prot_A-nodosum_M_contig113.23.2 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.23.2
Unique Nameprot_A-nodosum_M_contig113.23.2
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length414
Homology
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A6H5JPC1_9PHAE (TFIIE beta domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPC1_9PHAE)

HSP 1 Score: 587 bits (1512), Expect = 1.440e-207
Identity = 305/418 (72.97%), Postives = 348/418 (83.25%), Query Frame = 0
Query:    1 MKSSHHEQRHLTGGAPSSSTPWLGGSGALGA-GSSAFFKEPEKKTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEAVNEEDPLQETAFTYMAKYAVSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSETVGNQTQRTAAPPSVTMNADLKLRVTDTYAEAMGAPTETDEDDRTVTIGR---QLPAKDAAEMKHPLPVNGVFEGDGAFEGRAVRHGCCKALRELWKETRAMVPQDPAELHQVMFQKKLTTSRDVGTFKRPKRKVDDGSAKRERRRLKRLMKRQKTARAYKAVTNTHLENTLIGRLLQGDG-GGGDRGGL 413
            MKSSHHEQR         STPWLGGSGA+GA G+ A  KEPEKK++AE  ADVV++LKRR Q GKGPATITEISD TDVDLRKGRD+ VLEML ANPKVEA++++DPLQETAFTYMAKYAV+N+ ELL LI+RCKGGICWEEL+DTY++V  DM AM+E G+VIA+ N+ETHKMNLYPRGDVFLTELPG +RI+PGS VA T EDMN HIRRGEAVR+SGQWFRVSSETVGNQT R+AAP +VTMNADL +R TD +AE MGAP E   D+ + TIGR   Q  AK   E ++PLP+NGV+ GD  FEGRAVRHGCCK+LRELW+ETRAMVP DPAELHQ+MF+K LT+S D   FK+PKRKVDDGSAKRERRRLKRL KRQKTAR YK +TNTHLE T IG+LL+G G  GGDRGGL
Sbjct:   12 MKSSHHEQRLPXXXXXXXSTPWLGGSGAVGATGAFAHTKEPEKKSDAELQADVVDFLKRRLQLGKGPATITEISDGTDVDLRKGRDEHVLEMLMANPKVEALHDQDPLQETAFTYMAKYAVTNKSELLQLINRCKGGICWEELKDTYSSVEGDMKAMQEAGKVIAVVNKETHKMNLYPRGDVFLTELPGSIRIKPGSEVAMTTEDMNQHIRRGEAVRISGQWFRVSSETVGNQTLRSAAPLTVTMNADLSVRKTDVFAEDMGAPVE---DEGSATIGRVQQQWSAKGKVEPQYPLPLNGVYGGDTEFEGRAVRHGCCKSLRELWRETRAMVPGDPAELHQLMFKKNLTSSTDTSAFKKPKRKVDDGSAKRERRRLKRLAKRQKTARTYKTITNTHLEGTTIGKLLEGAGTSGGDRGGL 426          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: D7FZN3_ECTSI (TFIIE beta domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZN3_ECTSI)

HSP 1 Score: 375 bits (963), Expect = 1.090e-126
Identity = 191/252 (75.79%), Postives = 217/252 (86.11%), Query Frame = 0
Query:    1 MKSSHHEQRHLTGGAPSSSTPWLGGSGALGA-GSSAFFKEPEKKTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEAVNEEDPLQETAFTYMAKYAVSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSETVGNQTQRTAAPPSVTMNADLKLR 251
            MKSSHHEQR         STPWLGGSGA+GA G+ A  KEPEKK++AE  ADVV++LKRR Q GKGPATITEISD TDVDLRKGRD+ VLEML ANPKVEA+++EDPLQETAFTYMAKYAV+N+ ELL LI+RCKGGICWEEL+DTY++V  DM AM+E G+VIA+ N+ETHKMNLYPRGDVFLTELPG +RI+PGS VA T EDMN HIRRGEAVR+SGQWFRVSSETVGNQT R+AAP +VTMNADL +R
Sbjct:   12 MKSSHHEQRLPXXXXXXXSTPWLGGSGAVGAAGAFAHTKEPEKKSDAELQADVVDFLKRRLQLGKGPATITEISDGTDVDLRKGRDEHVLEMLVANPKVEALHDEDPLQETAFTYMAKYAVTNKSELLQLINRCKGGICWEELKDTYSSVEGDMKAMQEAGKVIAVVNKETHKMNLYPRGDVFLTELPGSIRIKPGSEVALTAEDMNQHIRRGEAVRISGQWFRVSSETVGNQTLRSAAPLTVTMNADLSVR 263          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A836C8F9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8F9_9STRA)

