149
e-value: 0.024
score: 8.5
IPR002889Carbohydrate-binding WSCPFAMPF01822WSCcoord: 159..239
e-value: 2.0E-13
score: 50.3
coord: 61..139
e-value: 1.2E-12
score: 47.8
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 156..249
score: 9.899803
IPR002889Carbohydrate-binding WSCPROSITEPS51212WSCcoord: 57..149
score: 8.808571
IPR036908RlpA-like domain superfamilyGENE3D2.40.40.10coord: 290..395
e-value: 2.1E-17
score: 65.2
IPR036908RlpA-like domain superfamilySUPERFAMILY50685Barwin-like endoglucanasescoord: 293..415
IPR036749Expansin, cellulose-binding-like domain superfamilyGENE3D2.60.40.760coord: 402..473
e-value: 4.3E-6
score: 28.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 252..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 254..268
NoneNo IPR availablePANTHERPTHR24269KREMEN PROTEINcoord: 61..146
coord: 148..267
NoneNo IPR availablePANTHERPTHR24269:SF16PROTEIN CBG14225coord: 148..267
NoneNo IPR availablePANTHERPTHR24269:SF16PROTEIN CBG14225coord: 61..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1142contigA-nodosum_M_contig1142:168776..181012 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1142.5.2mRNA_A-nodosum_M_contig1142.5.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1142 167091..182470 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1142.5.2 ID=prot_A-nodosum_M_contig1142.5.2|Name=mRNA_A-nodosum_M_contig1142.5.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=474bp
MTRMTAVLLICLAPSVLAASPPAGSLRRSQEDTEAAGVAPRRLSTSDLEP
AEDEEGYYAHLGCYMDKKDDRVLGMKLARDDITAELCHEYCNVNGAFYMA
TQFGNECFCSREGDLDFDRHDVGTCDKPCAGDDSERCGGYYAFDLYELVW
PDTPTDLEYMDCYADDTEERVMSNIYISDDMTSAICRDHCKDKNALYYAT
QYGHECWCGTSDVFADYEKYGKGACHMRCAGDTSAACGGRYAFSLYRLID
ESPEPAPTPEPTPEPTPEPAAESTAEVGSVNNEKAEYPFDGTTFSGDGTY
YGKTSNGNCAIRSPIPSMYDGMIPVALNAAQYGGSELCGACIEGEGSGNG
AGSDPITGSFKAYVMDKCPECATGDLDFSKSGDGRWDISWKFVECPGSDA
PSFIFEGSHQFYWKIQPRGTKTPVVELTVDGASGSKTDDNFFEVPGAPYP
LYGAQRVKTTTMMGKTATQEVSL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002889WSC_carb-bd
IPR036908RlpA-like_sf
IPR036749Expansin_CBD_sf