prot_A-nodosum_M_contig1127.4.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1127.4.1
Unique Nameprot_A-nodosum_M_contig1127.4.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length175
Homology
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BLAST of mRNA_A-nodosum_M_contig1127.4.1 vs. uniprot
Match: A0A6H5L6N4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6N4_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 9.110e-14
Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 0 
Query:    1 MLSFNELHVDFVRLLSATERLAVAGDASADGKWKKXXXXXXXXXXXXXLQSQLQVRLSETNASTYSSQQGFANSRPSAEDLDQYGRRLENLRRKREDLS 99
            M S +E+HVD VRLLSATERL  AG+ SADG W+               QSQLQ +++E +    +   G + + P+AEDL  Y RRLE LRRKR+DL+
Sbjct:    1 MQSAHEIHVDLVRLLSATERLVAAGEPSADGSWEHWPRFCQFITWLDSTQSQLQAKVAEVSRGAGA---GLSPASPAAEDLADYDRRLEILRRKRDDLA 96
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BLAST of mRNA_A-nodosum_M_contig1127.4.1 vs. uniprot
Match: D7FHQ2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHQ2_ECTSI)

HSP 1 Score: 71.6 bits (174), Expect = 2.290e-11
Identity = 44/96 (45.83%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    1 MLSFNELHVDFVRLLSATERLAVAGDASADGKWKKXXXXXXXXXXXXXLQSQLQVRLSETNASTYSSQQGFANSRPSAEDLDQYGRRLENLRRKRE 96
            M S +E+HV+ VRLLSATERL  AG+ SA G W+               QSQLQ R++E +    +   G + + P+AEDL  Y RRLE LRRKR+
Sbjct:    1 MPSVHEIHVELVRLLSATERLVAAGEPSASGSWENWPRFCQFITSLDSTQSQLQARVAEVSRGAGA---GLSPALPTAEDLADYDRRLEILRRKRD 93
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1127.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L6N4_9PHAE9.110e-1447.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FHQ2_ECTSI2.290e-1145.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 81..108
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 66..88
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 118..175

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1127contigA-nodosum_M_contig1127:8225..12811 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1127.4.1mRNA_A-nodosum_M_contig1127.4.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1127 8225..12811 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1127.4.1 ID=prot_A-nodosum_M_contig1127.4.1|Name=mRNA_A-nodosum_M_contig1127.4.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=175bp
MLSFNELHVDFVRLLSATERLAVAGDASADGKWKKWSRFCQFISSLESLQ
SQLQVRLSETNASTYSSQQGFANSRPSAEDLDQYGRRLENLRRKREDLSS
AAAAAAAEAAAAAASSEAAAAAATVSDPSAGAVSTTPEAGVVPVVTAAGR
GKNAPEEKFNQRGGGGSVVHRGRSR
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