HSP 1 Score: 207 bits (527), Expect = 2.460e-59
Identity = 158/403 (39.21%), Postives = 204/403 (50.62%), Query Frame = 0
Query:   22 WLGG---SGALG-----AGSSAFF---------KEPEKKTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEAVNEEDPLQETAFTYMAKYAVSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSET----VGNQTQRTAAPPSVTMNADLKLRVTDTYAEAMGAPTETDEDDRTVTIGRQLPAKDAAEMKHPLPVNGVFEGDGAFEGRAVRHGCCKALRELWKETRAMVPQDP-AELHQVMFQKKLTTSRDVGTFKRPKRKVDDGSAKRERRRLKRLMKRQKTARAYKAVTNTHLENTLIGRLLQ 402
            WLGG   +G LG     +GSS  F             +K+  E+ ADV+EYLK      + P +  +I  AT VDL +G D EV EML+ANPKV      D +++  + Y AKY  S +  LL LI+RC  G+   EL DTY   A DM  M   G VIAI+++E   + LYPRG  FLT L G VRI PG  VA T   +   +RRGEAVR+  +W RVS E     +  Q  R A P SV  + DL  R  + YA+  G    T            LP + A          G     G ++G AVRHGC + +R LW ET   VP+D  A LHQ++FQ  L TS   G  +RPKR       +RE +R K   KR+        +TN HL+ T IG L++
Sbjct:    6 WLGGGHGTGVLGREDGLSGSSFLFGLGXXXXXXXXVRQKSAPEKQADVLEYLK--DMPDRRPVSAADILVATGVDL-EGADAEVKEMLSANPKV------DIMEDGRYMYQAKYIASGRAALLSLIERCLSGVNRAELVDTYEGAARDMEDMIRGGEVIAIKHKEHGTVLLYPRGATFLTRLSGAVRIGPGERVATTSAPLAAELRRGEAVRIGDRWARVSCEVSTAPLDRQPARAAVPESVATDRDLSDR--NVYAQPFGPEDLT------------LPLQTAPLPYAAAAAAGPGAPSGVYQGPAVRHGCSQRVRALWHETLQQVPKDDDAALHQMLFQAGLVTSAATGQQRRPKRFAQLTPEQRESQRSK--QKRRIAVVKNAKLTNDHLDGTAIGILME 383          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: W4GDG0_9STRA (TFIIE beta domain-containing protein n=8 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GDG0_9STRA)

HSP 1 Score: 124 bits (311), Expect = 3.920e-28
Identity = 114/380 (30.00%), Postives = 168/380 (44.21%), Query Frame = 0
Query:   43 KTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEAVNEEDPLQETAFTYMAKYAVSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSS--ETVGNQTQRTA-----APPSVTMNADLKLRVTDTYAEAMG-----APTETDEDDRTVTIGRQLPAKDAAEMKHPLPVNGVFEGDGAFEGRAVRHGCCKALRELWKETRAMVPQDPAELHQVMFQKKLTTS--RDVGTFKRPKRKVDDGSAKRERRRLKRLMKRQKTARAYKAVTNTHLENTLIGRLLQGDGGGG 408
            +T   R   V+EYL   + +     T+ +I   T +DL    + EV E +  NPKV        ++   F Y AK+ +  + ++L  ++R   GI + +L+D Y  V  D+  +   G VI I N E      YPRG  FL EL G   +E G  +  T+ED+   IRRG+A+++  QWFRVS+  +T G  +Q           SV+   DL L  +      +       P +T   D    I   L   DAA    P P  G+           ++HGC   +R+LW++T    P D   L + + Q  L T    +    +   RKV  G         K++M RQ+  R  K +TNTHL  T +G  L   G  G
Sbjct:   34 ETVVGRLQKVLEYL--NSIANHAAVTVPQIYQKTGIDLASPGEYEVCERVRNNPKVR-------IEGDKFAYKAKFDIKTRADVLRQLNRSPEGIPFRDLKDCYKNVEDDLRDLTRIGTVICIRNTEDGNDVYYPRGGQFLVELSGSGLVEHGCFIVATKEDITSEIRRGDAIKVGDQWFRVSAAPKTGGGSSQPQTFMAGMTSKSVSSVRDLNLSASKKTRYHLNFDSGHVPLDTAFPDPRGNIPL-LQRWDAA----PKPGRGLTVP-------LLKHGCTNDVRQLWRDTLRDWPADRLSLERKLLQCGLMTRDMHEANMHRSKMRKVHGGKGN------KKVM-RQRKQRDIK-ITNTHLVGTALGEALAKGGNDG 384          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A2P4XVP3_9STRA (TFA2_Winged_2 domain-containing protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XVP3_9STRA)

