prot_A-nodosum_M_contig1119.10.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1119.10.1
Unique Nameprot_A-nodosum_M_contig1119.10.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length498
Homology
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: D7G522_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G522_ECTSI)

HSP 1 Score: 667 bits (1720), Expect = 3.150e-237
Identity = 345/466 (74.03%), Postives = 399/466 (85.62%), Query Frame = 0
Query:   34 IMVNHNEFGVTEEEFQEHGNDEGRVQELLLTKMERFISKHPEAAGDDSIKTLTALAVEEMLLN-NLENARLMYQSVPFLKFFAEHGVEGIKSRSADLERATESVNAVADEQGMLATLRKEVGTACKCLTLEDWERPSK-QEEEPEGLTYAECLAAPFVKIPAKKYNALNQDSRLHVEIRSRLCPPNDKRPYICIIIAPSSRYIFHSFPVEETKADEAFMHVLEGIVMAVVTEGMGMVDEAVRIRPTQLTTTDPLLAKFLSPLLQGTRVSVAASSNKVVNADPEAKTKESPLIAIMDGIFADFNKDIKKPNSRRKLPIGDTMAEEAKWKLKSKTSSGKEKYTVDKEAEEREIPDRVIACKGCNELKIRSEVKQCSLCSEVWYCGNECQASDWSAGHKTECSRKNEGKKRSKGGGHVSEDSGEDLAGQAEKDALRSFAVDLSAVMPPVGGGGGKKRGXXXXXGKGKKK 497
            +MVNHNEFG+TEEEF+EHGNDE  VQ+LLL KM+ FI+KHPEAAGDD+IKTLTALAV+E+LLN NLENARL++Q VPFLKFF EHGV GI SR ADL++ATE VNAVA E GML  L K VG+ CKCLTL     P K QEEEPEGLTYAE LAAPF+KIP KK NA  QDSRLHVEIR RL  P+DK PY+CI+IAP+SRY+FHSFP+EET+AD+AFMHVLEGIVM VVTEGMGM++EAVRIRP QLTTTDPLLA FLSPLL+GTRVSVAASS+KVVNAD +AKTKESPLIAIMDG++ADF  D+ K NS+RKLPIGD M++EA +K+KS+T+SGKEKY  D E E+R+IP++++ACKGCN+LK+RS+VKQCSLC+EVWYCGNECQASDWS GHK +CSRKNEGKK+ KG GHVSEDSG+DL  QA KDAL SFA+DL   +   GGGG KK+    XXGKGKKK
Sbjct:    1 MMVNHNEFGITEEEFEEHGNDEAAVQDLLLQKMKNFITKHPEAAGDDAIKTLTALAVDELLLNGNLENARLVFQPVPFLKFFKEHGVAGIDSRRADLDKATEEVNAVATEAGMLEALTKAVGSNCKCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNATGQDSRLHVEIR-RLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLANFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADFFIDLTKANSKRKLPIGDNMSDEAAFKVKSRTASGKEKYIADPEKEKRKIPEKMMACKGCNQLKLRSQVKQCSLCNEVWYCGNECQASDWSKGHKNDCSRKNEGKKKGKGAGHVSEDSGDDLGDQAAKDALDSFAIDLHKGL---GGGGAKKKASGKXXGKGKKK 462          
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: A0A6H5KRE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRE4_9PHAE)

HSP 1 Score: 307 bits (787), Expect = 1.340e-99
Identity = 160/208 (76.92%), Postives = 180/208 (86.54%), Query Frame = 0
Query:  127 ADLERATESVNAVADEQGMLATLRKEVGTACKCLTLEDWERPSK-QEEEPEGLTYAECLAAPFVKIPAKKYNALNQDSRLHVEIRSRLCPPNDKRPYICIIIAPSSRYIFHSFPVEETKADEAFMHVLEGIVMAVVTEGMGMVDEAVRIRPTQLTTTDPLLAKFLSPLLQGTRVSVAASSNKVVNADPEAKTKESPLIAIMDGIFADF 333
            ADL++A E VNAVA E GML  L K VG+ C CLTL     P K QEEEPEGLTYAE LAAPF+KIP KK NA+ QDSRLHVEIR RL  P+DK PY+CI+IAP+SRY+FHSFP+EET+AD+AFMHVLEGIVM VVTEGMGM++EAVRIRP QLTTTDPLLAKFLSPLL+GTRVSVAASS+KVVNAD +AKTKESPLIAIMDG++ADF
Sbjct:    6 ADLDKAAEEVNAVATEAGMLEALTKAVGSKCNCLTLFTPGNPLKPQEEEPEGLTYAESLAAPFLKIPVKKTNAVGQDSRLHVEIR-RLPAPHDKAPYLCILIAPASRYVFHSFPIEETQADKAFMHVLEGIVMGVVTEGMGMIEEAVRIRPAQLTTTDPLLAKFLSPLLEGTRVSVAASSDKVVNADSDAKTKESPLIAIMDGVYADF 212          
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: A0A395J5I2_9HELO (MYND-type zinc finger protein samB n=1 Tax=Monilinia fructigena TaxID=38457 RepID=A0A395J5I2_9HELO)

