prot_A-nodosum_M_contig113.10.3 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig113.10.3
Unique Nameprot_A-nodosum_M_contig113.10.3
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length534
Homology
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: D7FLH1_ECTSI (Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLH1_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 3.720e-108
Identity = 169/224 (75.45%), Postives = 192/224 (85.71%), Query Frame = 0
Query:  163 QPPLDWHQWAPPGVNKQVLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDD-GRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFFMVR 385
            + PLDWHQW P G+N Q+LN+G +V  ++L+        +QYQPRVSG+WNTLKVYFTVDN YV++KLKVLL  ++KKDW+RLPSEDEVKDD GRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG SAAA SD   TFSPEVLTEVTSSCIVTQLL+VLLIRLGLYLLNSPAV+LDLVAYTGY+YVGL INMTVG+  G  WYY+AL WTG MMSFFM +
Sbjct:   51 EQPLDWHQWTPDGMNAQMLNVGGNVASNFLKSNV-----AQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLKKDWFRLPSEDEVKDDQGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKG-SAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLVAYTGYKYVGLCINMTVGVFSGKTWYYLALLWTGSMMSFFMFK 268          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A6H5JNN8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNN8_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 2.040e-107
Identity = 167/221 (75.57%), Postives = 191/221 (86.43%), Query Frame = 0
Query:  165 PLDWHQWAPPGVNKQVLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFFMVR 385
            PLDWHQW P G+N Q+LN+G +V  ++L+        +QYQPRVSG+WNTLKVYFTVDN YV++KLKVLL  +++KDW+RLPSEDEVKDDGRPKFERP+ADVNAPDLYVPLMSFITFVL+TGYAKG SAAA SD   TFSPEVLTEVTSSCIVTQLL+VLLIRLGLYLLNSPAV+LDL+AYTGY+YVGL INMTVG+  G  WYY+AL WTG MMSFFM +
Sbjct:  180 PLDWHQWTPDGMNAQMLNVGGNVASNFLKSNV-----AQYQPRVSGYWNTLKVYFTVDNRYVLKKLKVLLLSVLRKDWFRLPSEDEVKDDGRPKFERPVADVNAPDLYVPLMSFITFVLLTGYAKG-SAAALSDGAGTFSPEVLTEVTSSCIVTQLLEVLLIRLGLYLLNSPAVVLDLIAYTGYKYVGLCINMTVGVFSGRTWYYLALLWTGSMMSFFMFK 394          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A835YSN9_9STRA (Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSN9_9STRA)

HSP 1 Score: 210 bits (535), Expect = 3.340e-61
Identity = 113/209 (54.07%), Postives = 148/209 (70.81%), Query Frame = 0
Query:  180 VLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDE-VKDDGRP--KFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFFMVR 385
            +LNMG ++ K ++         ++YQP VSGFW  LK YF VDN YV+RK KVLL P++KK W+R+P+E+     DG    KF RP  D NAPDLY+PLM+FIT  L++G+ KG ++         F+PEVL EVTSS +V QLL+VLL+RLGLYLL +PA +LDLVA+TGY++V L INM VGI LG   YYVAL +TGLM ++FM++
Sbjct:    1 MLNMGGTMAKSFISSNM-----ARYQPGVSGFWALLKHYFAVDNAYVLRKFKVLLLPVLKKSWHRVPAEEAGAAQDGSAQFKFARPCVDENAPDLYLPLMAFITHALISGFVKGRAS--------NFTPEVLVEVTSSAMVVQLLEVLLVRLGLYLLGAPAAMLDLVAFTGYKFVALCINMAVGIALGRTGYYVALVYTGLMTAYFMLK 196          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: W7TGL4_9STRA (Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGL4_9STRA)

