prot_A-nodosum_M_contig1129.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1129.4.1
Unique Nameprot_A-nodosum_M_contig1129.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length108
Homology
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A1R3JQF5_COCAP (Uncharacterized protein n=1 Tax=Corchorus capsularis TaxID=210143 RepID=A0A1R3JQF5_COCAP)

HSP 1 Score: 103 bits (258), Expect = 9.130e-24
Identity = 53/108 (49.07%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EPTT  EA   PE  +W  A+K EMD   A  VW +VD P+    +G K +FK+K   DG V +YK RFVAKGFRQI G+ Y E+ SP     SIR+ LA+ A  D+E
Sbjct:  397 EPTTYQEAVAGPESEKWLEAMKSEMDSMYANQVWTLVDPPKGIKPIGCKWLFKKKTDMDGNVHTYKGRFVAKGFRQIHGVDYDETFSPVAMLKSIRILLAIAAFYDYE 504          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A2K3MK28_TRIPR (Putative retrotransposon Ty1-copia subclass protein n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MK28_TRIPR)

HSP 1 Score: 98.6 bits (244), Expect = 1.660e-23
Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP T  EA   PE  +W  A+K EMD      VW +V+ P+  N +G K VFK+K   DG V +YK R VAKGF+QI G+ Y E+ SP     SI++ LA+ A  D+E
Sbjct:   53 EPVTYQEAVTGPESAKWLEAMKSEMDSMYTNQVWNLVEAPEGINPIGCKWVFKKKTDMDGNVSTYKARLVAKGFKQIHGVDYDETFSPVAMVKSIQILLAIAAYHDYE 160          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A396GW39_MEDTR (Putative RNA-directed DNA polymerase n=2 Tax=Medicago truncatula TaxID=3880 RepID=A0A396GW39_MEDTR)

HSP 1 Score: 103 bits (257), Expect = 1.670e-23
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP T  EA   PE+ +W  A+K EMD      VW ++D P+  N +G K VFK+K+  DG+V +YK R VAKGF+QI G+ Y E+ SP     SIR+ LA+ A  D+E
Sbjct:  766 EPVTYTEAITGPEYEKWLEAMKSEMDSMYTNQVWNLIDAPEGINPIGCKWVFKKKIDMDGKVSTYKARLVAKGFKQIHGVDYDETFSPVAMIKSIRILLAIAAYHDYE 873          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A8J5YBS1_9ROSI (Uncharacterized protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J5YBS1_9ROSI)

HSP 1 Score: 102 bits (253), Expect = 5.670e-23
Identity = 52/108 (48.15%), Postives = 68/108 (62.96%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP T  EA  SPE  +W  AL+ EMD      VW +VD P+    +G K VFK+K+  DG V++YK R VAKGFRQI G++Y E+ SP     SIR++LA+ A  D+E
Sbjct:  445 EPRTYQEAVASPESEKWLEALRSEMDSMYENQVWTLVDPPKGVKPIGCKWVFKKKIDMDGNVQTYKGRLVAKGFRQIHGVNYDETFSPVAMFKSIRISLAIAAFHDYE 552          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: UPI001C988E4D (hypothetical protein n=3 Tax=Bacteria TaxID=2 RepID=UPI001C988E4D)

HSP 1 Score: 99.8 bits (247), Expect = 7.670e-23
Identity = 47/108 (43.52%), Postives = 70/108 (64.81%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            +PTT   A +  +  +W+ A+K EMD   + GVW +VD P+    +G K ++KRK+G DG+VE+YK R VAKG+ Q +G+ Y+E+ SP     SIR+ LA+ A  D+E
Sbjct:   88 DPTTYEGAMLDIDSSRWQEAMKSEMDSMYSNGVWTLVDPPEGIVPIGCKWIYKRKIGSDGKVETYKARLVAKGYNQKQGVDYEETFSPVAMLKSIRILLAIAAYYDYE 195          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: UPI0011327E8C (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI0011327E8C)

HSP 1 Score: 95.9 bits (237), Expect = 1.470e-22
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            +P T  EA    +  +W  A+K E+D      VW +VD P+    +G K VFK+K+G DG+VE+YK R VAKGFRQ +GI Y+E+ SP     SIR+ LA+ A  D+E
Sbjct:   54 DPLTYEEAISDIDSSKWIDAMKSEIDSMYKNQVWDLVDPPEGIVPIGNKWVFKKKIGSDGKVETYKARLVAKGFRQRQGIDYEETFSPVAMLKSIRILLAIAAYYDYE 161          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A2K3KEZ8_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3KEZ8_TRIPR)

