prot_A-nodosum_M_contig112.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig112.10.1
Unique Nameprot_A-nodosum_M_contig112.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length213
Homology
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A6H5KYE3_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYE3_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 1.580e-45
Identity = 82/145 (56.55%), Postives = 109/145 (75.17%), Query Frame = 0
Query:   45 RNGRTHLTSQLIVTVNAPRPALPPGKRMIRRRKAPPSPAPVSDVEIRNAPVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKK 189
            R  RT +     V ++ PR  LP GKR++RR+K  PS      V+  NAPV +I+S++EY  IL+ N  SLVVIKFFA WCRSCK++D+KYRR+A+E+++VKF E+DV +SP+LKK + V+AVPTVKLHAG LG+VASF CGP+K
Sbjct:   31 RRQRTTIAQIATVAIDTPR-TLPKGKRIVRRKKRQPSQP--KHVDTANAPVTLIKSKAEYDEILRHNINSLVVIKFFAPWCRSCKALDVKYRRMAVENDDVKFVEIDVHQSPDLKKVLGVRAVPTVKLHAGPLGQVASFTCGPRK 172          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A835Z936_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z936_9STRA)

HSP 1 Score: 114 bits (286), Expect = 2.100e-28
Identity = 56/103 (54.37%), Postives = 74/103 (71.84%), Query Frame = 0
Query:   88 VEIRNAPVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKV 190
            V++  APV  + +  EY A+L EN +SLVV K+FA WCRSCK+MDLK++RLALE+  V F E+D+  S ELK+   VKA+P + +HAG LG V +F CGP KV
Sbjct:   12 VDLSTAPVTRVTTSQEYHALLAENPESLVVFKWFAPWCRSCKAMDLKFKRLALENPCVVFAEIDIDVSRELKRQHGVKAIPAIHMHAGHLGLVENFTCGPSKV 114          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A836CK13_9STRA (Thioredoxin domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK13_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 7.880e-21
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0
Query:   90 IRNAPVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKVTVYGTVVVR 199
            +  APV+ + S  EY  +L  N   LVV K+ A +CR+CK+MDLK+RRLALE  +V F +++V  + +LK+A  V  +P + +HAG LG+V +F CGP    +    V R
Sbjct:   74 LSTAPVQHVASSQEYHQLLALNPDKLVVFKWHAPYCRACKAMDLKFRRLALERRDVVFADINVARAVDLKRAHGVAVIPAIHMHAGHLGQVEAFACGPSSAPLLRARVDR 183          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A7S1TN71_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TN71_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 1.030e-18
Identity = 53/151 (35.10%), Postives = 80/151 (52.98%), Query Frame = 0
Query:   39 ASSHHSRNGRTHLTSQLIVTVNAPRPALPPGKRMIRRRKAPPSPAPVSDVEIRNAPVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKK 189
            AS    R  +THL +Q     +    + P   R +       +P P+ +   R  PV  +    +Y+A L+ + + LVVIKF+A WCRSCK+M+ K +RLA E+  + F EVD  E+ EL + + VK++P    + GS G V  F  GP +
Sbjct:   32 ASEGRGRTAKTHLRNQRARVCSEMSVSAPDQVRDVT------APVPILERVTRMEPVVRLSGFGDYLAALECSSERLVVIKFYAPWCRSCKAMEPKVKRLAREYPEILFCEVDFQENHELCRRIGVKSIPAFHFYDGSAGRVEDFTAGPAR 176          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A2V3IJC0_9FLOR (Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IJC0_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 1.430e-17
Identity = 38/99 (38.38%), Postives = 63/99 (63.64%), Query Frame = 0
Query:   94 PVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKVTV 192
            PV++I    +Y+ +L+E+  SLVV+K FA WCRSC+++  K  R A E  NV+F+++D  ++ EL   + V ++PT   + G  GE+  F CGP++  +
Sbjct:   62 PVQLIHGVEQYLQVLRESSDSLVVLKVFAPWCRSCRALTPKVNRFAREFSNVRFFKMDYEQNKELCHRLGVASMPTFVFYWGVAGEIEKFSCGPQRAYI 160          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A7S3YAB7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YAB7_HETAK)

