prot_A-nodosum_M_contig11173.1.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig11173.1.1
Unique Nameprot_A-nodosum_M_contig11173.1.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length44
Homology
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: A0A6H5JIQ4_9PHAE (Spindle pole body component n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ4_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 2.530e-16
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            V QDFNTRYWSGRYLLR  HV+A+L  R++KILTTGKYLNVVR
Sbjct:   88 VGQDFNTRYWSGRYLLRPEHVIANLAGRQDKILTTGKYLNVVR 130          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: D8LBZ5_ECTSI (Spindle pole body component n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBZ5_ECTSI)

HSP 1 Score: 75.9 bits (185), Expect = 6.250e-15
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            V QDFNTRYWSGRYLLR  HV+A+L  R++KILTTGKYLNVVR
Sbjct:  852 VGQDFNTRYWSGRYLLRPEHVIANLAGRQDKILTTGKYLNVVR 894          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: W7U244_9STRA (Gamma-tubulin complex component 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U244_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 9.730e-8
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            V +DFN  YW  R  + A HV + L+  K +ILTTGKYLNV+R
Sbjct:  662 VQEDFNAEYWDARSTICAEHVFSVLEEHKPRILTTGKYLNVIR 704          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: A0A7S2RS01_9STRA (Spindle pole body component (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RS01_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 2.410e-7
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            V+ DF T YW  R+ L+ +H+   L + + KILTTGKYLNVVR
Sbjct:   20 VTSDFTTTYWETRFTLQESHIPRFLAAHQHKILTTGKYLNVVR 62          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: F0ZDB7_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZDB7_DICPU)

HSP 1 Score: 53.5 bits (127), Expect = 4.660e-7
Identity = 23/43 (53.49%), Postives = 30/43 (69.77%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            +++DFN  YW  RY+LR N +   L S   K+LTTGKYLNVV+
Sbjct:  487 INRDFNDIYWEERYILRENQIPNYLKSIANKVLTTGKYLNVVK 529          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: A0A835ZJD2_9STRA (Spc98 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJD2_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 8.710e-7
Identity = 23/40 (57.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    4 DFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            DFN +YW GRY ++   V + L +   KILTTGKYLNVVR
Sbjct:  670 DFNAQYWEGRYTIQQPMVASFLQAHAHKILTTGKYLNVVR 709          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: A0A151ZHF0_9MYCE (Spindle pole body component n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZHF0_9MYCE)

HSP 1 Score: 52.8 bits (125), Expect = 8.710e-7
Identity = 22/43 (51.16%), Postives = 31/43 (72.09%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            +++DFN  YW  RYLLR++ +    D   +K+LTTGKYLNV+R
Sbjct:  518 MNRDFNDVYWEQRYLLRSDQIPKFFDQVAKKVLTTGKYLNVMR 560          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: SPC97_DICDI (Spindle pole body component 97 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=SPC97_DICDI)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 23/43 (53.49%), Postives = 29/43 (67.44%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            +++DFN  YW  RY +R + +   L S   KILTTGKYLNVVR
Sbjct:  637 INRDFNDLYWEQRYQIRQDQIPKYLQSHALKILTTGKYLNVVR 679          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: A0A3P3Y4S6_PLABS (Spindle pole body component n=2 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A3P3Y4S6_PLABS)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            + +DFN  YW  RY++R  HV A L     KIL TGKYLNV+R
Sbjct:  624 LERDFNDSYWDERYVVRNEHVPAFLQQFSNKILLTGKYLNVLR 666          
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Match: UPI00189F2556 (gamma-tubulin complex component 2 isoform X1 n=4 Tax=Xenarthra TaxID=9348 RepID=UPI00189F2556)

HSP 1 Score: 52.0 bits (123), Expect = 1.630e-6
Identity = 22/43 (51.16%), Postives = 28/43 (65.12%), Query Frame = 0
Query:    1 VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR 43
            + +D+N RYW  RY +   H+ A L     KIL+TGKYLNVVR
Sbjct:  438 IQEDYNDRYWDQRYTVVQQHIPAFLQKMAGKILSTGKYLNVVR 480          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig11173.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIQ4_9PHAE2.530e-1679.07Spindle pole body component n=1 Tax=Ectocarpus sp.... [more]
D8LBZ5_ECTSI6.250e-1579.07Spindle pole body component n=1 Tax=Ectocarpus sil... [more]
W7U244_9STRA9.730e-853.49Gamma-tubulin complex component 2 n=2 Tax=Monodops... [more]
A0A7S2RS01_9STRA2.410e-753.49Spindle pole body component (Fragment) n=1 Tax=Rhi... [more]
F0ZDB7_DICPU4.660e-753.49Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
A0A835ZJD2_9STRA8.710e-757.50Spc98 family-domain-containing protein n=1 Tax=Tri... [more]
A0A151ZHF0_9MYCE8.710e-751.16Spindle pole body component n=1 Tax=Tieghemosteliu... [more]
SPC97_DICDI1.630e-653.49Spindle pole body component 97 n=1 Tax=Dictyosteli... [more]
A0A3P3Y4S6_PLABS1.630e-653.49Spindle pole body component n=2 Tax=Plasmodiophora... [more]
UPI00189F25561.630e-651.16gamma-tubulin complex component 2 isoform X1 n=4 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig11173contigA-nodosum_M_contig11173:12695..12826 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig11173.1.1mRNA_A-nodosum_M_contig11173.1.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig11173 12695..12826 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig11173.1.1 ID=prot_A-nodosum_M_contig11173.1.1|Name=mRNA_A-nodosum_M_contig11173.1.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=44bp
VSQDFNTRYWSGRYLLRANHVMASLDSRKEKILTTGKYLNVVR*
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