HSP 1 Score: 184 bits (468), Expect = 1.510e-49
Identity = 109/250 (43.60%), Postives = 150/250 (60.00%), Query Frame = 0
Query:  159 GVGGQPPLDWHQWA-PPGVNKQVLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDG----------------------RPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFFMVR 385
            G G QP +D+   A     N Q  +MG  + ++YL         S+Y P V+  W+ LK YF V++ YV RKL  L+FP  K+ W R     ++KD G                      RP+++ P+ D NAPDLY+PLM+F+T+VLVTGYAKG          N+F+PEVL EVTSSC+V QLL++ +IRLGLYLL +PA +LDL+A TGY+YV L  NM +G+ LG R Y  A+ +TGL M++F ++
Sbjct:   87 GQGHQPNMDFGLNAITAAANSQAFSMGVGMGQEYLNASV-----SRYTPWVTSVWHGLKYYFAVNHHYVKRKLFTLVFPYRKRHWRR-----QMKDSGAAGSSGAYGQQGGNADSASAMYRPQYQVPMLDENAPDLYIPLMAFVTYVLVTGYAKGTK--------NSFTPEVLVEVTSSCLVMQLLEIAVIRLGLYLLQAPATLLDLLAVTGYKYVALNFNMVLGLNLGPRVYLAAMVYTGLAMAYFSLK 318          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A024UUY6_9STRA (Protein YIF1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUY6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.510e-39
Identity = 89/202 (44.06%), Postives = 128/202 (63.37%), Query Frame = 0
Query:  181 LNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            +N G  +++D    Q K ++       ++ F  ++K YFTV+N YVV +LK+LL P + KDW R+   +    D    +  P  D NAPDLY+PLMSF+T++L+ GY KGAS          F+P+V+T+V++SC + QLL++ L++LGLYLLNS    LDLV++TGY+YV L +N  V + LG   YY  LA+TGL  SFF
Sbjct:  121 MNHGAKLMED----QVKSFMPGAAAGALNMF-GSVKYYFTVNNTYVVHRLKMLLCPFLHKDWRRIVQSEGNGTDVA--YAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGR--------FNPDVITDVSTSCCLLQLLEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVLNTVVHLVLGYLPYYAVLAYTGLATSFF 307          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A024GGU5_9STRA (Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GGU5_9STRA)

HSP 1 Score: 154 bits (390), Expect = 3.610e-39
Identity = 85/207 (41.06%), Postives = 121/207 (58.45%), Query Frame = 0
Query:  176 VNKQVLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            +   +  +  S   D+LQ Q + Y+   Y     G W  LK YFTVDN YV  +LK+LLFP   K+W R+    +  D  + K+  PI D+NAPDLY+PLM F+T++L+ GY KGAS        N FSP+V+    S C+V QL++V ++   LYLLNS    LDL+A++GY+Y  L I+       G   YY +L +TG+ +S+F
Sbjct:   76 IRNPMAGVAMSTASDFLQKQSQAYIPGAY-----GVWGRLKHYFTVDNNYVKNRLKILLFPFWHKNWRRI---GDTTDPNQNKYAPPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLIEVAILASFLYLLNSSVSFLDLIAFSGYKYTSLVIDTICYQLFGSLAYYGSLIYTGIALSYF 266          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A6A5A968_9STRA (Protein YIF1 n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A968_9STRA)

HSP 1 Score: 153 bits (387), Expect = 4.510e-39
Identity = 90/206 (43.69%), Postives = 131/206 (63.59%), Query Frame = 0
Query:  181 LNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPK----FERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            +N G  +++D    Q K ++       ++ F  ++K YFTV+N YVV +LK+LL P + KDW R+     V+++G       +  P  D NAPDLY+PLMSF+T++L+ GY KGAS          F+P+V+TEV++ C + QL+++ L++LGLYLLNS    LDLV++TGY+YV L IN  V + LG   YYV LA+TG+  SFF
Sbjct:   26 MNHGAKMMED----QVKSFMPGAAAGALNMF-GSVKYYFTVNNTYVVHRLKMLLCPFIHKDWRRI-----VQNEGNAGVDVVYAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGR--------FNPDVITEVSTYCCLMQLVEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVINTVVHLILGYIPYYVVLAYTGIATSFF 213          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: W4F9U6_9STRA (Protein YIF1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4F9U6_9STRA)

HSP 1 Score: 155 bits (391), Expect = 7.900e-39
Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 0
Query:  181 LNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            +N G  +++D    Q K ++       ++ F  ++K YFTV+N YVV +LK+LL P + KDW R+   +         +  P  D NAPDLY+PLMSF+T++L+ GY KGAS          F+P+V+TEV++ C + QL+++ L++LGLYLLNS    LDLV++TGY+YV L IN  V + LG   YYV LA+TG+  SFF
Sbjct:  126 MNHGAKMMED----QVKSFMPGAAAGALNMF-GSVKYYFTVNNTYVVHRLKMLLCPFIHKDWRRIVQNEGNNTGVDVVYAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGR--------FNPDVITEVSTYCCLMQLVEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVINTVVHLILGYIPYYVVLAYTGIATSFF 314          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: F0WGG6_9STRA (Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WGG6_9STRA)

HSP 1 Score: 155 bits (393), Expect = 8.440e-39
Identity = 87/203 (42.86%), Postives = 119/203 (58.62%), Query Frame = 0
Query:  180 VLNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            V  +  S   D++Q Q + Y+   Y     G W  LK YFTVDN YV  +LK+LLFP   K+W RL    +  D    K+  PI D+NAPDLY+PLM F+T++L+ GY KGAS        N FSP+V+    S C+V QLL+V ++   LYLLNS    LDL+A++GY+Y  L I+       G   YY +L +TG+ +S+F
Sbjct:  160 VAGVAMSTASDFIQKQSQAYIPGAY-----GVWERLKHYFTVDNNYVKNRLKILLFPFWHKNWRRL---GDTTDPNYNKYAAPINDINAPDLYIPLMGFLTYILIVGYTKGAS--------NQFSPDVIGADASYCLVMQLLEVAILASFLYLLNSSVSFLDLIAFSGYKYTSLVIDTICYQLFGSLAYYASLIYTGVALSYF 346          
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Match: A0A397AV18_9STRA (Protein YIF1 n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397AV18_9STRA)

