prot_A-nodosum_M_contig113.54.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.54.1
Unique Nameprot_A-nodosum_M_contig113.54.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length90
Homology
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: D8LG75_ECTSI (HELICc2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG75_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 1.380e-43
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MEEYDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            MEEYDA+IE+TGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMD KV+LKKKYMSE+ LPPGV RVTG EWYQQQA
Sbjct:   69 MEEYDAKIENTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPGVARVTGNEWYQQQA 150          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A6H5KW94_9PHAE (HELICc2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW94_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 8.780e-42
Identity = 74/82 (90.24%), Postives = 78/82 (95.12%), Query Frame = 0
Query:    1 MEEYDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            MEEYDA+IE+TGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMD KV+LKKKYMSE+ LPPGV RVTG EWYQQQA
Sbjct:  142 MEEYDAKIENTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDPKVVLKKKYMSESLLPPGVARVTGDEWYQQQA 223          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A836CNR1_9STRA (Helicase C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNR1_9STRA)

HSP 1 Score: 110 bits (275), Expect = 2.950e-26
Identity = 50/90 (55.56%), Postives = 64/90 (71.11%), Query Frame = 0
Query:    1 MEEYDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQ-QARGIGFCL 89
            M  Y+  + + GGA F AVCRGK+SEGMDFSD +ARCVV+TGIPYAP  D KV+LK++YM E P P G  +++G EWY Q  AR +   +
Sbjct:  596 MRAYEDALAARGGAAFFAVCRGKLSEGMDFSDDKARCVVITGIPYAPVKDPKVMLKRQYMDETPAPQGCAKLSGSEWYAQCAARAVNQAI 685          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: W7U1C1_9STRA (DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1C1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 7.200e-23
Identity = 50/84 (59.52%), Postives = 60/84 (71.43%), Query Frame = 0
Query:    4 YDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYM-----SEAPLPPGVQRVTGQEWYQQQA 82
            YD  I+  GGA+ LAVCRGKVSEGMDF+D RAR VV+TGIP+ PA D +V LKK Y+     S A +P  +Q + G EWYQQQA
Sbjct:  674 YDGAIKEEGGAILLAVCRGKVSEGMDFADQRARAVVITGIPFPPARDPRVGLKKMYLDSLASSPASVPSSIQPLRGMEWYQQQA 757          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A5D6XGF1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XGF1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 6.310e-22
Identity = 45/83 (54.22%), Postives = 61/83 (73.49%), Query Frame = 0
Query:    1 MEEYDARIES-TGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            ++EY   I + T GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P  D K++LKK  + EA +PPG  ++TG +WY QQA
Sbjct:  600 VDEYHEAIRTNTNGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIVLKKSILDEAVVPPGELKLTGNQWYIQQA 682          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: K3WZ70_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZ70_GLOUD)

HSP 1 Score: 96.7 bits (239), Expect = 2.190e-21
Identity = 45/83 (54.22%), Postives = 60/83 (72.29%), Query Frame = 0
Query:    1 MEEYDARIES-TGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            ++EY   I++ T GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P  D K+ILKK  + E  +PPG  ++TG  WY QQA
Sbjct:  558 VDEYHETIKTNTNGAVFFAVCRGKVSEGIDFSNDKGRAVVITGLPFPPTKDPKIILKKSILDEVVVPPGELKLTGNHWYIQQA 640          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: T0QEW6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QEW6_SAPDV)

