prot_A-nodosum_M_contig1136.14.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1136.14.1
Unique Nameprot_A-nodosum_M_contig1136.14.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length253
Homology
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5KP70_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP70_9PHAE)

HSP 1 Score: 273 bits (699), Expect = 2.370e-88
Identity = 130/218 (59.63%), Postives = 168/218 (77.06%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HWK+ALGIL ++  T   GIT++RG   G+ ++ F+      ASKATDRRSVSGG +MC G CV WFSRTQKC TLST+EAE+VA+ D +KE LFLRQVW FM+P  GMPC   FEDNQGA+Q++ NP++NS SKH+DVRHHF+RELV + +I + +VP+ +QHAD LTK ++ + FA+HR F MNL 
Sbjct:  107 LMWLATQTRPDIANAVRAVAR-YCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITNVPTPFQHADFLTKAISKESFALHRDFVMNLQ 321          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5L4G9_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4G9_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 6.560e-88
Identity = 130/218 (59.63%), Postives = 167/218 (76.61%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HWK+ALGIL ++  T   GIT++RG   G+ ++ F+      ASKATDRRSVSGG +MC G CV WFSRTQKC TLST+EAE+VA+ D +KE LFLRQVW FM+P   MPC   FEDNQGA+Q+  NP++NS SKH+DVRHHF+RELV + +I + HVP+++QHAD LTK ++ + FA+HR F MNL 
Sbjct:  162 LMWLATQTRPDIANAVRAVAR-YCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDASMPCIPVFEDNQGAIQIMHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTQFQHADFLTKAISKESFALHRDFVMNLQ 376          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5JEF2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=7 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEF2_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 1.650e-86
Identity = 129/218 (59.17%), Postives = 166/218 (76.15%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HWK+ALGIL ++  T   GIT++RG   G+ ++ F+      ASKATDRRSVSGG +MC G CV WFSRTQKC TLST+EAE+VA+ D +KE LFLRQVW FM+P  GMPC   FEDNQGA+Q++ NP++NS SKH+DVRHHF+RELV + +I + HVP+ +QHAD LTK ++ +   +HR F MNL 
Sbjct:  224 LMWLATQTRPDIANAVRAVAR-YCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKATDRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKEVLFLRQVWRFMLPDAGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVPTHFQHADFLTKAISKESLGLHRDFVMNLQ 438          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5KEZ8_9PHAE (Uncharacterized protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ8_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 3.300e-86
Identity = 133/218 (61.01%), Postives = 161/218 (73.85%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HW +A+ IL +   T  FGI++QRGT  G  L+ +       ASKA DRRSVSGG + C G  V WFSRTQKC TLST+EAE+VALG+ VK  LFLRQ+W FM+P  GMPC   FEDNQGA+QL++NP+SNS SKH+DVRHHFLRELV + +I V HVPS YQ AD LTK L+ D F  HR F MNL+
Sbjct:    2 LMWLATQTRPDIANAVRAVAR-YCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADF--ASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGEVVKVILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNLA 216          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5KPF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPF9_9PHAE)

HSP 1 Score: 264 bits (675), Expect = 2.590e-84
Identity = 135/218 (61.93%), Postives = 160/218 (73.39%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HW +A+GIL +   T   GI++QRGT  G  L+ +       ASKA DRRSVSGG + C G  V WFSRTQKC TLST+EA +VALGD VKE LFLRQVW FM+P  GMPC   FEDNQGA+QL++NP+SNS SKH+DVRHHFLRELV + +I V HVPS YQ AD LTK L  D F  HR F MNL+
Sbjct:  137 LMWLATQTRPDIANAVRAVAR-YCASPKRVHWDAAMGILGYAKRTSYMGISFQRGTVEGFSLQGYADADF--ASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAGYVALGDVVKEILFLRQVWRFMLPKVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKRLPKDAFESHRDFVMNLA 351          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 268 bits (684), Expect = 2.920e-84
Identity = 135/218 (61.93%), Postives = 161/218 (73.85%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HW +A+ IL +   T  FGI++QRGT  G  L+ +       ASKA DRRSVSGG + C G  V WFSRTQKC TLST+EAE+VALGD VKE LFLRQ+W FM+P  GMPC   FEDNQGA+QL++NP+SNS SKH+DVRHHFLRELV + +I V HVPS YQ AD LTK L  D F  HR F MNL+
Sbjct:  248 LMWLATQTRPDIANAVRAVAR-YCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADF--ASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPKDAFESHRDFVMNLA 462          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5L3H4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H4_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 2.930e-83
Identity = 126/213 (59.15%), Postives = 161/213 (75.59%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRF 246
            LM LA  TRPDI+NAVR++AR YC++PK +HWK+ALGIL ++  T   GIT++RG   G+ ++ F+      ASK  D RSVSGG +MC G CV WFSRTQKC TLST+EAE+VA  D +KE LFLRQVW FM+P  GMPC   FEDNQGA+Q++ NP++NS SKH+DVRHHF+RELV + +I + HV SE+QHAD LTK ++ + FA+HR F
Sbjct:  199 LMWLATQTRPDIANAVRAVAR-YCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADY--ASKGADCRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAFADVLKEVLFLRQVWRFMLPDTGMPCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISKESFALHRDF 408          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 263 bits (673), Expect = 6.730e-83
Identity = 128/218 (58.72%), Postives = 163/218 (74.77%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK IHW++ LGIL ++  T   GIT++RG+  G+ ++ F+      ASKA DRRSVSGG +MC G C+ WFSRTQKC TLST+EAE+V+L D +KE LFLRQVW FM+P  GMPC   FEDNQGA+QL++NP+SNS SKH+DVRHHF+RELV + +I + HV S YQHAD LTK L    F  HR + M++ 
Sbjct:  224 LMWLATQTRPDIANAVRAVAR-YCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADY--ASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVGRKEISIFHVESAYQHADFLTKALHAGDFEFHRNYVMSMD 438          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5KRB4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRB4_9PHAE)