HSP 1 Score: 55.8 bits (133), Expect = 1.070e-5
Identity = 21/48 (43.75%), Postives = 30/48 (62.50%), Query Frame = 0
Query:  384 DRVIACKGCNELKIRSEVKQCSLCSEVWYCGNECQASDWSA-GHKTEC 430
            + ++ C+ C+      E+ +C  CSEVWYCG ECQ   W+  GHK+EC
Sbjct:   92 ENLVMCQSCDRKASEEELSRCKGCSEVWYCGKECQTKGWNEKGHKSEC 139          
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: A0A5M9JIY8_MONFR (MYND-type zinc finger protein samB n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9JIY8_MONFR)

HSP 1 Score: 57.4 bits (137), Expect = 1.780e-5
Identity = 24/62 (38.71%), Postives = 35/62 (56.45%), Query Frame = 0
Query:  369 EKYTVDKEAEEREIPDRVIACKGCNELKIRSEVKQCSLCSEVWYCGNECQASDWSA-GHKTE 429
            E++   +E  +   P+ ++AC+ C       E+ +C  CSEVWYCG ECQ   W+  GHK E
Sbjct:  133 ERFVESREGLKENNPENLVACQSCGRKGSEEELSRCKGCSEVWYCGKECQTKGWNEKGHKNE 194          
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: A0A5M9JM15_MONFR (MYND-type zinc finger protein samB n=1 Tax=Monilinia fructicola TaxID=38448 RepID=A0A5M9JM15_MONFR)

HSP 1 Score: 57.4 bits (137), Expect = 1.840e-5
Identity = 24/62 (38.71%), Postives = 35/62 (56.45%), Query Frame = 0
Query:  369 EKYTVDKEAEEREIPDRVIACKGCNELKIRSEVKQCSLCSEVWYCGNECQASDWSA-GHKTE 429
            E++   +E  +   P+ ++AC+ C       E+ +C  CSEVWYCG ECQ   W+  GHK E
Sbjct:  133 ERFVESREGLKENNPENLVACQSCGRKGSEEELSRCKGCSEVWYCGKECQTKGWNEKGHKNE 194          
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Match: A0A1D9QA95_SCLS1 (MYND-type zinc finger protein samB n=2 Tax=Sclerotinia TaxID=5179 RepID=A0A1D9QA95_SCLS1)

HSP 1 Score: 54.7 bits (130), Expect = 8.930e-5
Identity = 21/45 (46.67%), Postives = 27/45 (60.00%), Query Frame = 0
Query:  387 IACKGCNELKIRSEVKQCSLCSEVWYCGNECQASDWSA-GHKTEC 430
            + C+ C       E+ +C  CSEVWYCG ECQ   W+  GHK+EC
Sbjct:  173 VTCQSCERKASEEELSRCKGCSEVWYCGKECQTEGWNIKGHKSEC 217          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1119.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G522_ECTSI3.150e-23774.03MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KRE4_9PHAE1.340e-9976.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A395J5I2_9HELO1.070e-543.75MYND-type zinc finger protein samB n=1 Tax=Monilin... [more]
A0A5M9JIY8_MONFR1.780e-538.71MYND-type zinc finger protein samB n=1 Tax=Monilin... [more]
A0A5M9JM15_MONFR1.840e-538.71MYND-type zinc finger protein samB n=1 Tax=Monilin... [more]
A0A1D9QA95_SCLS18.930e-546.67MYND-type zinc finger protein samB n=2 Tax=Sclerot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002893Zinc finger, MYND-typePFAMPF01753zf-MYNDcoord: 389..430
e-value: 5.2E-9
score: 36.0
IPR002893Zinc finger, MYND-typePROSITEPS01360ZF_MYND_1coord: 389..430
IPR002893Zinc finger, MYND-typePROSITEPS50865ZF_MYND_2coord: 389..430
score: 11.576741
NoneNo IPR availableGENE3D6.10.140.2220coord: 371..437
e-value: 2.4E-10
score: 41.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 465..497
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..460
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 441..459
NoneNo IPR availableSUPERFAMILY144232HIT/MYND zinc finger-likecoord: 388..432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1119contigA-nodosum_M_contig1119:240060..256532 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1119.10.1mRNA_A-nodosum_M_contig1119.10.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1119 239447..256756 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1119.10.1 ID=prot_A-nodosum_M_contig1119.10.1|Name=mRNA_A-nodosum_M_contig1119.10.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=498bp
MPPKRGQKMSNTSPASCRHGGPRATSHILECINIMVNHNEFGVTEEEFQE
HGNDEGRVQELLLTKMERFISKHPEAAGDDSIKTLTALAVEEMLLNNLEN
ARLMYQSVPFLKFFAEHGVEGIKSRSADLERATESVNAVADEQGMLATLR
KEVGTACKCLTLEDWERPSKQEEEPEGLTYAECLAAPFVKIPAKKYNALN
QDSRLHVEIRSRLCPPNDKRPYICIIIAPSSRYIFHSFPVEETKADEAFM
HVLEGIVMAVVTEGMGMVDEAVRIRPTQLTTTDPLLAKFLSPLLQGTRVS
VAASSNKVVNADPEAKTKESPLIAIMDGIFADFNKDIKKPNSRRKLPIGD
TMAEEAKWKLKSKTSSGKEKYTVDKEAEEREIPDRVIACKGCNELKIRSE
VKQCSLCSEVWYCGNECQASDWSAGHKTECSRKNEGKKRSKGGGHVSEDS
GEDLAGQAEKDALRSFAVDLSAVMPPVGGGGGKKRGGGKKKGKGKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002893Znf_MYND