prot_A-nodosum_M_contig114.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig114.3.1
Unique Nameprot_A-nodosum_M_contig114.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length711
Homology
BLAST of mRNA_A-nodosum_M_contig114.3.1 vs. uniprot
Match: D8LHQ5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHQ5_ECTSI)

HSP 1 Score: 415 bits (1067), Expect = 4.890e-127
Identity = 236/466 (50.64%), Postives = 304/466 (65.24%), Query Frame = 0
Query:  230 YEAKVVRMTGPTSSDWNGAKYTLAVTTPVYQQSQKFGTIIGTGTVNETDEAPLTQDYDLERGCYQLYTTAGSRPYDVLWEVEVYDDDGEDDGVRDAAEGGGKDQQTFGVGGALCGLSTCYRTCYLDAEDARTNACASFGDLLAPLTEEAGAKCNCTSEEQLELRLACLSRG-CDESSQCYM-GNTDS-IGSASTLRITTYITTATNSIDEDAIGVALAQWLDFDPGYVQLTDIDGHETDTTSASSSNRRLEALDETLVEETLETTHHAVG---------------RSLQTGTFRRLEFLVISSDESDFDDAMSTIDAGIRGFNTVLAAQDEESGLTTAEAYTAEYSIGQENVPASDIPDVDGGIAGTGIGQGVNEFGDI-IEGTEAPAA---DATDFTREAQFLVGAGLVVVVTIALSIVACVVCHMKRKERREFRRKNEPVNGRARPVEYVDPWGSVARTFQNDG 673
            Y+ ++V  TG TS++WNGA Y L V T V  Q+    +++  GT+NE D +P TQ  +LERGCY LYTTAG+RPYDV+W+VEV    GE   V  +AEGGG+D  TFG+GGALCG+S CYR CY + +D   + C SFGDLLAP  E AGA C CT +EQ++LR+ CL R  C+  SQCY+ G+  + I  A TLRI TY+T  T ++  D +  A+AQWLD DP YV+L  ++G  T+T S   + RRL +  E              G               R LQT TF+RLEF +I   ++DF D  ST+  G+R  NTVL+AQ+EES ++  EAYTAEYSI  E V  +D P V   IAG+G G GV+E G++ +  TEAP     D  DFTR+ QFLVGAGLVVVV+  LSIVAC+VCHMKR++R+EF+R+N+  +GR +PV YVDPWGSVA TFQ DG
Sbjct:  692 YQVEIVASTGDTSTNWNGAAYRLEVGTVVPGQTLPSSSLLAFGTINEGDTSPWTQTLNLERGCYVLYTTAGTRPYDVVWQVEV---GGE---VYQSAEGGGQDYHTFGLGGALCGMSDCYRLCYEEHDDRDADECKSFGDLLAPSDEPAGANCTCTQDEQIDLRIECLGRDDCESRSQCYLLGDAAAEITMAPTLRIVTYVTVVTTNVYVDGMETAVAQWLDLDPAYVELARVNGKSTET-STEVTRRRLISAGENXXXXXXXXVRLGSGWGWSDEKGGQRRARNRRLQTATFKRLEFRIIGDSDNDFPDITSTLSEGVRALNTVLSAQNEESEVSEVEAYTAEYSINSEYVATADTPGVS--IAGSGGGTGVDEEGEVNVLATEAPEVADDDIGDFTRQTQFLVGAGLVVVVSFFLSIVACIVCHMKRRDRKEFKRRNQGEDGRPKPVAYVDPWGSVATTFQKDG 1148          
BLAST of mRNA_A-nodosum_M_contig114.3.1 vs. uniprot
Match: A0A6H5LPC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LPC9_9PHAE)

HSP 1 Score: 204 bits (519), Expect = 1.440e-57
Identity = 108/175 (61.71%), Postives = 133/175 (76.00%), Query Frame = 0
Query:  503 TFRRLEFLVISSDESDFDDAMSTIDAGIRGFNTVLAAQDEESGLTTAEAYTAEYSIGQENVPASDIPDVDGGIAGTGIGQGVNEFGDIIE-GTEAPAA---DATDFTREAQFLVGAGLVVVVTIALSIVACVVCHMKRKERREFRRKNEPVNGRARPVEYVDPWGSVARTFQNDG 673
            TF+RLEF +I   ++DF D  ST+  G+R  NTVLAAQ+EESG++  EAYTAEYSI  ENV  +D P V   IAG+G G GV+E G++I   TEAP A   D  DFTR+ QFLVGAGLVVVV+  LSIVAC+VCHMKR++R+EF+R+N+  +GR +PV YVDPWGSVARTFQ DG
Sbjct:   10 TFKRLEFRIIGDSDNDFPDITSTLSEGVRALNTVLAAQNEESGVSEVEAYTAEYSINSENVATADTPGVS--IAGSGGGTGVDEEGEVIVLATEAPEAADDDMGDFTRQTQFLVGAGLVVVVSFFLSIVACIVCHMKRRDRKEFKRRNQSEDGRPKPVAYVDPWGSVARTFQKDG 182          
BLAST of mRNA_A-nodosum_M_contig114.3.1 vs. uniprot
Match: A0A6H5L752_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L752_9PHAE)

