prot_A-nodosum_M_contig1114.3.1 (polypeptide) Ascophyllum nodosum dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_A-nodosum_M_contig1114.3.1
Unique Nameprot_A-nodosum_M_contig1114.3.1
Typepolypeptide
OrganismAscophyllum nodosum dioecious (Ascophyllum nodosum dioecious (Feamainn bhuX, rockweed, Norwegian kelp, knotted kelp, knotted wrack or egg wrack))
Sequence length57
Homology
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: D8LQS3_ECTSI (Short-chain dehydrogenase/reductase SDR n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQS3_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.810e-13
Identity = 34/57 (59.65%), Postives = 44/57 (77.19%), Query Frame = 0
Query:    1 GGPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEEIAKLVLFLAS 57
            G  SGVRVNS++PGHVETPI+G +  + L  +T  +Q+I R IKPEEIA +V+FLAS
Sbjct:  179 GAASGVRVNSVSPGHVETPIYGEMPRETLVAVTGTTQLIARPIKPEEIANVVIFLAS 235          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: D8LQS1_ECTSI (Short-chain dehydrogenase/reductase SDR n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQS1_ECTSI)

HSP 1 Score: 66.2 bits (160), Expect = 1.380e-11
Identity = 33/57 (57.89%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    1 GGPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEEIAKLVLFLAS 57
            G  SGVRVNS+APG VETPI+G +  D L      +Q++PR   PEEIAK+V+FLAS
Sbjct:  181 GAASGVRVNSVAPGLVETPIFGDMPVDTLVAFAGATQLVPRPCAPEEIAKVVIFLAS 237          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: A0A517VPP7_9PLAN (Glucose 1-dehydrogenase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VPP7_9PLAN)

HSP 1 Score: 60.1 bits (144), Expect = 2.510e-9
Identity = 34/61 (55.74%), Postives = 44/61 (72.13%), Query Frame = 0
Query:    2 GPSGVRVNSIAPGHVETPIWGSI--THDQLAELTKK--SQVIPRVI-KPEEIAKLVLFLAS 57
            GP G+RVNSIAPG VETP+W S+    DQL  + K   S++IP+   KPEEIA++ +FLAS
Sbjct:  170 GPRGIRVNSIAPGPVETPLWKSVGLDADQLQTVAKSINSRLIPQAFGKPEEIAEVAVFLAS 230          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: D7FY92_ECTSI (Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY92_ECTSI)

HSP 1 Score: 56.2 bits (134), Expect = 1.200e-8
Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 0
Query:    1 GGPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEE--IAKLVLFLAS 57
            G  SGVRVNS APG VETPI+G +  D L      +Q++PR    E+  IAK+VLFLAS
Sbjct:   43 GAASGVRVNSFAPGLVETPIFGGMPLDTLVAFAGATQLVPRRCASEQTQIAKVVLFLAS 101          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: A0A6M0K0R2_9GAMM (SDR family oxidoreductase n=1 Tax=Thiorhodococcus minor TaxID=57489 RepID=A0A6M0K0R2_9GAMM)

HSP 1 Score: 57.0 bits (136), Expect = 3.550e-8
Identity = 28/57 (49.12%), Postives = 41/57 (71.93%), Query Frame = 0
Query:    2 GPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPR-VIKPEEIAKLVLFLAS 57
            GP G+RVN +APG V++ +WG  T D + E+T K  V+ + V+KP ++A+ VLFLAS
Sbjct:  180 GPKGIRVNGVAPGVVDSEMWGGAT-DLMREITAKRHVLSQAVVKPADVAEAVLFLAS 235          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: UPI0018817B8A (SDR family oxidoreductase n=1 Tax=Leptolyngbya ectocarpi TaxID=1202 RepID=UPI0018817B8A)

HSP 1 Score: 55.1 bits (131), Expect = 6.770e-8
Identity = 31/57 (54.39%), Postives = 36/57 (63.16%), Query Frame = 0
Query:    6 VRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVI-----KPEEIAKLVLFLAS 57
            +RVN++APG +ETPIW  +   Q A      QVI RV      KPEEIAK VLFLAS
Sbjct:   84 IRVNAVAPGPIETPIWSKMNLPQEAMEQAAQQVISRVPVGRFGKPEEIAKAVLFLAS 140          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: UPI000F772EA3 (glucose 1-dehydrogenase n=1 Tax=Levilactobacillus cerevisiae TaxID=1704076 RepID=UPI000F772EA3)

HSP 1 Score: 55.5 bits (132), Expect = 1.220e-7
Identity = 27/55 (49.09%), Postives = 38/55 (69.09%), Query Frame = 0
Query:    3 PSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEEIAKLVLFLAS 57
            PSGVRVNS+ PG +ETP+       ++ +   K+  + R+ KPEE+AKLVLF+AS
Sbjct:  170 PSGVRVNSVHPGVIETPMISQAGSAEIVKQFAKAIPLRRIAKPEEVAKLVLFVAS 224          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: A0A2E5YEC4_9DELT (3-alpha-hydroxysteroid dehydrogenase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E5YEC4_9DELT)