HSP 1 Score: 116 bits (290), Expect = 4.990e-26
Identity = 87/295 (29.49%), Postives = 138/295 (46.78%), Query Frame = 0
Query:  116 AKYAVSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSETVGNQTQRTA-----APPSVTMNADLKLRVTDTYA---EAMGAPTETDEDDRTVTIGRQLPAKDAAEMKHPLPVNGVFEGDGAFEGRAVRHGCCKALRELWKETRAMVPQDPAELHQVMFQKKLTTSRDVGTFKRPKRKVDDGSAKRERRRLKRLMKRQKTARAYKA-VTNTHLENTLIGRLL 401
            AKY + N+ +LL ++DR   G+  E+L D Y  V  D+  +  TG +I ++N +      Y RG  FL +L G   +E GS +A + +D+   IRRG+A+R+   WFRVS+    + T R       A  SV+   DL +     Y    +    P +    D      R + + D  ++   LP  G        + + V++GC   +R+LW++T    P D AE  + + Q  LTT   V           D S ++ +RRLK   K+ +  +     +TN HL  T +G +L
Sbjct:    1 AKYDIKNKVQLLKILDRIPEGMPIEDLIDCYVGVEDDLKELTRTGEIICLKNADKGAEVYYSRGPTFLVDLSGVATVEAGSYLAHSSQDLTGEIRRGDALRVGDNWFRVSAAVKSSSTTRPTPFAGMATKSVSSTRDLNVSKKIKYMFKFDTEHLPLDVPFPDAK---RRNVASSDRWDL---LPRRGP-------KFQMVKYGCSNDIRQLWRDTMRTWPSDRAEFEKKLVQAGLTTQAKV-----------DASRRQMKRRLKEDKKKNRPRKQRDIKITNHHLIGTKLGEIL 271          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: B8C9R6_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9R6_THAPS)

HSP 1 Score: 119 bits (299), Expect = 9.520e-26
Identity = 87/254 (34.25%), Postives = 121/254 (47.64%), Query Frame = 0
Query:   43 KTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKG-RDDEVLEMLTANPKVEAVNEEDPLQETA----FTYMAKYA-VSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRI---------------EP-------------------GSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSET-----VGNQTQRTAAPPSVTMNADLKLR 251
            K++ E+ ADV+ +L+    SG  P T+  I  +  +DL +G RDD V +ML +NPKV      DP   T     F Y AK++ V ++  LL  I+RCK G+ W +L D Y  V  D+ ++   G V+ + N E     L+PRG+ FL EL G V +               +P                    S + +T  D    IRRGEAVR+ G+WFRVSS       +  Q  R  APPSV    DL  +
Sbjct:   51 KSDLEKQADVLLFLRHHRSSGCLPPTV--IYKSLGIDLTEGGRDDSVAKMLLSNPKVNVEEVPDPENPTLSILLFGYRAKFSTVRDKSTLLAQINRCKNGVKWSDLLDAYDGVEGDLQSLLRGGEVLGVLNSEEKDKILFPRGEQFLVELDGVVSVSLPVLPDERAIALITDPVQRQLKRNEVARLKHQRRLASQIVQTDVDPRTQIRRGEAVRIGGEWFRVSSSIRDDLPLDKQPPRAQAPPSVVSMKDLSKK 302          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A7S4RJ73_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RJ73_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.070e-20
Identity = 88/276 (31.88%), Postives = 120/276 (43.48%), Query Frame = 0
Query:   35 AFFKEPEKKTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKG-RDDEVLEMLTANPKV---EAVNEEDP-LQETAFTYMAKYAVSNQHE---LLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRI----------------EPGSA------------------------------VAKTQEDMNHHIRRGEAVRLSGQWFRVSSET-----VGNQTQRTAAPPSVTMNADLKLR 251
            A     E K   E+  D++ +L+    S   P +I  I   T +DL +G  DD+V +ML  NPKV   E  + E+P L    + Y AK+  SN H+   LL  I+RCK G+   +L D Y  V +D+  +   G V+A++N E     L+PRG+ FL EL G V +                 P  A                              +  T  D    IRRGEA+ + GQWFRVSS       +  Q  R  APPSVT   DL  +
Sbjct:   52 ALVAAAEAKNPLEKQFDILAFLQAHRSSKCIPPSI--IYAKTGIDLSEGGADDDVAKMLENNPKVCIEEMPDPENPSLLILTYGYQAKF--SNVHDKIGLLAQINRCKNGVATRDLIDAYDGVLNDLNELVTGGEVLAVQNPEDKDRVLFPRGETFLVELDGHVTVPDHGLDGTTGAGGELHHPNDASVQDPVVLAALQKARMHRQQNHMTLFKNCVIVDTDMDPKKQIRRGEAINVGGQWFRVSSAVKDGVPLSEQPARAQAPPSVTSLKDLSKK 323          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A7S3L736_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L736_9STRA)

