prot_A-nodosum_M_contig112.54.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig112.54.1
Unique Nameprot_A-nodosum_M_contig112.54.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length358
Homology
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Match: D8LCL4_ECTSI (ATP-dependent DNA helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCL4_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 2.840e-50
Identity = 96/164 (58.54%), Postives = 118/164 (71.95%), Query Frame = 0
Query:  138 GEAEMLSALAPLLEEIVARQRREWDVQAKATEDSEKPPVLDPSRPGKRKLGPAAAKARDDAIVAVMQKMERPIKRAVDVVEVDSSVPMHLQKINPFSGD-DGFSCSSCHTELFNAYMHCYGCEVLLGKDLNLCLGCHASGRLAFPPLGEDELGLTDRLHCPSIP 300
            G+  +L ALAP+LEE+  RQ R++++QAKA E  E    LDPSRPGKRKLGPAAAKARD   V +M KM +P+K AV  VEVD+S+P  L+KINPFS D + F+C+SC  E+FNAY+HCYGCE LL +DL LCL CHA+GR  F        G TD+ HCP IP
Sbjct: 1135 GDLGVLMALAPMLEELTDRQLRDYELQAKAAEKREAAVTLDPSRPGKRKLGPAAAKARDAQTVQLMAKMVKPLKDAVGKVEVDTSIPTFLEKINPFSSDGESFNCASCKAEIFNAYLHCYGCETLLSRDLTLCLACHAAGRFGFSTGAGG--GCTDQDHCPGIP 1296          
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Match: A0A6H5K2H3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2H3_9PHAE)

HSP 1 Score: 173 bits (438), Expect = 2.090e-44
Identity = 99/222 (44.59%), Postives = 123/222 (55.41%), Query Frame = 0
Query:  138 GEAEMLSALAPLLEEIVARQRREWDVQAKATEDSEKPPVLDPSRPGKRKLGPAAAKARDDAIVAVMQKMERPIKRAVDVVEVDSSVPMHLQKINPFSGD-DGFSCSSCHTELFNAYMHCYGCEVLLGKDLNLCLGCHASGRLAFPPLGEDELGLTDRLHCPSIPEATLLQRELKAVGHRNSGQWPASRCGCHQQSCRQCHLCVLCACDCHHRFQLRFRFEHP 358
            G+  +L ALAP+LEE+  RQ R++ +QAKA E  E    L+PSRPGKRKLGPAAAKARD   + +M KM +P+K A   VEVD+S+P  L+KINPFS D + F+C+SC+                                                       E TL QRE  +   R+ G +PAS C C + SCRQCHLCV CACDCH RFQLR+RFEHP
Sbjct:  321 GDLGVLMALAPMLEELTDRQLRDYGLQAKAAEKREAAVTLNPSRPGKRKLGPAAAKARDAQTMQLMAKMVKPLKDAAGRVEVDTSIPTFLEKINPFSSDGESFNCASCN-------------------------------------------------------ERTLEQRERMSRSQRSHGVFPASMCDCKEPSCRQCHLCVACACDCHERFQLRYRFEHP 487          
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Match: A0A7S2RX24_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RX24_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 1.160e-16
Identity = 70/201 (34.83%), Postives = 88/201 (43.78%), Query Frame = 0
Query:  182 PGKRKLGPAAAKARD----DAIVAVMQKMERPIKRAVDVVEVDSSVPMHLQKINPFSGDDGFSCSSCHTELFNAYMHCYGCEVLLGKDLNLCLGCHASGRLAF--------PPLGEDELGL--------TDRLHC-----PSIPEATLLQRELKA-VGHRNSGQWPASRCGCHQQSCRQCHLCVLCACDCHHRFQLRFRFE 356
            PG+ K       A D    D +   MQK ++   RA+   EVD+ V   +  ++P S + GF CS C  EL N Y+HC GCE+LLG+D NLC  CHA   LA         PPL E    L        T R HC     P  P   ++     + V + N    P          C  C LC  C C CH  F+ R RFE
Sbjct:  448 PGEAKTEDGEESAEDPRAKDVVARRMQKRQK--TRALQQ-EVDAWVSPDMSMVDPHSFE-GFQCSHCGKELANQYLHCQGCELLLGEDFNLCFPCHAVSVLALNNGDHSAPPPLPEFGQSLQARGKRKGTQRSHCLPRCLPGQPRPEMISGRCSSEVAYFNETGLPPLYS---HAECALCGLCDFCTCVCHLNFEPRCRFE 641          
