prot_A-nodosum_M_contig1115.6.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1115.6.1
Unique Nameprot_A-nodosum_M_contig1115.6.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length427
Homology
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BLAST of mRNA_A-nodosum_M_contig1115.6.1 vs. uniprot
Match: D7FYD6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYD6_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.710e-74
Identity = 162/316 (51.27%), Postives = 205/316 (64.87%), Query Frame = 0 
Query:  125 RRQFNTQ-RGFPPRRXXPQRVFAGAVFLFLAAWGLLFGAITLLLLPFIGLALYLLRRDFQRGGPSRGLAESVARRMAERADR---------GFPPGAVGGPMAHWMQRAPTEGLLSTVLSQTLGGGIRGMQLVGVLRSEVKNRARRHPGLTSALGGDIEAFSDVEMSTVGTAGGSFGRQSAPAGGSIAGGQGPSRVIKARLRFMGRRSGAGGAGWAEVEVSDWEGQNDKDDTEGLEFDRIVVTLDNGKTFDLSNLDGEHHGRGNGSGDTINSTFTSRG----PTGNWKQTGGKDRQADRRRPKDKRRPVEAEFRDK 426
            RRQ +T  RG    R  P+R+FAG V + LAAWGL+FGAITLLLLPF+G+ L+LLRR+FQRGG SR L   +A++MAER               P   GG     MQR+PTEG LS++ ++ LGGGIRGMQLVGVLRSEV+ RA RHPGL+SALGG IE FSD+E+STV + GG+    S   GG   GG+ PSRV+KA+LRF GRR+GAG   WAEVEV++W G+ +++    +EFDRI VTLDNG+TFDL++       R       + S  T +G    P G+ K+  G+             +PVEAEFRDK
Sbjct:   17 RRQLSTAGRG---GRRLPERIFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLVARLAQKMAERGGSHGXXXXXXXXXXPMMGGGGGTPRMQRSPTEGALSSLFARMLGGGIRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDIEISTVASVGGNSWN-SGGGGGDRRGGE-PSRVVKAKLRFSGRRAGAG---WAEVEVTEWAGREEEE----MEFDRIFVTLDNGRTFDLTSDSFSGDDRVGEGASGVRSRRTVKGRSTSPQGSKKKARGEAGGG---------QPVEAEFRDK 311
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BLAST of mRNA_A-nodosum_M_contig1115.6.1 vs. uniprot
Match: A0A6H5L7D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7D3_9PHAE)

HSP 1 Score: 246 bits (627), Expect = 1.520e-73
Identity = 167/336 (49.70%), Postives = 205/336 (61.01%), Query Frame = 0 
Query:  125 RRQFNTQ-RGFPPRRXXPQRVFAGAVFLFLAAWGLLFGAITLLLLPFIGLALYLLRRDFQRGGPSRGLAESVARRMAERADRGFPPGAVGG-----------------------------PMAHWMQRAPTEGLLSTVLSQTLGGGIRGMQLVGVLRSEVKNRARRHPGLTSALGGDIEAFSDVEMSTVGTAGGSFGRQSAPAGGSIAGGQGPSRVIKARLRFMGRRSGAGGAGWAEVEVSDWEGQNDKDDTEGLEFDRIVVTLDNGKTFDLSN--LDGEHHGRGNGSGDTINSTFTSRG--PTGNWKQTGGKDRQADRRRPKDKRRPVEAEFRDK 426
            RRQ +T  RG  P    P+RVFAG V + LAAWGL+FGAITLLLLPF+G+ L+LLRR+FQRGG SR LA  +A++MAE   RG P G  GG                               A WMQRAPTEG +S++ ++ LGGG+RGMQLVGVLRSEV+ RA RHPGL+SALGG IE FSD+E+STV + GGS       AG    GG  PSRV  A+LRF GRR+GAG   WAEVEV++W G+ +    EG+EFDRI VTLDNG+TFDL++    G+       SG     T + R   P G+     G+             +P+EAEFRDK
Sbjct:  122 RRQLSTSGRGGRP---LPERVFAGLVVVVLAAWGLVFGAITLLLLPFVGIGLFLLRRNFQRGGMSRNLAARLAQKMAE---RGGPHGGGGGLXXXXXXXXXXXXXXXGGXXXXXXXXXXXXXAPWMQRAPTEGAVSSLFARMLGGGLRGMQLVGVLRSEVEKRALRHPGLSSALGGGIENFSDIEISTVDSVGGSSWNSGGGAGDRQGGG--PSRVTNAKLRFSGRRAGAG---WAEVEVTEWGGREE----EGIEFDRIFVTLDNGRTFDLTSDSFSGDDRVGEGASGVRSRRTVSGRSTSPQGSKNNARGEAGGG---------QPIEAEFRDK 433
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1115.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYD6_ECTSI1.710e-7451.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7D3_9PHAE1.520e-7349.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 402..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 369..426
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 379..401

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1115contigA-nodosum_M_contig1115:99705..103600 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1115.6.1mRNA_A-nodosum_M_contig1115.6.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1115 99654..104825 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1115.6.1 ID=prot_A-nodosum_M_contig1115.6.1|Name=mRNA_A-nodosum_M_contig1115.6.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=427bp
MWRCTCHARSHRGASVISRRIDRFANTRSLLSSSRFEQRKTIFLRARSAR
EFERRHRSALQTANFCNSGSSSGSGIVNTRVTAEQVNVLRPRVHSLKGSN
GVAHNLASVRAPPLLGSSFGQEFQRRQFNTQRGFPPRRGFPQRVFAGAVF
LFLAAWGLLFGAITLLLLPFIGLALYLLRRDFQRGGPSRGLAESVARRMA
ERADRGFPPGAVGGPMAHWMQRAPTEGLLSTVLSQTLGGGIRGMQLVGVL
RSEVKNRARRHPGLTSALGGDIEAFSDVEMSTVGTAGGSFGRQSAPAGGS
IAGGQGPSRVIKARLRFMGRRSGAGGAGWAEVEVSDWEGQNDKDDTEGLE
FDRIVVTLDNGKTFDLSNLDGEHHGRGNGSGDTINSTFTSRGPTGNWKQT
GGKDRQADRRRPKDKRRPVEAEFRDK*
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