HSP 1 Score: 204 bits (520), Expect = 4.950e-52
Identity = 112/228 (49.12%), Postives = 145/228 (63.60%), Query Frame = 0
Query:  230 YEAKVVRMTGPTSSDWNGAKYTLAVTTPVYQQSQKFGTIIGTGTVNETDEAPLTQDYDLERGCYQLYTTAGSRPYDVLWEVEVYDDDGEDDGVRDAAEGGGKDQQTFGVGGALCGLSTCYRTCYLDAEDARTNACASFGDLLAPLTEEAGAKCNCTSEEQLELRLACLSRG-CDESSQCYM-GNTDS-IGSASTLRITTYITTATNSIDEDAIGVALAQWLDFDPGYV 454
            Y+ ++V  TG TS       Y L V T V  QS    +++  GT+NE D +P TQ  +LERGCY LYTTAG+RPYDV+W+VEV         V   A GGGKD  +FG+GGALCG+S CYR CY + +D   + C SFGDLLAP  E AGA C CT +E+++LR+ CL R  C+  SQCY+ G+  + I +A TLRI  Y+T  T ++  D +  A+AQWLD DP YV
Sbjct:  683 YQVEIVASTGDTSXXXXXXXYRLEVGTVVPGQSLPSSSLLAFGTINEGDISPWTQTLNLERGCYVLYTTAGTRPYDVVWQVEVGGK------VYQNAAGGGKDYHSFGLGGALCGMSDCYRLCYEEHDDRDADECKSFGDLLAPSDEPAGANCTCTQDEEIDLRIECLGRDDCESRSQCYLLGDAAAEITTAPTLRIVMYVTIVTTNVYVDGMETAVAQWLDLDPAYV 904          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig114.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LHQ5_ECTSI4.890e-12750.64Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LPC9_9PHAE1.440e-5761.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L752_9PHAE4.950e-5249.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..62
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..97
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 669..710

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig114contigA-nodosum_M_contig114:74241..118614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig114.3.1mRNA_A-nodosum_M_contig114.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig114 71897..119151 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig114.3.1 ID=prot_A-nodosum_M_contig114.3.1|Name=mRNA_A-nodosum_M_contig114.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=711bp
MVLRRRSASLMAGLTLTTAATTASYRQETQPLMRRLPHQLDAYDGKEREE
GKALHGVGRGDRSERLTLSQASLPTSRENLRELSGGGSPGRSSADKVDLV
SSRGLNRWVRHDRGGFVDDLDPFESSSALTAVETWASETGPGALRDWLWR
PEEEGGRDTSEGEWTWEGALRGVWGVLSGSLGVSLEVEWHADDGEANAAE
VEALIGEEQRGRVQSYRRRLQTSSSSVVKYEAKVVRMTGPTSSDWNGAKY
TLAVTTPVYQQSQKFGTIIGTGTVNETDEAPLTQDYDLERGCYQLYTTAG
SRPYDVLWEVEVYDDDGEDDGVRDAAEGGGKDQQTFGVGGALCGLSTCYR
TCYLDAEDARTNACASFGDLLAPLTEEAGAKCNCTSEEQLELRLACLSRG
CDESSQCYMGNTDSIGSASTLRITTYITTATNSIDEDAIGVALAQWLDFD
PGYVQLTDIDGHETDTTSASSSNRRLEALDETLVEETLETTHHAVGRSLQ
TGTFRRLEFLVISSDESDFDDAMSTIDAGIRGFNTVLAAQDEESGLTTAE
AYTAEYSIGQENVPASDIPDVDGGIAGTGIGQGVNEFGDIIEGTEAPAAD
ATDFTREAQFLVGAGLVVVVTIALSIVACVVCHMKRKERREFRRKNEPVN
GRARPVEYVDPWGSVARTFQNDGDTNSTVNMKSGAGSTSNGSHFRSTNGS
YPHSANGSHA*
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