HSP 1 Score: 103 bits (256), Expect = 3.130e-20
Identity = 84/255 (32.94%), Postives = 122/255 (47.84%), Query Frame = 0
Query:   27 GALGAGSSAFFKEPEKKTNAERHADVVEYL-KRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEAVNEEDP----LQETAFTYMAKYA-VSNQHELLHLIDRCKGGICWEELQDTY--ATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKV-----------------RIEPGSAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSET-----VGNQTQRTAAPPSVTMNADLKLR 251
            G+ G  +   F + + K + E+  D++ +L K R   G  P+ I +   +T +DL    D +V  ML  NPK+      DP    L+   ++Y A Y  V ++  LL  I+R   G+    L D Y  A VA+D++A+   G VIA++N E     L+PRG+ FL EL G +                 ++ P +   +T  D    IRRGEAV++ GQWFRVSS       +  Q  R  AP SV    DL  R
Sbjct:   35 GSPGLSTEELFLQAQNKPDLEKQFDILNFLQKHREAGGLAPSVIYK---STGIDLEL--DTKVAAMLKNNPKIHVDQWPDPENPALKVPHYSYQATYPNVRDRATLLAQINREFNGVPMRHLLDAYQEAEVAADISALVTAGDVIAVQNSEDKDKILFPRGEPFLVELDGLIAIPRPNETKSEDTDNREKVPPETVYVETDVDPCPQIRRGEAVQVGGQWFRVSSAVKAGLPLSEQPSRAQAPLSVVSLQDLSKR 284          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: K0SH68_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SH68_THAOC)

HSP 1 Score: 103 bits (256), Expect = 3.930e-20
Identity = 85/269 (31.60%), Postives = 124/269 (46.10%), Query Frame = 0
Query:   42 KKTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGR-DDEVLEMLTANPKVEAVNEEDP----LQETAFTYMAKYA-VSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRI---------EPG-------------------------SAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSET-----VGNQTQRTAAPPSVTMNADL-KLRVTDTYAEAMGAPT 264
            +K++ E+ ADV+ +L+    +G  P  +  I     +DL  G  D  V++ML  NPKV      DP    L    F+Y AK++ V ++  LL  I+R K G+ W +L D Y  V  D+ ++   G V+A+   E  ++ ++PRG+ FL EL G V++         EP                          S + +T  D    IRRGEA+++ G+WFRVSS       +  Q  R  APPSV    DL K    D Y     A T
Sbjct:   52 QKSDLEKQADVLVFLRNHRSAGFLPPAV--IYKNLGIDLSDGGVDSAVVKMLECNPKVNVEEVPDPENPSLAMNTFSYRAKFSTVRDKPTLLAQINRMKNGVRWADLSDAYDGVEVDLQSLMTAGEVLAV-GPEPKELVVFPRGESFLVELDGCVKLKEEVPPLPEEPTDKTDQQQMAVYKNRLAEYKNARKLQSCLIQTDIDPRLQIRRGEAIKIGGEWFRVSSAVRDDLPLDKQPPRAQAPPSVVSMKDLSKKNDADGYVRRFDAKT 317          
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Match: A0A7S3PVG4_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PVG4_9STRA)

