prot_A-nodosum_M_contig113.46.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.46.1
Unique Nameprot_A-nodosum_M_contig113.46.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length127
Homology
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A6H5LCY1_9PHAE (Helicase ATP-binding domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCY1_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.220e-41
Identity = 81/128 (63.28%), Postives = 94/128 (73.44%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAY-EQTVTDLSRPR---QPKQNGTANVSGRPALPSVVIYASRTHSQLSQ 124
            MP+ +I GT V FPF PYDCQL YI GV+ ALN SKNALLESPTGTGKTLCLL ASLAWQQ+N++ +  +P     T+LAY E+ VTDLSRPR   QP Q      +   A+PSV+IYASRTHSQL Q
Sbjct:    1 MPTLEIGGTSVAFPFNPYDCQLEYIGGVLEALNGSKNALLESPTGTGKTLCLLTASLAWQQRNSAMVASKPAP---TQLAYDERPVTDLSRPRHEQQPYQENKPTTAA--AMPSVIIYASRTHSQLGQ 123          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A183RL02_9TREM (Helicase ATP-binding domain-containing protein n=2 Tax=Schistosoma TaxID=6181 RepID=A0A183RL02_9TREM)

HSP 1 Score: 107 bits (266), Expect = 2.100e-26
Identity = 61/130 (46.92%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTV-----TDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQA 125
            MP   IDG  + FP++PYDCQ  Y+  V+ +LNE K+A+LESPTGTGKTLCLLCASLAW  K A++++       AT+  ++ T+     +D        QN  A++ G+      +IYASRTHSQL+QA
Sbjct:    1 MPHIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQ----LISATDTKHQNTMGKRPTSDNVDNALSHQNFLASL-GKVNNGCKIIYASRTHSQLAQA 125          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A183JF72_9TREM (Helicase ATP-binding domain-containing protein n=1 Tax=Schistosoma curassoni TaxID=6186 RepID=A0A183JF72_9TREM)

HSP 1 Score: 105 bits (262), Expect = 7.760e-26
Identity = 57/125 (45.60%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQA 125
            MP   IDG  + FP++PYDCQ+ Y+  V+ +LNE K+A+LESPTGTGKTLCLLCASLAW  K A++++          +    T  ++       QN  A++ G+      +I+ASRTHSQL+QA
Sbjct:    1 MPQIAIDGVEIDFPYQPYDCQIEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLNKQANSVQSITNAKHQNTMGKRPTSDNVDNTLS-HQNFLASL-GKVNNGCKIIFASRTHSQLAQA 123          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A2H1BVS3_FASHE (Helicase ATP-binding domain-containing protein n=1 Tax=Fasciola hepatica TaxID=6192 RepID=A0A2H1BVS3_FASHE)

HSP 1 Score: 100 bits (250), Expect = 4.640e-25
Identity = 57/125 (45.60%), Postives = 76/125 (60.80%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQA 125
            MP+ +I G  + FP +PY CQ+ Y++ ++TALN S+NA+LESPTGTGKTLCLLC SLAW    +S +  +      T+   E   T+L                RP L + VI+ASRTHSQL+QA
Sbjct:    1 MPTVNISGVGIEFPHEPYPCQVEYMKELLTALNNSQNAILESPTGTGKTLCLLCTSLAWISSISSGVSLRNPSRRETDPFVEVETTEL----------------RPPL-AKVIFASRTHSQLAQA 108          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: UPI00022DC59C (putative regulator of telomere elongation helicase 1 rtel1 n=1 Tax=Schistosoma mansoni TaxID=6183 RepID=UPI00022DC59C)

HSP 1 Score: 107 bits (267), Expect = 1.540e-24
Identity = 61/130 (46.92%), Postives = 83/130 (63.85%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTV-----TDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQA 125
            MP   IDG  + FP++PYDCQ  Y+  V+ +LNE K+A+LESPTGTGKTLCLLCASLAW  K A++++       AT+  ++ T+     +D        QN  A++ G+      +IYASRTHSQL+QA
Sbjct:    1 MPQIAIDGVEIDFPYQPYDCQFEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQ----LISATDAKHQNTMGKRPTSDNVDNALSHQNFLASL-GKVNNGCKIIYASRTHSQLAQA 125          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A3R6XJV3_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R6XJV3_9STRA)

HSP 1 Score: 101 bits (252), Expect = 3.140e-24
Identity = 62/129 (48.06%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQ-----QKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQ 124
            MP+  I G PV FPF PYD Q+ Y+  VI +L   +NALLESPTGTGKTLCLLCA+LAW+     Q  A++ +P+        + YE T    S+P     N    V+ +  LP + IYASRTHSQL Q
Sbjct:    1 MPTLQIGGIPVSFPFTPYDSQVVYMEKVIQSLEFKQNALLESPTGTGKTLCLLCATLAWRLHRLKQLRAASNKPK--------VQYETTT---SKPDDTDDNDDQGVADK--LPKI-IYASRTHSQLKQ 115          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A8J9RSI3_9CHLO (Regulator of telomere elongation helicase 1 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RSI3_9CHLO)

HSP 1 Score: 105 bits (263), Expect = 5.350e-24
Identity = 61/128 (47.66%), Postives = 81/128 (63.28%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTVTDLSRPR---QPKQNGTANV-SGRPALPSVVIYASRTHSQLSQ 124
            MP++ + G  V FP + Y+CQ+TY+  VITAL E KNALLESPTGTGKTLCLLCA+LAWQ+ +  A +       A++  +E  V      +   Q    G A++ S  P+    +IYASRTHSQL+Q
Sbjct:    1 MPTYTLRGIEVQFPHEAYECQVTYMEKVITALQEGKNALLESPTGTGKTLCLLCATLAWQE-SLKAAKAAAAAQAASKTCFEGEVEPGHSNKSWAQMTAEGLASLHSSEPSAIPTIIYASRTHSQLAQ 127          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A6A4Z8D8_9STRA (Helicase ATP-binding domain-containing protein n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4Z8D8_9STRA)

