prot_A-nodosum_M_contig1125.7.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1125.7.1
Unique Nameprot_A-nodosum_M_contig1125.7.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length103
Homology
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5K1X0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1X0_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 6.500e-11
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQQ 44
            M D+L SP VLAFPD+E AI+G RKFRLITDAS  G GAVIEQ+
Sbjct:  139 MKDKLSSPEVLAFPDYEGAITGKRKFRLITDASISGLGAVIEQE 182          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KRW3_9PHAE (Reverse transcriptase domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRW3_9PHAE)

HSP 1 Score: 66.6 bits (161), Expect = 1.240e-10
Identity = 32/44 (72.73%), Postives = 36/44 (81.82%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQQ 44
            M D+L SP VLAFPD+E AI+G RKFRLITDAS  G GAVIEQ+
Sbjct:  256 MKDKLSSPEVLAFPDYEGAITGKRKFRLITDASISGLGAVIEQE 299          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5L269_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L269_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.530e-8
Identity = 29/43 (67.44%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            +L +L S  VLAFPD++AAI G+RKFRL TDAS  GFGAV+EQ
Sbjct:  351 VLAQLASYEVLAFPDYDAAIDGTRKFRLTTDASISGFGAVLEQ 393          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5K8H1_9PHAE (RT_RNaseH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8H1_9PHAE)

HSP 1 Score: 58.9 bits (141), Expect = 6.060e-8
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            +L +L S  VLAFPD+ AAI G+RKFRL TDAS  GFGAV+EQ
Sbjct:  323 VLAQLASYEVLAFPDYAAAIDGTRKFRLTTDASISGFGAVLEQ 365          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KZ45_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ45_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 8.600e-8
Identity = 29/43 (67.44%), Postives = 34/43 (79.07%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            +L +L S  VLAFPD+ AAI G+RKFRL TDAS  GFGAV+EQ
Sbjct:  378 VLAQLASFEVLAFPDYAAAIDGARKFRLTTDASISGFGAVLEQ 420          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KCS5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCS5_9PHAE)

HSP 1 Score: 57.0 bits (136), Expect = 1.640e-7
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            ++D+L SPNVLA+ D   AISG RKFR+ITDAS DG GAVIEQ
Sbjct:  153 LMDKLSSPNVLAYRD---AISGVRKFRVITDASQDGLGAVIEQ 192          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KJH5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJH5_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 7.760e-7
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            +L +L S  VLAFPD+ AAI G+RKFRL TDAS  G GAV+EQ
Sbjct:  202 VLAQLTSYEVLAFPDYAAAIDGTRKFRLTTDASISGSGAVLEQ 244          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5K3K5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3K5_9PHAE)

HSP 1 Score: 55.8 bits (133), Expect = 7.860e-7
Identity = 28/43 (65.12%), Postives = 32/43 (74.42%), Query Frame = 0
Query:    1 MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQ 43
            +L +L S  VLAFPD  AAI G+RKFRL TDAS  GFGA +EQ
Sbjct:  610 VLAQLASYEVLAFPDHAAAIDGTRKFRLTTDASISGFGATLEQ 652          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KMX6_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMX6_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 8.500e-7
Identity = 26/40 (65.00%), Postives = 31/40 (77.50%), Query Frame = 0
Query:    7 SPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQQFN 46
            S   LAFPD+EAAI+GSR F+L +DAS  GFGAV+EQ  N
Sbjct:    2 STTTLAFPDYEAAINGSRPFQLSSDASVHGFGAVLEQHQN 41          
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Match: A0A6H5KNJ9_9PHAE (RT_RNaseH_2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNJ9_9PHAE)

HSP 1 Score: 55.1 bits (131), Expect = 1.240e-6
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0
Query:    7 SPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQQ 44
            S   LAFPD+EAAI GSR F+L +DAS  GFGAV+EQQ
Sbjct:    2 STTTLAFPDYEAAIDGSRPFQLSSDASVHGFGAVLEQQ 39          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1125.7.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A6H5K1X0_9PHAE6.500e-1172.73Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KRW3_9PHAE1.240e-1072.73Reverse transcriptase domain-containing protein n=... [more]
A0A6H5L269_9PHAE2.530e-867.44Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8H1_9PHAE6.060e-867.44RT_RNaseH domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZ45_9PHAE8.600e-867.44Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KCS5_9PHAE1.640e-769.77Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJH5_9PHAE7.760e-765.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3K5_9PHAE7.860e-765.12Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KMX6_9PHAE8.500e-765.00RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KNJ9_9PHAE1.240e-668.42RT_RNaseH_2 domain-containing protein n=1 Tax=Ecto... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1125contigA-nodosum_M_contig1125:197205..197513 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1125.7.1mRNA_A-nodosum_M_contig1125.7.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1125 197205..197513 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1125.7.1 ID=prot_A-nodosum_M_contig1125.7.1|Name=mRNA_A-nodosum_M_contig1125.7.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=103bp
MLDELFSPNVLAFPDFEAAISGSRKFRLITDASADGFGAVIEQQFNLYAT
SEESSSTLSVSGAFLSWNATRSCELSSVTDKCSTASRLKSRQITSRFKIS
QC*
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