HSP 1 Score: 259 bits (662), Expect = 9.130e-83
Identity = 131/218 (60.09%), Postives = 159/218 (72.94%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNLS 251
            LM LA  TRPDI+NAVR++AR YC++PK +HW +A+ IL +   T  FGI++QRGT  G  L+ +       ASKA DRRSVSGG + C G  V WFSRTQKC TLST+EAE+VALGD VKE LFLRQ+W F +P  GMPC   FED QG +QL++NP+SNS SKH++VRHHFLRELV + +I V HVPS YQ AD LTK L+ D F  HR F MNL+
Sbjct:  106 LMWLATQTRPDIANAVRAVAR-YCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADF--ASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFTLPQVGMPCIPVFEDIQGVIQLAQNPISNSNSKHINVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSKDAFESHRDFVMNLA 320          
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Match: A0A6H5KBS9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBS9_9PHAE)

HSP 1 Score: 270 bits (690), Expect = 1.430e-82
Identity = 129/217 (59.45%), Postives = 167/217 (76.96%), Query Frame = 0
Query:   34 LMGLAISTRPDISNAVRSLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLPTQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALGDTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHVDVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNL 250
            LM LA  TRPDI+NAVR++AR YC++P+ +HWK+ALGIL ++  T   GIT++RG   G+ L+ F+      ASKA DRRSVSGG +MC G CV WFSRTQKC TLST+EAE+VA+ D +K  LFLRQ W FM+P  GMPC   FEDNQGA+Q+++NP++NS SKH+DVRHHF+RELV++ +I + HV SE+QHAD LTK ++ + FA+HR F MNL
Sbjct:   51 LMWLATQTRPDIANAVRAVAR-YCASPQMVHWKAALGILGYVRWTSWMGITFERGVVTGMSLQVFVDADY--ASKAADRRSVSGGLVMCGGGCVTWFSRTQKCVTLSTTEAEYVAIADVLKGVLFLRQGWRFMLPDAGMPCIPVFEDNQGAIQIAQNPITNSNSKHIDVRHHFIRELVMRKEISITHVTSEFQHADFLTKAISKESFALHRYFVMNL 264          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1136.14.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KP70_9PHAE2.370e-8859.63Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L4G9_9PHAE6.560e-8859.63Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JEF2_9PHAE1.650e-8659.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KEZ8_9PHAE3.300e-8661.01Uncharacterized protein n=4 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KPF9_9PHAE2.590e-8461.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JFG2_9PHAE2.920e-8461.93Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3H4_9PHAE2.930e-8359.15Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JLN0_9PHAE6.730e-8358.72Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KRB4_9PHAE9.130e-8360.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KBS9_9PHAE1.430e-8259.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11439:SF343SUBFAMILY NOT NAMEDcoord: 180..245
NoneNo IPR availablePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 180..245
NoneNo IPR availableCDDcd09272RNase_HI_RT_Ty1coord: 111..235
e-value: 2.31599E-43
score: 141.837

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1136contigA-nodosum_M_contig1136:129781..130539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1136.14.1mRNA_A-nodosum_M_contig1136.14.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1136 129454..130706 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1136.14.1 ID=prot_A-nodosum_M_contig1136.14.1|Name=mRNA_A-nodosum_M_contig1136.14.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=253bp
MKRIKLQIADRSVDRCQDRMLGGVSIFVMWDTCLMGLAISTRPDISNAVR
SLARWYCSAPKAIHWKSALGILAHINDTCGFGITYQRGTSVGIFLKSFLP
TQTMPASKATDRRSVSGGTIMCVGACVCWFSRTQKCATLSTSEAEHVALG
DTVKEFLFLRQVWCFMIPGKGMPCFSAFEDNQGALQLSKNPVSNSYSKHV
DVRHHFLRELVLQGDIIVNHVPSEYQHADTLTKVLAFDLFAIHRRFFMNL
SD*
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