HSP 1 Score: 100 bits (249), Expect = 2.850e-19
Identity = 79/252 (31.35%), Postives = 117/252 (46.43%), Query Frame = 0
Query:   43 KTNAERHADVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDE-VLEMLTANPKVEAVNEEDP----LQETAFTYMAKYA-VSNQHELLHLIDRCKGGICWEELQDTYATVASDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPG---------------------------------SAVAKTQEDMNHHIRRGEAVRLSGQWFRVSSE----TVGNQTQRTAAPPSVTMNADLKLR 251
            KT+ E+  DV+++L+    SG  P +I  I  +  VDL +G  DE V ++L  N ++      DP    L    F Y AK+  V N+  LL  ++ CK GI   +L D+Y  +  D+  +   G +IA+ N E     L+PRG+ FL EL G +++  G                                 S +A++  D    IRRGEAV + GQWFRVSS     ++  Q  R  AP SV+   +L  +
Sbjct:   50 KTDLEKQYDVIQFLQAHRSSGCLPPSI--IYKSIRVDLSEGGHDESVTKLLLKNARIRIEEIPDPENPSLTIYTFGYQAKFNNVRNRTGLLAQVNSCKNGIRQRDLLDSYEGIQEDIDQLITGGEIIAVLNSEDKDKILFPRGEPFLAELDGHIKVHDGLLEPIIAPTGSNGNSNEMTLDSMRKAQLEKQQYSFIAESDVDPRKQIRRGEAVCIGGQWFRVSSAIREGSLSEQPARAHAPLSVSSRKELSKK 299          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.23.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A6H5JPC1_9PHAE1.440e-20772.97TFIIE beta domain-containing protein n=1 Tax=Ectoc... [more]
D7FZN3_ECTSI1.090e-12675.79TFIIE beta domain-containing protein n=1 Tax=Ectoc... [more]
A0A836C8F9_9STRA2.460e-5939.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W4GDG0_9STRA3.920e-2830.00TFIIE beta domain-containing protein n=8 Tax=Aphan... [more]
A0A2P4XVP3_9STRA4.990e-2629.49TFA2_Winged_2 domain-containing protein (Fragment)... [more]
B8C9R6_THAPS9.520e-2634.25Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S4RJ73_9STRA1.070e-2031.88Hypothetical protein (Fragment) n=2 Tax=Ditylum br... [more]
A0A7S3L736_9STRA3.130e-2032.94Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
K0SH68_THAOC3.930e-2031.60Uncharacterized protein n=2 Tax=Thalassiosira ocea... [more]
A0A7S3PVG4_9STRA2.850e-1931.35Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003166Transcription factor TFIIE beta subunit, DNA-binding domainPFAMPF02186TFIIE_betacoord: 51..120
e-value: 8.6E-8
score: 32.3
IPR003166Transcription factor TFIIE beta subunit, DNA-binding domainPROSITEPS51351TFIIE_BETA_Ccoord: 31..121
score: 9.981277
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR12716:SF8TRANSCRIPTION INITIATION FACTOR IIE SUBUNIT BETAcoord: 41..402
IPR016656Transcription initiation factor TFIIE, beta subunitPANTHERPTHR12716TRANSCRIPTION INITIATION FACTOR IIE, BETA SUBUNITcoord: 41..402

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:219902..226190 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.23.2mRNA_A-nodosum_M_contig113.23.2Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 219501..226208 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.23.2 ID=prot_A-nodosum_M_contig113.23.2|Name=mRNA_A-nodosum_M_contig113.23.2|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=414bp
MKSSHHEQRHLTGGAPSSSTPWLGGSGALGAGSSAFFKEPEKKTNAERHA
DVVEYLKRRTQSGKGPATITEISDATDVDLRKGRDDEVLEMLTANPKVEA
VNEEDPLQETAFTYMAKYAVSNQHELLHLIDRCKGGICWEELQDTYATVA
SDMTAMRETGRVIAIENRETHKMNLYPRGDVFLTELPGKVRIEPGSAVAK
TQEDMNHHIRRGEAVRLSGQWFRVSSETVGNQTQRTAAPPSVTMNADLKL
RVTDTYAEAMGAPTETDEDDRTVTIGRQLPAKDAAEMKHPLPVNGVFEGD
GAFEGRAVRHGCCKALRELWKETRAMVPQDPAELHQVMFQKKLTTSRDVG
TFKRPKRKVDDGSAKRERRRLKRLMKRQKTARAYKAVTNTHLENTLIGRL
LQGDGGGGDRGGL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003166TFIIE_bsu_DNA-bd
IPR016656TFIIE-bsu