HSP 1 Score: 155 bits (391), Expect = 8.450e-39
Identity = 88/202 (43.56%), Postives = 127/202 (62.87%), Query Frame = 0
Query:  181 LNMGESVVKDYLQVQYKDYLKSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDEVKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDGNTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQYVGLGINMTVGICLGLRWYYVALAWTGLMMSFF 382
            +N G  +++D    Q K ++       ++ F  ++K YFTV+N YVV +LK+LL P + KDW R+   +         +  P  D NAPDLY+PLMSF+T++L+ GY KGAS          F+P+V+TEV++ C + QL+++ L++LGLYLLNS    LDLV++TGY+YV L IN  V + LG   YYV LA+TG+  SFF
Sbjct:  141 MNHGAKMMED----QVKSFMPGAAAGALNMF-GSVKYYFTVNNTYVVHRLKMLLCPFIHKDWRRIVQNEGNNTGVDVVYAPPSMDKNAPDLYIPLMSFVTYILIVGYIKGASGR--------FNPDVITEVSTYCCLMQLVEICLMKLGLYLLNSQINWLDLVSFTGYKYVALVINTVVHLILGYIPYYVVLAYTGIATSFF 329          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig113.10.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLH1_ECTSI3.720e-10875.45Protein YIF1 n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5JNN8_9PHAE2.040e-10775.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YSN9_9STRA3.340e-6154.07Protein YIF1 n=1 Tax=Tribonema minus TaxID=303371 ... [more]
W7TGL4_9STRA1.510e-4943.60Protein YIF1 n=2 Tax=Monodopsidaceae TaxID=425072 ... [more]
A0A024UUY6_9STRA3.510e-3944.06Protein YIF1 n=1 Tax=Aphanomyces invadans TaxID=15... [more]
A0A024GGU5_9STRA3.610e-3941.06Protein YIF1 n=1 Tax=Albugo candida TaxID=65357 Re... [more]
A0A6A5A968_9STRA4.510e-3943.69Protein YIF1 n=3 Tax=Aphanomyces astaci TaxID=1120... [more]
W4F9U6_9STRA7.900e-3943.56Protein YIF1 n=2 Tax=Aphanomyces astaci TaxID=1120... [more]
F0WGG6_9STRA8.440e-3942.86Protein YIF1 n=1 Tax=Albugo laibachii Nc14 TaxID=8... [more]
A0A397AV18_9STRA8.450e-3943.56Protein YIF1 n=2 Tax=Aphanomyces astaci TaxID=1120... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005578Yif1 familyPFAMPF03878YIF1coord: 180..386
e-value: 3.3E-47
score: 161.0
IPR005578Yif1 familyPANTHERPTHR14083YIP1 INTERACTING FACTOR HOMOLOG YIF1 PROTEINcoord: 76..416
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 42..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig113contigA-nodosum_M_contig113:38824..42168 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig113.10.3mRNA_A-nodosum_M_contig113.10.3Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig113 38793..43498 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig113.10.3 ID=prot_A-nodosum_M_contig113.10.3|Name=mRNA_A-nodosum_M_contig113.10.3|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=534bp
MSLPRPGGHFGEKKASSIYSGGPSSTSNAFAAYNAPSATPQHHYNPVASN
TPGQAGFSYSGASGSGGGGDGFGTAGAGVPQGFARETPPVGGTPAGGALG
RGAGDQWDQYGFSNVGIGGGSGRGSGGMDAFSGSVGSAPGGAMGIGGRAG
ANQQGAGAGVGGQPPLDWHQWAPPGVNKQVLNMGESVVKDYLQVQYKDYL
KSQYQPRVSGFWNTLKVYFTVDNGYVVRKLKVLLFPLMKKDWYRLPSEDE
VKDDGRPKFERPIADVNAPDLYVPLMSFITFVLVTGYAKGASAAAFSDDG
NTFSPEVLTEVTSSCIVTQLLQVLLIRLGLYLLNSPAVILDLVAYTGYQY
VGLGINMTVGICLGLRWYYVALAWTGLMMSFFMVRESQRYPFVTVFAITE
SHNNSWHLVCIFIRASISPISFGHALVQQQQESLVEELRTLLSFAGVCWA
VALGSCRIAARVLRSLFRGLKWHSREVCAHSATKAQLGGMRSDGFGLLGN
WRTTASWSVRQSRSQPPRRIVTFPRRQKLDAGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005578Yif1_fam