HSP 1 Score: 55.5 bits (132), Expect = 1.310e-7
Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    2 GPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKS----QVIPRVIKPEEIAKLVLFLAS 57
            G  G+RVNS+ PG V+TP+ G    D+L  + ++     Q IPR+ +PEEIA+LVLFLAS
Sbjct:  171 GQHGIRVNSVHPGGVDTPMLGG---DELGHMAEQDPFAVQPIPRIAQPEEIARLVLFLAS 227          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: A0A7C9TUE5_9CYAN (SDR family oxidoreductase n=1 Tax=Oscillatoria sp. SIO1A7 TaxID=2607767 RepID=A0A7C9TUE5_9CYAN)

HSP 1 Score: 55.1 bits (131), Expect = 1.740e-7
Identity = 32/57 (56.14%), Postives = 35/57 (61.40%), Query Frame = 0
Query:    6 VRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVI-----KPEEIAKLVLFLAS 57
            +RVN+IAPG +ETPIW  I   Q A      QVI R       KPEEIAK VLFLAS
Sbjct:  173 IRVNAIAPGAIETPIWSKIEMPQEAMEQAAQQVIARTPAGRFGKPEEIAKAVLFLAS 229          
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Match: A0A3D4SZI1_9CORY (3-oxoacyl-ACP reductase n=1 Tax=Corynebacterium nuruki TaxID=1032851 RepID=A0A3D4SZI1_9CORY)

HSP 1 Score: 54.7 bits (130), Expect = 2.430e-7
Identity = 27/56 (48.21%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    2 GPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEEIAKLVLFLAS 57
            GP+G+RVNS+ PG+++TP+   +  +Q A L  K   + R+ +PEEIAKLV FL S
Sbjct:  176 GPAGLRVNSVGPGYIDTPLLAGLPDEQKAALVDKHP-LGRLGRPEEIAKLVAFLLS 230          
The following BLAST results are available for this feature:
BLAST of mRNA_A-nodosum_M_contig1114.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQS3_ECTSI1.810e-1359.65Short-chain dehydrogenase/reductase SDR n=2 Tax=Ec... [more]
D8LQS1_ECTSI1.380e-1157.89Short-chain dehydrogenase/reductase SDR n=1 Tax=Ec... [more]
A0A517VPP7_9PLAN2.510e-955.74Glucose 1-dehydrogenase n=2 Tax=Gimesia aquarii Ta... [more]
D7FY92_ECTSI1.200e-854.24Oxidoreductase, short chain dehydrogenase/reductas... [more]
A0A6M0K0R2_9GAMM3.550e-849.12SDR family oxidoreductase n=1 Tax=Thiorhodococcus ... [more]
UPI0018817B8A6.770e-854.39SDR family oxidoreductase n=1 Tax=Leptolyngbya ect... [more]
UPI000F772EA31.220e-749.09glucose 1-dehydrogenase n=1 Tax=Levilactobacillus ... [more]
A0A2E5YEC4_9DELT1.310e-750.003-alpha-hydroxysteroid dehydrogenase n=1 Tax=Delta... [more]
A0A7C9TUE5_9CYAN1.740e-756.14SDR family oxidoreductase n=1 Tax=Oscillatoria sp.... [more]
A0A3D4SZI1_9CORY2.430e-748.213-oxoacyl-ACP reductase n=1 Tax=Corynebacterium nu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002347Short-chain dehydrogenase/reductase SDRPRINTSPR00081GDHRDHcoord: 38..57
score: 36.09
coord: 4..21
score: 42.16
NoneNo IPR availablePFAMPF13561adh_short_C2coord: 2..57
e-value: 2.1E-12
score: 47.1
NoneNo IPR availableGENE3D3.40.50.720coord: 1..57
e-value: 3.5E-13
score: 51.4
NoneNo IPR availableCDDcd05233SDR_ccoord: 2..57
e-value: 3.95003E-13
score: 58.4492
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 2..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
A-nodosum_M_contig1114contigA-nodosum_M_contig1114:7444..8037 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Ascophyllum nodosum dioecious OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_A-nodosum_M_contig1114.3.1mRNA_A-nodosum_M_contig1114.3.1Ascophyllum nodosum dioeciousmRNAA-nodosum_M_contig1114 7444..8038 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_A-nodosum_M_contig1114.3.1 ID=prot_A-nodosum_M_contig1114.3.1|Name=mRNA_A-nodosum_M_contig1114.3.1|organism=Ascophyllum nodosum dioecious|type=polypeptide|length=57bp
GGPSGVRVNSIAPGHVETPIWGSITHDQLAELTKKSQVIPRVIKPEEIAK
LVLFLAS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002347SDR_fam
IPR036291NAD(P)-bd_dom_sf