HSP 1 Score: 102 bits (255), Expect = 6.910e-24
Identity = 63/129 (48.84%), Postives = 78/129 (60.47%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQ-----QKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQ 124
            MP+  I G PV FPF PYD Q+ Y+  VI +L   +NALLESPTGTGKTLCLLCA+LAW+     Q  A++ +P+        + YE T    SRP     N    V+ +  LP + IYASRTHSQL Q
Sbjct:    1 MPTLQIGGIPVSFPFTPYDSQVVYMEKVIQSLEFKQNALLESPTGTGKTLCLLCATLAWRLHRLKQLRAASNKPK--------VQYETTT---SRPDDTDDNDDQGVADK--LPKI-IYASRTHSQLKQ 115          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A095C263_SCHHA (Regulator of telomere elongation helicase 1 n=5 Tax=Schistosoma TaxID=6181 RepID=A0A095C263_SCHHA)

HSP 1 Score: 105 bits (262), Expect = 7.290e-24
Identity = 57/125 (45.60%), Postives = 79/125 (63.20%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQQKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQA 125
            MP   IDG  + FP++PYDCQ+ Y+  V+ +LNE K+A+LESPTGTGKTLCLLCASLAW  K A++++          +    T  ++       QN  A++ G+      +I+ASRTHSQL+QA
Sbjct:    1 MPQIAIDGVEIDFPYQPYDCQIEYMTKVLLSLNEGKHAILESPTGTGKTLCLLCASLAWLDKQANSVQSITNAKHQNTMGKRPTSDNVDNTLS-HQNFLASL-GKVNNGCKIIFASRTHSQLAQA 123          
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Match: A0A484EEU3_BRELC (Helicase ATP-binding domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EEU3_BRELC)

HSP 1 Score: 102 bits (253), Expect = 1.000e-23
Identity = 63/127 (49.61%), Postives = 75/127 (59.06%), Query Frame = 0
Query:    1 MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTLCLLCASLAWQ---QKNASAMEPQPXXXPATELAYEQTVTDLSRPRQPKQNGTANVSGRPALPSVVIYASRTHSQLSQ 124
            M S D+ G PV FPF PYD Q+ Y+  V+ AL   +NA+LESPTGTGKTLCLLCA+LAW+   QK   A        P+T LAYE    D       K+N T        LP + IY+SRTHSQL Q
Sbjct:    1 MVSLDVCGIPVEFPFPPYDSQIIYMEKVLLALMSKQNAILESPTGTGKTLCLLCATLAWRRELQKKLRASNLSLTKRPSTLLAYEGYEID-------KENETQQ------LPRI-IYSSRTHSQLKQ 113          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.46.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LCY1_9PHAE1.220e-4163.28Helicase ATP-binding domain-containing protein n=1... [more]
A0A183RL02_9TREM2.100e-2646.92Helicase ATP-binding domain-containing protein n=2... [more]
A0A183JF72_9TREM7.760e-2645.60Helicase ATP-binding domain-containing protein n=1... [more]
A0A2H1BVS3_FASHE4.640e-2545.60Helicase ATP-binding domain-containing protein n=1... [more]
UPI00022DC59C1.540e-2446.92putative regulator of telomere elongation helicase... [more]
A0A3R6XJV3_9STRA3.140e-2448.06Helicase ATP-binding domain-containing protein n=1... [more]
A0A8J9RSI3_9CHLO5.350e-2447.66Regulator of telomere elongation helicase 1 n=1 Ta... [more]
A0A6A4Z8D8_9STRA6.910e-2448.84Helicase ATP-binding domain-containing protein n=1... [more]
A0A095C263_SCHHA7.290e-2445.60Regulator of telomere elongation helicase 1 n=5 Ta... [more]
A0A484EEU3_BRELC1.000e-2349.61Helicase ATP-binding domain-containing protein n=1... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 14..126
e-value: 1.1E-16
score: 62.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 7..59
IPR006935Helicase/UvrB, N-terminalPFAMPF04851ResIIIcoord: 15..63
e-value: 3.6E-5
score: 23.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 64..104
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 82..104
NoneNo IPR availablePANTHERPTHR11472:SF34REGULATOR OF TELOMERE ELONGATION HELICASE 1coord: 6..125
IPR045028Helicase superfamily 1/2, DinG/Rad3-likePANTHERPTHR11472DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBERcoord: 6..125
IPR014013Helicase superfamily 1/2, ATP-binding domain, DinG/Rad3-typePROSITEPS51193HELICASE_ATP_BIND_2coord: 7..127
score: 12.285756

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:486757..488548 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.46.1mRNA_A-nodosum_M_contig113.46.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 486757..488548 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.46.1 ID=prot_A-nodosum_M_contig113.46.1|Name=mRNA_A-nodosum_M_contig113.46.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=127bp
MPSFDIDGTPVVFPFKPYDCQLTYIRGVITALNESKNALLESPTGTGKTL
CLLCASLAWQQKNASAMEPQPPPPPATELAYEQTVTDLSRPRQPKQNGTA
NVSGRPALPSVVIYASRTHSQLSQART
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR006935Helicase/UvrB_N
IPR045028DinG/Rad3-like
IPR014013Helic_SF1/SF2_ATP-bd_DinG/Rad3