HSP 1 Score: 97.4 bits (241), Expect = 2.350e-22
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP T  EA + PE  +W  A+K E D      VW +V+ P+  N +G K VFK+K   DG+V +YK R VAKGF+QI GI+Y E+ SP     SIR+ L + A  D+E
Sbjct:  110 EPVTYQEAIIGPESEKWLEAMKSETDSVYINQVWTLVEPPEGINPIGCKWVFKKKTDMDGKVHTYKARLVAKGFKQIHGINYDETFSPVAMIKSIRILLVIAAYHDYE 217          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A2K3MK96_TRIPR (Putative retrotransposon Ty1-copia subclass protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MK96_TRIPR)

HSP 1 Score: 97.4 bits (241), Expect = 2.430e-22
Identity = 49/108 (45.37%), Postives = 65/108 (60.19%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP T  EA + PE  +W  A+K E D      VW +V+ P+  N +G K VFK+K   DG+V +YK R VAKGF+QI GI+Y E+ SP     SIR+ L + A  D+E
Sbjct:  118 EPVTYQEAIIGPESEKWLEAMKSETDSVYINQVWTLVEPPEGINPIGCKWVFKKKTDMDGKVHTYKARLVAKGFKQIHGINYDETFSPVAMIKSIRILLVIAAYHDYE 225          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: A0A6A4RA94_9RHOB (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Pelagicola marinus TaxID=2578117 RepID=A0A6A4RA94_9RHOB)

HSP 1 Score: 94.4 bits (233), Expect = 5.200e-22
Identity = 47/108 (43.52%), Postives = 63/108 (58.33%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            EP+T  +A   P+  +W  A++ EMD      VW ++D P     +G+K +FK K  +DG V  YK R VAKGFRQI GI Y E+ SP     SIR+ LA+ A  D+E
Sbjct:   76 EPSTYKQAVTGPDSKKWLEAMRSEMDSMFENQVWDLIDLPNGVKPIGSKWIFKLKTDKDGNVSVYKARLVAKGFRQIHGIDYDETFSPVVMVRSIRIILAIAAYYDYE 183          
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Match: UPI0015A81C6A (uncharacterized mitochondrial protein AtMg00820-like n=1 Tax=Stegodyphus dumicola TaxID=202533 RepID=UPI0015A81C6A)

HSP 1 Score: 93.2 bits (230), Expect = 6.010e-22
Identity = 45/108 (41.67%), Postives = 66/108 (61.11%), Query Frame = 0
Query:    1 EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKTVFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALAVMALLDWE 108
            +P TL EA  SP+  +W+ A++ E++       W +V RP+   V+  K VFKRK+ +DG+VE YK R VA+G+ Q++GI Y+E+ SP     SIR  LA     DW+
Sbjct:   30 DPETLEEALTSPDAEKWKLAMEEELENLKRNETWDIVPRPEGRKVVKCKWVFKRKLNKDGQVERYKARLVARGYTQVEGIDYKETFSPVIKTKSIRTLLAFSVEQDWQ 137          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1129.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1R3JQF5_COCAP9.130e-2449.07Uncharacterized protein n=1 Tax=Corchorus capsular... [more]
A0A2K3MK28_TRIPR1.660e-2345.37Putative retrotransposon Ty1-copia subclass protei... [more]
A0A396GW39_MEDTR1.670e-2346.30Putative RNA-directed DNA polymerase n=2 Tax=Medic... [more]
A0A8J5YBS1_9ROSI5.670e-2348.15Uncharacterized protein n=1 Tax=Gossypium anomalum... [more]
UPI001C988E4D7.670e-2343.52hypothetical protein n=3 Tax=Bacteria TaxID=2 RepI... [more]
UPI0011327E8C1.470e-2245.37hypothetical protein n=1 Tax=Escherichia coli TaxI... [more]
A0A2K3KEZ8_TRIPR2.350e-2245.37Putative retrotransposon Ty1-copia subclass protei... [more]
A0A2K3MK96_TRIPR2.430e-2245.37Putative retrotransposon Ty1-copia subclass protei... [more]
A0A6A4RA94_9RHOB5.200e-2243.52Reverse transcriptase Ty1/copia-type domain-contai... [more]
UPI0015A81C6A6.010e-2241.67uncharacterized mitochondrial protein AtMg00820-li... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 33..107
e-value: 4.5E-15
score: 55.9
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1129contigA-nodosum_M_contig1129:185963..186286 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1129.4.1mRNA_A-nodosum_M_contig1129.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1129 185963..186286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1129.4.1 ID=prot_A-nodosum_M_contig1129.4.1|Name=mRNA_A-nodosum_M_contig1129.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=108bp
EPTTLHEAKVSPEWPQWRGALKHEMDGEIARGVWKVVDRPQKSNVLGTKT
VFKRKVGRDGRVESYKCRFVAKGFRQIKGIHYQESSSPTPTQSSIRMALA
VMALLDWE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2