prot_A-nodosum_M_contig113.83.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.83.1
Unique Nameprot_A-nodosum_M_contig113.83.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length361
Homology
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BLAST of mRNA_A-nodosum_M_contig113.83.1 vs. uniprot
Match: D7G1B2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1B2_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 3.470e-18
Identity = 83/194 (42.78%), Postives = 96/194 (49.48%), Query Frame = 0 
Query:  191 PLNEPWPLDRE----SRAGSAAQLPPRSVREASDASSTMSTAHTLLAMVTPRAWRS---------GEW-VSTEDGERAGTGDTADGDDEPNGICYTAAYKGDEEET-----IAESLASDDAY--GDVFATAAPSPVS--LKLPTLIAGSSTIVTHSTLGRMERALSKFHRGYNWYLLFSTYRDGASYATMYNNI 361
            P  E W   RE    + A +AAQ   R V E +      STA   L+MV P  WRS         GE  V   DG R   G +      P G        G  EET     I  SLA D +   GD     +P P    L+LP L+ G STIVTH+TL RME A  K HRGYNWYLL+ST+RDGASY T+YN I
Sbjct:  307 PPAEMWAGTREDPGNAAAFAAAQSAARDVSEVAQ-----STAQAFLSMVKPSYWRSDSEGGGGPAGESPVGFGDGRRGERGGSDRWVSVPGGA-------GSFEETASSGPILHSLADDASLFPGDPGVRPSPPPAEAPLQLPGLVCGGSTIVTHTTLARMEAAQPKHHRGYNWYLLYSTFRDGASYTTLYNRI 488
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.83.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1B2_ECTSI3.470e-1842.78Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..49
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 242..266
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 192..228
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 92..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:716009..719292 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.83.1mRNA_A-nodosum_M_contig113.83.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 716008..719292 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.83.1 ID=prot_A-nodosum_M_contig113.83.1|Name=mRNA_A-nodosum_M_contig113.83.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=361bp
IPNDQTAVITGADAEDAVTVTATATENAAGASSPAPRLDVQPHPEGDEVT
NALRPALAATAGNSVGFPALKTVAPTSVTTIATANSFSGVAAPQGEEDLG
STDGVDLEAATPSGETDNPQLDELVISRAFGQPSDASSSSAATTGVSIRN
ALRFMFSPSPSVASKGGCEILSENSSSNAVAIDNGAIIQPPLNEPWPLDR
ESRAGSAAQLPPRSVREASDASSTMSTAHTLLAMVTPRAWRSGEWVSTED
GERAGTGDTADGDDEPNGICYTAAYKGDEEETIAESLASDDAYGDVFATA
APSPVSLKLPTLIAGSSTIVTHSTLGRMERALSKFHRGYNWYLLFSTYRD
GASYATMYNNI
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