HSP 1 Score: 96.3 bits (238), Expect = 2.970e-21
Identity = 42/79 (53.16%), Postives = 59/79 (74.68%), Query Frame = 0
Query:    4 YDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            +D    S  GA+F+AVCRGKVSEG+DFS+   R VV+TG+P+AP  D K++LKK+++ +A +PPG  ++TG  WY QQA
Sbjct:  570 HDDIKSSPQGAIFMAVCRGKVSEGIDFSNENGRAVVITGLPFAPIKDPKIVLKKEFLDQAIVPPGESKLTGNNWYVQQA 648          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A2P4YET9_9STRA (DNA helicase n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YET9_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 4.070e-21
Identity = 44/81 (54.32%), Postives = 58/81 (71.60%), Query Frame = 0
Query:    2 EEYDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            E + A  ++  GAVF AVCRGKVSEG+DFS+ + R VV+TG+P+ P  D K+ILKK  + EA +PPG  ++TG  WY QQA
Sbjct:  580 EYHQAITDNPKGAVFFAVCRGKVSEGIDFSNNKGRAVVITGLPFPPTKDPKIILKKSILDEAVVPPGELKLTGNAWYIQQA 660          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A6J8D5K6_MYTCO (Regulator of telomere elongation helicase 1 homolog n=2 Tax=Mytilus TaxID=6548 RepID=A0A6J8D5K6_MYTCO)

HSP 1 Score: 95.9 bits (237), Expect = 4.080e-21
Identity = 41/73 (56.16%), Postives = 56/73 (76.71%), Query Frame = 0
Query:   10 STGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            S  GA+F+AVCRGKVSEG+DF+D   R VV+TG+PY P MD +V+LK +Y+ E    P ++ +TG+EWY+QQA
Sbjct:  625 SLNGAIFVAVCRGKVSEGLDFADENGRAVVITGLPYPPYMDPRVVLKMQYLDEVKRRPNIKHLTGKEWYRQQA 697          
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Match: A0A067CQI1_SAPPC (Helicase ATP-binding domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CQI1_SAPPC)

HSP 1 Score: 95.5 bits (236), Expect = 5.430e-21
Identity = 40/70 (57.14%), Postives = 56/70 (80.00%), Query Frame = 0
Query:   13 GAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMDAKVILKKKYMSEAPLPPGVQRVTGQEWYQQQA 82
            GA+F+AVCRGKVSEG+DFS+   R VV+TG+P+AP  D K++LKK+++ +A +PPG  ++TG  WY QQA
Sbjct:  534 GAIFMAVCRGKVSEGIDFSNENGRAVVITGLPFAPIKDPKIVLKKEFLDQAIVPPGESKLTGNNWYVQQA 603          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LG75_ECTSI1.380e-4390.24HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KW94_9PHAE8.780e-4290.24HELICc2 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A836CNR1_9STRA2.950e-2655.56Helicase C-terminal domain-containing protein n=1 ... [more]
W7U1C1_9STRA7.200e-2359.52DNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A5D6XGF1_9STRA6.310e-2254.22Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3WZ70_GLOUD2.190e-2154.22Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
T0QEW6_SAPDV2.970e-2153.16Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]
A0A2P4YET9_9STRA4.070e-2154.32DNA helicase n=1 Tax=Phytophthora palmivora var. p... [more]
A0A6J8D5K6_MYTCO4.080e-2156.16Regulator of telomere elongation helicase 1 homolo... [more]
A0A067CQI1_SAPPC5.430e-2157.14Helicase ATP-binding domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..84
e-value: 1.1E-23
score: 85.8
IPR006555ATP-dependent helicase, C-terminalPFAMPF13307Helicase_C_2coord: 2..82
e-value: 5.8E-20
score: 72.2
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 1..82
NoneNo IPR availablePANTHERPTHR11472:SF47FANCONI ANEMIA GROUP J PROTEINcoord: 1..82

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:495690..497361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.54.1mRNA_A-nodosum_M_contig113.54.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 495684..497361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.54.1 ID=prot_A-nodosum_M_contig113.54.1|Name=mRNA_A-nodosum_M_contig113.54.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=90bp
MEEYDARIESTGGAVFLAVCRGKVSEGMDFSDGRARCVVVTGIPYAPAMD
AKVILKKKYMSEAPLPPGVQRVTGQEWYQQQARGIGFCL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006555ATP-dep_Helicase_C
IPR045028DinG/Rad3-like