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Match: A0A7S1ZIK7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIK7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 1.060e-10
Identity = 41/128 (32.03%), Postives = 54/128 (42.19%), Query Frame = 0
Query:  230 INPFSGDDGFSCSSCHTELFNAYMHCYGCEVLLGKDLNLCLGCHASGRLAFPPLGEDELGLTDRLHCPSIPEATLLQRELKAVGHRNSGQWP-ASRCGCHQ-QSCRQCHLCVLCACDCHHRFQLRFRF 355
            ++P+   D F C  C  EL N YMHC GCE +L KD N+C+GCH+ GR                     +    L  +    + H    +     RC C    +C  C  C  C+C CH  F L  RF
Sbjct: 1040 LDPYGNGD-FFCKLCSEELSNVYMHCDGCEKILNKDFNICIGCHSEGRYKV-----------------KVQMHPLNSKRHSTINHTGDFERMFRKRCPCKNGPACLNCSFCPGCSCKCHRWFTLHCRF 1149          
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Match: F0W0K4_9STRA (Uncharacterized protein AlNc14C4G646 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W0K4_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.140e-9
Identity = 50/163 (30.67%), Postives = 64/163 (39.26%), Query Frame = 0
Query:  207 ERPIKRAVDVVEVDSSVPMHLQKINPFSGDDGFSCSSCHTELFNAYMHCYGCEVLLGKD---------LNLCLGCHASGRLAFPPLGEDE-LGLTDRLHCPSIPEATLLQRELKAVGHRNSGQWPASRCGCHQ-QSCRQCHLCVLCACDCHHRFQLRFRFEHP 358
            E P+K A D+ E                    F+C+ C+ EL N Y  C GC     KD           LC  CH    L +P   + + L     L  P +  A+LL   ++             RC C     C  C LCVLC C CH RFQ+R+RF  P
Sbjct:  237 EIPLKAAADITEDSEDA-------------SNFTCNLCNRELVNGYQLCLGCLACSQKDNSSQIQSKLTRLCYQCH----LKYPKEHQRKRLKQLRSLQLPFVSSASLLNPSIRLHS--------PLRCDCKTTMRCSFCTLCVLCDCQCHTRFQIRYRFATP 374          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig112.54.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LCL4_ECTSI2.840e-5058.54ATP-dependent DNA helicase n=1 Tax=Ectocarpus sili... [more]
A0A6H5K2H3_9PHAE2.090e-4444.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2RX24_9STRA1.160e-1634.83Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S1ZIK7_9STRA1.060e-1032.03Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
F0W0K4_9STRA4.140e-930.67Uncharacterized protein AlNc14C4G646 n=1 Tax=Albug... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..180

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig112contigA-nodosum_M_contig112:655877..661144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig112.54.1mRNA_A-nodosum_M_contig112.54.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig112 655877..662961 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig112.54.1 ID=prot_A-nodosum_M_contig112.54.1|Name=mRNA_A-nodosum_M_contig112.54.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=358bp
MPHSPQNCGVFDDDDSGKAEAKPILGCTSLRSSALGVAIAAAREVLETGA
PAAREAEARAKASEAQAEATVPVMLTNAAKVCGGVSPASGSCSAHSASAS
ASAACSAAGRSAMAAASMASEAVAAAVNATAAAPGVMGEAEMLSALAPLL
EEIVARQRREWDVQAKATEDSEKPPVLDPSRPGKRKLGPAAAKARDDAIV
AVMQKMERPIKRAVDVVEVDSSVPMHLQKINPFSGDDGFSCSSCHTELFN
AYMHCYGCEVLLGKDLNLCLGCHASGRLAFPPLGEDELGLTDRLHCPSIP
EATLLQRELKAVGHRNSGQWPASRCGCHQQSCRQCHLCVLCACDCHHRFQ
LRFRFEHP
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