HSP 1 Score: 80.5 bits (197), Expect = 8.140e-15
Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 0
Query:   34 QSTSRASSHHSR-NGRTHLTSQLIVTVNAPRPALPPGKRMIRRRKAPPSPAPVSDVEIRNAPVEV--IRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEH---ENVKFYEVDVLE--SPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKK 189
            Q   R + +HS    + +L S + +   +  P      R    RK P S A      + NA   V  +    EY+ +L +++  LVV+KF+A WCRSCK++D+K+R+ A       +V+F+E DV +  +  +KK + +  +P V ++ GS G+V  F CGP K
Sbjct:   31 QDPGRRTPYHSHLANKRNLASSIFLRKQSGAPT-----RTSNGRKRPLSAASSPSENMSNAEDRVGEVWGMQEYLDVLTQSKNQLVVMKFYAPWCRSCKALDVKFRKWARGEYAARDVRFFECDVFDPQNAAIKKMLEIDNIPLVHMYQGSQGKVEDFKCGPSK 189          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A7S2UVR9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVR9_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 2.420e-14
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0
Query:  103 EYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAM----AVKAVPTVKLHAGSLGEVASFPCGPKKVTVYGTVV-----VRAPCSPLSSH 208
            EY+  +    + LVV+KFFATWCRSCK +D +Y++L  +H +V F E+ +L+     KA      V+ +PTV    G+ G +   PCG K++ ++   +     + AP + +  H
Sbjct:   82 EYLDAIANAGEKLVVVKFFATWCRSCKQLDYQYKKLPAQHPDVMFCEIAMLDEENNNKAFFKQYEVEVLPTVFFFRGAAGMIDRMPCGMKRIPIFKEKIDTYKKMDAPVAAIGHH 196          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A7S3VCG8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VCG8_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 7.010e-14
Identity = 37/116 (31.90%), Postives = 75/116 (64.66%), Query Frame = 0
Query:   81 SPAPVSDVEIRNAPVEVIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVK----FYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKVTV 192
            +P P  +++++N  +  + S+ E+ A+L++N+  ++++KF+A WCR+CK ++ K+ +++ + +  K    F ++ V  + E  KA+ V A+P+V ++ G  G + SFPCGP KV +
Sbjct:  103 NPPPPLELKMKNG-IYDLESKEEHQALLEQNQDKIILLKFYAPWCRACKGLEPKFIQISKDKKYAKLPLVFAQLSVANAKEYVKALGVLALPSVHIYGGEEGLLESFPCGPSKVPI 217          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: A0A7S3ATR9_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3ATR9_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 7.720e-14
Identity = 36/90 (40.00%), Postives = 62/90 (68.89%), Query Frame = 0
Query:  104 YIAILKE--NEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKVT 191
            Y A+++E   E  +VVIKFFA+WCR+CK+M  K+ R+A +  +V+F+E+    + +L K++ +K +P +++  GS G+V  F CGP K++
Sbjct:   64 YEALIEEATRENRVVVIKFFASWCRACKAMSPKFTRIADDWPDVEFHEIMFDNNKKLCKSLGIKILPYIEIIGGSGGKVEGFTCGPSKIS 153          
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Match: B8BY19_THAPS (Thioredoxin domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY19_THAPS)

HSP 1 Score: 74.3 bits (181), Expect = 1.290e-13
Identity = 31/95 (32.63%), Postives = 61/95 (64.21%), Query Frame = 0
Query:   97 VIRSESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEH--ENVKFYEVDVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKK 189
            +I++  +Y+  L++N  SL+ IK++A+WC+SC    + YR+LA +   +N++F EV+  ++ +L K + VK +PTV ++    G+++   C P +
Sbjct:   17 IIQNHEDYVRFLEDNGDSLLCIKYYASWCKSCAKFGIHYRKLARDEADQNIRFAEVEYTQNTKLCKTLKVKKLPTVHMYRKGKGKISDMTCRPSQ 111          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig112.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KYE3_9PHAE1.580e-4556.55Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
A0A835Z936_9STRA2.100e-2854.37Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A836CK13_9STRA7.880e-2142.73Thioredoxin domain-containing protein n=1 Tax=Trib... [more]
A0A7S1TN71_9RHOD1.030e-1835.10Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
A0A2V3IJC0_9FLOR1.430e-1738.38Thioredoxin-like 2-1, chloroplastic n=1 Tax=Gracil... [more]
A0A7S3YAB7_HETAK8.140e-1532.32Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2UVR9_9STRA2.420e-1433.91Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3VCG8_9STRA7.010e-1431.90Hypothetical protein (Fragment) n=1 Tax=Chaetocero... [more]
A0A7S3ATR9_9EUKA7.720e-1440.00Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
B8BY19_THAPS1.290e-1332.63Thioredoxin domain-containing protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 85..190
e-value: 9.0E-19
score: 69.4
NoneNo IPR availablePIRSRPIRSR037293-1PIRSR037293-1coord: 114..176
e-value: 2.7E-6
score: 23.6
NoneNo IPR availablePIRSRPIRSR000077-4PIRSR000077-4coord: 111..173
e-value: 1.9E-6
score: 25.7
NoneNo IPR availablePANTHERPTHR43601THIOREDOXIN, MITOCHONDRIALcoord: 33..190
NoneNo IPR availablePANTHERPTHR43601:SF10THIOREDOXIN-LIKE 2-2, CHLOROPLASTICcoord: 33..190
NoneNo IPR availableCDDcd02947TRX_familycoord: 102..172
e-value: 7.32398E-17
score: 70.6648
IPR013766Thioredoxin domainPFAMPF00085Thioredoxincoord: 101..174
e-value: 4.0E-15
score: 55.7
IPR013766Thioredoxin domainPROSITEPS51352THIOREDOXIN_2coord: 72..212
score: 9.616159
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 91..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig112contigA-nodosum_M_contig112:36659..40665 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig112.10.1mRNA_A-nodosum_M_contig112.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig112 36466..40914 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig112.10.1 ID=prot_A-nodosum_M_contig112.10.1|Name=mRNA_A-nodosum_M_contig112.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=213bp
MKGHALFATCSFISARTLFAFVAPSLLQLQQPLQSTSRASSHHSRNGRTH
LTSQLIVTVNAPRPALPPGKRMIRRRKAPPSPAPVSDVEIRNAPVEVIRS
ESEYIAILKENEQSLVVIKFFATWCRSCKSMDLKYRRLALEHENVKFYEV
DVLESPELKKAMAVKAVPTVKLHAGSLGEVASFPCGPKKVTVYGTVVVRA
PCSPLSSHYCLI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013766Thioredoxin_domain
IPR036249Thioredoxin-like_sf