prot_A-nodosum_M_contig1136.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1136.4.1
Unique Nameprot_A-nodosum_M_contig1136.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length50
Homology
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BLAST of mRNA_A-nodosum_M_contig1136.4.1 vs. uniprot
Match: D7FYY9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY9_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 6.810e-9
Identity = 24/50 (48.00%), Postives = 33/50 (66.00%), Query Frame = 0 
Query:    1 MEAGVLQRQVENVIPQISWTPDFVRSLNDLIYGKQTEWETWGSGHLRSRE 50
            ++AG   + V +VIP  SWT  F +S   L+YGK T+WETWG GH+  R+
Sbjct:  127 LDAGEYFQLVTSVIPYESWTSPFHKSFYSLVYGKHTDWETWGKGHMTVRD 176
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1136.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYY9_ECTSI6.810e-948.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1136contigA-nodosum_M_contig1136:44622..45359 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1136.4.1mRNA_A-nodosum_M_contig1136.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1136 44622..45363 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1136.4.1 ID=prot_A-nodosum_M_contig1136.4.1|Name=mRNA_A-nodosum_M_contig1136.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=50bp
MEAGVLQRQVENVIPQISWTPDFVRSLNDLIYGKQTEWETWGSGHLRSRE
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